RNA–Protein interactions for RNA: ENST00000486016.1

GCFC2-209, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 3

Gene GCFC2, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-209ENST00000486016 CPSF4O95639 269 aaKnown RBP1.25□□□□□ -2.21
GCFC2-209ENST00000486016 IGKV1D-33P01593 117 aa1.25□□□□□ -2.21
GCFC2-209ENST00000486016 IGKV1-33P01594 117 aa1.25□□□□□ -2.21
GCFC2-209ENST00000486016 IGHV3-53P01767 116 aa1.25□□□□□ -2.21
GCFC2-209ENST00000486016 IGHMP01871 453 aa1.25□□□□□ -2.21
GCFC2-209ENST00000486016 TPM1P09493 284 aa1.25□□□□□ -2.21
GCFC2-209ENST00000486016 SCGB1C2P0DMR2 95 aa1.25□□□□□ -2.21
GCFC2-209ENST00000486016 CGB3P0DN86 165 aa1.25□□□□□ -2.21
GCFC2-209ENST00000486016 CGB7P0DN87 165 aa1.25□□□□□ -2.21
GCFC2-209ENST00000486016 LCN1P31025 176 aa1.25□□□□□ -2.21
GCFC2-209ENST00000486016 TGFBR2P37173 567 aa1.25□□□□□ -2.21
GCFC2-209ENST00000486016 TTPAP49638 278 aa1.25□□□□□ -2.21
GCFC2-209ENST00000486016 ETV1P50549 477 aa1.25□□□□□ -2.21
GCFC2-209ENST00000486016 FOXA1P55317 472 aa1.25□□□□□ -2.21
GCFC2-209ENST00000486016 VSNL1P62760 191 aa1.25□□□□□ -2.21
GCFC2-209ENST00000486016 ZNF141Q15928 474 aa1.25□□□□□ -2.21
GCFC2-209ENST00000486016 Q3ZCU0 254 aa1.25□□□□□ -2.21
GCFC2-209ENST00000486016 TMEM215Q68D42 235 aa1.25□□□□□ -2.21
GCFC2-209ENST00000486016 HBMQ6B0K9 141 aa1.25□□□□□ -2.21
GCFC2-209ENST00000486016 Q6ZT83 130 aa1.25□□□□□ -2.21
GCFC2-209ENST00000486016 USP50Q70EL3 339 aaPredicted RBP1.25□□□□□ -2.21
GCFC2-209ENST00000486016 SSX6Q7RTT6 188 aa1.25□□□□□ -2.21
GCFC2-209ENST00000486016 DPPA2Q7Z7J5 298 aa1.25□□□□□ -2.21
GCFC2-209ENST00000486016 MARCH3Q86UD3 253 aa1.25□□□□□ -2.21
GCFC2-209ENST00000486016 COMTD1Q86VU5 262 aa1.25□□□□□ -2.21
GCFC2-209ENST00000486016 TRIML2Q8N7C3 387 aa1.25□□□□□ -2.21
GCFC2-209ENST00000486016 CDRT4Q8N9R6 151 aa1.25□□□□□ -2.21
GCFC2-209ENST00000486016 OR2AE1Q8NHA4 323 aa1.25□□□□□ -2.21
GCFC2-209ENST00000486016 SCGB1C1Q8TD33 95 aa1.25□□□□□ -2.21
GCFC2-209ENST00000486016 TWIST2Q8WVJ9 160 aa1.25□□□□□ -2.21
GCFC2-209ENST00000486016 ZMYND19Q96E35 227 aaPredicted RBP1.25□□□□□ -2.21
GCFC2-209ENST00000486016 IGF2BP2-AS1Q96M15 143 aa1.25□□□□□ -2.21
GCFC2-209ENST00000486016 LINC01587Q99440 93 aa1.25□□□□□ -2.21
GCFC2-209ENST00000486016 PKMYT1Q99640 499 aa1.25□□□□□ -2.21
GCFC2-209ENST00000486016 SLC25A31Q9H0C2 315 aa1.25□□□□□ -2.21
GCFC2-209ENST00000486016 ABCG5Q9H222 651 aa1.25□□□□□ -2.21
GCFC2-209ENST00000486016 TMBIM4Q9HC24 238 aa1.25□□□□□ -2.21
GCFC2-209ENST00000486016 AGPAT3Q9NRZ7 376 aa1.25□□□□□ -2.21
GCFC2-209ENST00000486016 C14orf166Q9Y224 244 aaKnown RBP1.25□□□□□ -2.21
GCFC2-209ENST00000486016 DYSFO75923 2080 aa1.25□□□□□ -2.21
GCFC2-209ENST00000486016 ZSWIM8A7E2V4 1837 aa1.24□□□□□ -2.21
GCFC2-209ENST00000486016 CACNA1DQ01668 2161 aa1.24□□□□□ -2.21
GCFC2-209ENST00000486016 A0A0B4J2C4 111 aa1.24□□□□□ -2.21
GCFC2-209ENST00000486016 PGPA6NDG6 321 aa1.24□□□□□ -2.21
GCFC2-209ENST00000486016 LEUTXA8MZ59 168 aa1.24□□□□□ -2.21
GCFC2-209ENST00000486016 D6RAR5 112 aa1.24□□□□□ -2.21
GCFC2-209ENST00000486016 M0QXV9 152 aa1.24□□□□□ -2.21
GCFC2-209ENST00000486016 CDIPTO14735 213 aa1.24□□□□□ -2.21
GCFC2-209ENST00000486016 SHOX2O60902 331 aaPredicted RBP1.24□□□□□ -2.21
GCFC2-209ENST00000486016 DEDDO75618 318 aa1.24□□□□□ -2.21
GCFC2-209ENST00000486016 APOA1P02647 267 aa1.24□□□□□ -2.21
GCFC2-209ENST00000486016 MLNP12872 115 aa1.24□□□□□ -2.21
GCFC2-209ENST00000486016 CNTFRP26992 372 aa1.24□□□□□ -2.21
GCFC2-209ENST00000486016 GTF2H1P32780 548 aa1.24□□□□□ -2.21
GCFC2-209ENST00000486016 ZNF83P51522 516 aa1.24□□□□□ -2.21
GCFC2-209ENST00000486016 UBE2KP61086 200 aa1.24□□□□□ -2.21
GCFC2-209ENST00000486016 TSPAN5P62079 268 aa1.24□□□□□ -2.21
GCFC2-209ENST00000486016 BAXQ07812 192 aa1.24□□□□□ -2.21
GCFC2-209ENST00000486016 TRAM1Q15629 374 aa1.24□□□□□ -2.21
GCFC2-209ENST00000486016 LGALSLQ3ZCW2 172 aaPredicted RBP1.24□□□□□ -2.21
GCFC2-209ENST00000486016 HCP5Q6MZN7 132 aa1.24□□□□□ -2.21
GCFC2-209ENST00000486016 CPNE9Q8IYJ1 553 aa1.24□□□□□ -2.21
GCFC2-209ENST00000486016 RPRMLQ8N4K4 120 aa1.24□□□□□ -2.21
GCFC2-209ENST00000486016 C3orf22Q8N5N4 141 aa1.24□□□□□ -2.21
GCFC2-209ENST00000486016 OR4K17Q8NGC6 315 aa1.24□□□□□ -2.21
GCFC2-209ENST00000486016 OR5P2Q8WZ92 322 aa1.24□□□□□ -2.21
GCFC2-209ENST00000486016 MAL2Q969L2 176 aa1.24□□□□□ -2.21
GCFC2-209ENST00000486016 OLFM3Q96PB7 478 aa1.24□□□□□ -2.21
GCFC2-209ENST00000486016 PITX2Q99697 317 aa1.24□□□□□ -2.21
GCFC2-209ENST00000486016 ULBP1Q9BZM6 244 aa1.24□□□□□ -2.21
GCFC2-209ENST00000486016 GABARAPL1Q9H0R8 117 aa1.24□□□□□ -2.21
GCFC2-209ENST00000486016 RHOFQ9HBH0 211 aa1.24□□□□□ -2.21
GCFC2-209ENST00000486016 MIA3Q5JRA6 1907 aa1.24□□□□□ -2.21
GCFC2-209ENST00000486016 AK9Q5TCS8 1911 aa1.24□□□□□ -2.21
GCFC2-209ENST00000486016 PRR14LQ5THK1 2151 aa1.23□□□□□ -2.21
GCFC2-209ENST00000486016 TRAV8-3A0A0A6YYJ7 113 aa1.23□□□□□ -2.21
GCFC2-209ENST00000486016 GGTLC3B5MD39 225 aa1.23□□□□□ -2.21
GCFC2-209ENST00000486016 H3BMM0 161 aa1.23□□□□□ -2.21
GCFC2-209ENST00000486016 PLPP3O14495 311 aa1.23□□□□□ -2.21
GCFC2-209ENST00000486016 AQP9O43315 295 aa1.23□□□□□ -2.21
GCFC2-209ENST00000486016 PDCD6O75340 191 aa1.23□□□□□ -2.21
GCFC2-209ENST00000486016 CST4P01036 141 aa1.23□□□□□ -2.21
GCFC2-209ENST00000486016 HLA-AP01891 365 aaKnown RBP1.23□□□□□ -2.21
GCFC2-209ENST00000486016 SLC2A1P11166 492 aa1.23□□□□□ -2.21
GCFC2-209ENST00000486016 GTF2F2P13984 249 aa1.23□□□□□ -2.21
GCFC2-209ENST00000486016 GABRA1P14867 456 aa1.23□□□□□ -2.21
GCFC2-209ENST00000486016 ELK4P28324 431 aa1.23□□□□□ -2.21
GCFC2-209ENST00000486016 TSPOP30536 169 aa1.23□□□□□ -2.21
GCFC2-209ENST00000486016 MAGEA3P43357 314 aa1.23□□□□□ -2.21
GCFC2-209ENST00000486016 PLTPP55058 493 aa1.23□□□□□ -2.21
GCFC2-209ENST00000486016 RAB25P57735 213 aa1.23□□□□□ -2.21
GCFC2-209ENST00000486016 HBG1P69891 147 aa1.23□□□□□ -2.21
GCFC2-209ENST00000486016 HBG2P69892 147 aa1.23□□□□□ -2.21
GCFC2-209ENST00000486016 TRIP13Q15645 432 aaPredicted RBP1.23□□□□□ -2.21
GCFC2-209ENST00000486016 PSG3Q16557 428 aa1.23□□□□□ -2.21
GCFC2-209ENST00000486016 CEACAM21Q3KPI0 293 aa1.23□□□□□ -2.21
GCFC2-209ENST00000486016 FBXO48Q5FWF7 155 aa1.23□□□□□ -2.21
GCFC2-209ENST00000486016 NXNL2Q5VZ03 156 aa1.23□□□□□ -2.21
GCFC2-209ENST00000486016 CYHR1Q6ZMK1 362 aa1.23□□□□□ -2.21
GCFC2-209ENST00000486016 Q6ZQT7 251 aa1.23□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms