RNA–Protein interactions for RNA: ENST00000487617.5

HDAC4-209, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 819 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-209ENST00000487617 ING3Q9NXR8 418 aa16.58■□□□□ 0.24
HDAC4-209ENST00000487617 UBE2J1Q9Y385 318 aaPredicted RBP16.58■□□□□ 0.24
HDAC4-209ENST00000487617 TBL2Q9Y4P3 447 aaKnown RBP16.58■□□□□ 0.24
HDAC4-209ENST00000487617 FAM90A8PA6NJQ4 464 aa16.57■□□□□ 0.24
HDAC4-209ENST00000487617 SLC33A1O00400 549 aaPredicted RBP16.57■□□□□ 0.24
HDAC4-209ENST00000487617 CLPXO76031 633 aa16.57■□□□□ 0.24
HDAC4-209ENST00000487617 ALDOBP05062 364 aa16.57■□□□□ 0.24
HDAC4-209ENST00000487617 GLIPR1P48060 266 aa16.57■□□□□ 0.24
HDAC4-209ENST00000487617 TAS2R43P59537 309 aa16.57■□□□□ 0.24
HDAC4-209ENST00000487617 SRSF4Q08170 494 aaKnown RBP16.57■□□□□ 0.24
HDAC4-209ENST00000487617 RSU1Q15404 277 aa16.57■□□□□ 0.24
HDAC4-209ENST00000487617 DDI2Q5TDH0 399 aa16.57■□□□□ 0.24
HDAC4-209ENST00000487617 ZNF626Q68DY1 528 aa16.57■□□□□ 0.24
HDAC4-209ENST00000487617 ORAI1Q96D31 301 aa16.57■□□□□ 0.24
HDAC4-209ENST00000487617 TRBV5-5A0A0J9YX44 114 aa16.56■□□□□ 0.24
HDAC4-209ENST00000487617 PNMA8CA0A1B0GUJ8 204 aa16.56■□□□□ 0.24
HDAC4-209ENST00000487617 H0YJX3 145 aa16.56■□□□□ 0.24
HDAC4-209ENST00000487617 MYL12BO14950 172 aa16.56■□□□□ 0.24
HDAC4-209ENST00000487617 CSN2P05814 226 aa16.56■□□□□ 0.24
HDAC4-209ENST00000487617 C21orf33P30042 268 aaPredicted RBP16.56■□□□□ 0.24
HDAC4-209ENST00000487617 BDKRB2P30411 391 aa16.56■□□□□ 0.24
HDAC4-209ENST00000487617 PTGFRP43088 359 aa16.56■□□□□ 0.24
HDAC4-209ENST00000487617 OR3A4PP47883 348 aa16.56■□□□□ 0.24
HDAC4-209ENST00000487617 Q499Y3 187 aa16.56■□□□□ 0.24
HDAC4-209ENST00000487617 PLA1AQ53H76 456 aa16.56■□□□□ 0.24
HDAC4-209ENST00000487617 YIF1BQ5BJH7 314 aa16.56■□□□□ 0.24
HDAC4-209ENST00000487617 KRBOX4Q5JUW0 171 aa16.56■□□□□ 0.24
HDAC4-209ENST00000487617 FOXRED1Q96CU9 486 aaPredicted RBP16.56■□□□□ 0.24
HDAC4-209ENST00000487617 PGLYRP3Q96LB9 341 aa16.56■□□□□ 0.24
HDAC4-209ENST00000487617 GAL3ST2Q9H3Q3 398 aa16.56■□□□□ 0.24
HDAC4-209ENST00000487617 C16orf95Q9H693 158 aa16.56■□□□□ 0.24
HDAC4-209ENST00000487617 ZNF696Q9H7X3 374 aa16.56■□□□□ 0.24
HDAC4-209ENST00000487617 IGHV2-26A0A0B4J1V2 119 aa16.55■□□□□ 0.24
HDAC4-209ENST00000487617 ODAMA1E959 279 aa16.55■□□□□ 0.24
HDAC4-209ENST00000487617 HSPB6O14558 160 aa16.55■□□□□ 0.24
HDAC4-209ENST00000487617 MMP23AO75900 390 aa16.55■□□□□ 0.24
HDAC4-209ENST00000487617 TSPAN9O75954 239 aa16.55■□□□□ 0.24
HDAC4-209ENST00000487617 HTR3BO95264 441 aa16.55■□□□□ 0.24
HDAC4-209ENST00000487617 ZNF93P35789 620 aaPredicted RBP16.55■□□□□ 0.24
HDAC4-209ENST00000487617 WNT4P56705 351 aa16.55■□□□□ 0.24
HDAC4-209ENST00000487617 RPS11P62280 158 aaKnown RBP eCLIP16.55■□□□□ 0.24
HDAC4-209ENST00000487617 RIPK1Q13546 671 aa16.55■□□□□ 0.24
HDAC4-209ENST00000487617 ATXN7L3Q14CW9 347 aaPredicted RBP16.55■□□□□ 0.24
HDAC4-209ENST00000487617 FAM189A2Q15884 450 aa16.55■□□□□ 0.24
HDAC4-209ENST00000487617 SSX2Q16385 188 aa16.55■□□□□ 0.24
HDAC4-209ENST00000487617 PRR31Q5SQ13 230 aa16.55■□□□□ 0.24
HDAC4-209ENST00000487617 PRAMEF5Q5TYX0 476 aa16.55■□□□□ 0.24
HDAC4-209ENST00000487617 BRICD5Q6PL45 260 aa16.55■□□□□ 0.24
HDAC4-209ENST00000487617 ASCL4Q6XD76 172 aa16.55■□□□□ 0.24
HDAC4-209ENST00000487617 DYNAPQ8N1N2 210 aa16.55■□□□□ 0.24
HDAC4-209ENST00000487617 CORO2AQ92828 525 aa16.55■□□□□ 0.24
HDAC4-209ENST00000487617 MALSU1Q96EH3 234 aa16.55■□□□□ 0.24
HDAC4-209ENST00000487617 COQ2Q96H96 371 aa16.55■□□□□ 0.24
HDAC4-209ENST00000487617 CLEC7AQ9BXN2 247 aa16.55■□□□□ 0.24
HDAC4-209ENST00000487617 TMEM133Q9H2Q1 129 aa16.55■□□□□ 0.24
HDAC4-209ENST00000487617 TAS2R3Q9NYW6 316 aa16.55■□□□□ 0.24
HDAC4-209ENST00000487617 CKLFQ9UBR5 152 aa16.55■□□□□ 0.24
HDAC4-209ENST00000487617 ING4Q9UNL4 249 aa16.55■□□□□ 0.24
HDAC4-209ENST00000487617 CDRT1O95170 752 aa16.54■□□□□ 0.24
HDAC4-209ENST00000487617 IGFBP3P17936 291 aaPredicted RBP16.54■□□□□ 0.24
HDAC4-209ENST00000487617 PROK1P58294 105 aa16.54■□□□□ 0.24
HDAC4-209ENST00000487617 IL13RA2Q14627 380 aa16.54■□□□□ 0.24
HDAC4-209ENST00000487617 PIGYQ3MUY2 71 aa16.54■□□□□ 0.24
HDAC4-209ENST00000487617 PAN3Q58A45 887 aaKnown RBP16.54■□□□□ 0.24
HDAC4-209ENST00000487617 LDLRAD2Q5SZI1 272 aa16.54■□□□□ 0.24
HDAC4-209ENST00000487617 OR51T1Q8NGJ9 327 aa16.54■□□□□ 0.24
HDAC4-209ENST00000487617 PIFOQ8TCI5 191 aa16.54■□□□□ 0.24
HDAC4-209ENST00000487617 METTL9Q9H1A3 318 aa16.54■□□□□ 0.24
HDAC4-209ENST00000487617 RAB18Q9NP72 206 aa16.54■□□□□ 0.24
HDAC4-209ENST00000487617 ABCB10Q9NRK6 738 aa16.54■□□□□ 0.24
HDAC4-209ENST00000487617 FKBP14Q9NWM8 211 aa16.54■□□□□ 0.24
HDAC4-209ENST00000487617 NBEAL1Q6ZS30 2694 aa16.54■□□□□ 0.24
HDAC4-209ENST00000487617 VGLL3A8MV65 326 aa16.53■□□□□ 0.24
HDAC4-209ENST00000487617 CELP19835 753 aa16.53■□□□□ 0.24
HDAC4-209ENST00000487617 CDK2P24941 298 aa16.53■□□□□ 0.24
HDAC4-209ENST00000487617 AQP4P55087 323 aa16.53■□□□□ 0.24
HDAC4-209ENST00000487617 KRTAP10-3P60369 221 aa16.53■□□□□ 0.24
HDAC4-209ENST00000487617 GABPB1Q06547 395 aaPredicted RBP16.53■□□□□ 0.24
HDAC4-209ENST00000487617 MINOS1Q5TGZ0 78 aa16.53■□□□□ 0.24
HDAC4-209ENST00000487617 SLC35E4Q6ICL7 350 aa16.53■□□□□ 0.24
HDAC4-209ENST00000487617 OR52W1Q6IF63 320 aa16.53■□□□□ 0.24
HDAC4-209ENST00000487617 NANOGP1Q8N7R0 232 aa16.53■□□□□ 0.24
HDAC4-209ENST00000487617 Q8NFD4 153 aa16.53■□□□□ 0.24
HDAC4-209ENST00000487617 NDNFQ8TB73 568 aa16.53■□□□□ 0.24
HDAC4-209ENST00000487617 NRG4Q8WWG1 115 aa16.53■□□□□ 0.24
HDAC4-209ENST00000487617 OR14A2Q96R54 314 aa16.53■□□□□ 0.24
HDAC4-209ENST00000487617 S100A13Q99584 98 aa16.53■□□□□ 0.24
HDAC4-209ENST00000487617 ZNF184Q99676 751 aaPredicted RBP16.53■□□□□ 0.24
HDAC4-209ENST00000487617 PPIL3Q9H2H8 161 aaKnown RBP16.53■□□□□ 0.24
HDAC4-209ENST00000487617 OR6C3Q9NZP0 311 aa16.53■□□□□ 0.24
HDAC4-209ENST00000487617 ERGIC3Q9Y282 383 aa16.53■□□□□ 0.24
HDAC4-209ENST00000487617 MINOS1-NBL1R4GNA1 71 aa16.53■□□□□ 0.24
HDAC4-209ENST00000487617 TRAV8-7A0A075B6U6 113 aa16.52■□□□□ 0.24
HDAC4-209ENST00000487617 TRBV5-7A0A0A0MS05 114 aa16.52■□□□□ 0.24
HDAC4-209ENST00000487617 TRAV24A0A0B4J272 114 aa16.52■□□□□ 0.24
HDAC4-209ENST00000487617 A0A1W2PPK0 400 aa16.52■□□□□ 0.24
HDAC4-209ENST00000487617 GPX5O75715 221 aa16.52■□□□□ 0.24
HDAC4-209ENST00000487617 CSTBP04080 98 aaKnown RBP16.52■□□□□ 0.24
HDAC4-209ENST00000487617 RAB13P51153 203 aa16.52■□□□□ 0.24
HDAC4-209ENST00000487617 C6orf141Q5SZD1 244 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms