RNA–Protein interactions for RNA: ENST00000482714.5

CCM2-215, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-215ENST00000482714 C17orf107Q6ZR85 190 aa12.74□□□□□ -0.37
CCM2-215ENST00000482714 FAM216BQ8N7L0 139 aa12.74□□□□□ -0.37
CCM2-215ENST00000482714 FAM46BQ96A09 425 aa12.74□□□□□ -0.37
CCM2-215ENST00000482714 NEDD4LQ96PU5 975 aa12.74□□□□□ -0.37
CCM2-215ENST00000482714 IL36RNQ9UBH0 155 aa12.74□□□□□ -0.37
CCM2-215ENST00000482714 F8P00451 2351 aa12.74□□□□□ -0.37
CCM2-215ENST00000482714 TRBV23-1A0A0A0MS06 115 aa12.73□□□□□ -0.37
CCM2-215ENST00000482714 TRAV24A0A0B4J272 114 aa12.73□□□□□ -0.37
CCM2-215ENST00000482714 TMEM82A0PJX8 343 aa12.73□□□□□ -0.37
CCM2-215ENST00000482714 POM121CA8CG34 1229 aa12.73□□□□□ -0.37
CCM2-215ENST00000482714 MCRIP1C9JLW8 97 aa12.73□□□□□ -0.37
CCM2-215ENST00000482714 GABRR1P24046 479 aa12.73□□□□□ -0.37
CCM2-215ENST00000482714 ASCC1Q8N9N2 400 aaKnown RBP12.73□□□□□ -0.37
CCM2-215ENST00000482714 TMEM185AQ8NFB2 350 aa12.73□□□□□ -0.37
CCM2-215ENST00000482714 RAB40AQ8WXH6 277 aa12.73□□□□□ -0.37
CCM2-215ENST00000482714 ABCG5Q9H222 651 aa12.73□□□□□ -0.37
CCM2-215ENST00000482714 CCDC59Q9P031 241 aaKnown RBP12.73□□□□□ -0.37
CCM2-215ENST00000482714 LPAR3Q9UBY5 353 aa12.73□□□□□ -0.37
CCM2-215ENST00000482714 MTORP42345 2549 aa12.73□□□□□ -0.37
CCM2-215ENST00000482714 TRAV20A0A0B4J274 112 aa12.72□□□□□ -0.37
CCM2-215ENST00000482714 FAM157AC9JC47 383 aa12.72□□□□□ -0.37
CCM2-215ENST00000482714 PSPNO60542 156 aa12.72□□□□□ -0.37
CCM2-215ENST00000482714 PDCD6O75340 191 aa12.72□□□□□ -0.37
CCM2-215ENST00000482714 PAHP00439 452 aa12.72□□□□□ -0.37
CCM2-215ENST00000482714 MSMBP08118 114 aa12.72□□□□□ -0.37
CCM2-215ENST00000482714 CD99P14209 185 aa12.72□□□□□ -0.37
CCM2-215ENST00000482714 SNRPBP14678 240 aaKnown RBP12.72□□□□□ -0.37
CCM2-215ENST00000482714 BLVRBP30043 206 aaPredicted RBP12.72□□□□□ -0.37
CCM2-215ENST00000482714 IL2RGP31785 369 aa12.72□□□□□ -0.37
CCM2-215ENST00000482714 CEBPDP49716 269 aaPredicted RBP12.72□□□□□ -0.37
CCM2-215ENST00000482714 SNU13P55769 128 aaKnown RBP12.72□□□□□ -0.37
CCM2-215ENST00000482714 MEF2CQ06413 473 aaPredicted RBP12.72□□□□□ -0.37
CCM2-215ENST00000482714 PAN3Q58A45 887 aaKnown RBP12.72□□□□□ -0.37
CCM2-215ENST00000482714 ATAD3CQ5T2N8 411 aa12.72□□□□□ -0.37
CCM2-215ENST00000482714 Q6ZTK2 550 aa12.72□□□□□ -0.37
CCM2-215ENST00000482714 GDPD3Q7L5L3 318 aa12.72□□□□□ -0.37
CCM2-215ENST00000482714 SUMF2Q8NBJ7 301 aa12.72□□□□□ -0.37
CCM2-215ENST00000482714 C8orf46Q8TAG6 207 aa12.72□□□□□ -0.37
CCM2-215ENST00000482714 PHF21AQ96BD5 680 aa12.72□□□□□ -0.37
CCM2-215ENST00000482714 S100A16Q96FQ6 103 aaKnown RBP12.72□□□□□ -0.37
CCM2-215ENST00000482714 DPCDQ9BVM2 203 aaPredicted RBP12.72□□□□□ -0.37
CCM2-215ENST00000482714 METRNQ9UJH8 293 aa12.72□□□□□ -0.37
CCM2-215ENST00000482714 PEX16Q9Y5Y5 336 aa12.72□□□□□ -0.37
CCM2-215ENST00000482714 A3GALT2U3KPV4 340 aa12.72□□□□□ -0.37
CCM2-215ENST00000482714 YLPM1P49750 1951 aaKnown RBP12.72□□□□□ -0.37
CCM2-215ENST00000482714 A0A075B6Q4 140 aa12.72□□□□□ -0.37
CCM2-215ENST00000482714 LOC105371242A0A075B767 164 aa12.72□□□□□ -0.37
CCM2-215ENST00000482714 KIR2DS1A0A191URI9 304 aa12.72□□□□□ -0.37
CCM2-215ENST00000482714 A0A1W2PPH5 198 aa12.72□□□□□ -0.37
CCM2-215ENST00000482714 RAB27BO00194 218 aa12.72□□□□□ -0.37
CCM2-215ENST00000482714 SIRPB1O00241 398 aa12.72□□□□□ -0.37
CCM2-215ENST00000482714 INHBBP09529 407 aa12.72□□□□□ -0.37
CCM2-215ENST00000482714 NDUFB7P17568 137 aa12.72□□□□□ -0.37
CCM2-215ENST00000482714 GRK1Q15835 563 aa12.72□□□□□ -0.37
CCM2-215ENST00000482714 SIGIRRQ6IA17 410 aa12.72□□□□□ -0.37
CCM2-215ENST00000482714 CIARTQ8N365 385 aaPredicted RBP12.72□□□□□ -0.37
CCM2-215ENST00000482714 LY6G5BQ8NDX9 201 aa12.72□□□□□ -0.37
CCM2-215ENST00000482714 OR4S1Q8NGB4 309 aa12.72□□□□□ -0.37
CCM2-215ENST00000482714 LGALS14Q8TCE9 139 aa12.72□□□□□ -0.37
CCM2-215ENST00000482714 DCTN5Q9BTE1 182 aa12.72□□□□□ -0.37
CCM2-215ENST00000482714 RIMS4Q9H426 269 aaPredicted RBP12.72□□□□□ -0.37
CCM2-215ENST00000482714 DIABLOQ9NR28 239 aa12.72□□□□□ -0.37
CCM2-215ENST00000482714 PLEKHJ1Q9NW61 149 aa12.72□□□□□ -0.37
CCM2-215ENST00000482714 RHBDL2Q9NX52 303 aa12.72□□□□□ -0.37
CCM2-215ENST00000482714 A0A0B4J203 849 aa12.71□□□□□ -0.38
CCM2-215ENST00000482714 FOXI3A8MTJ6 420 aaPredicted RBP12.71□□□□□ -0.38
CCM2-215ENST00000482714 KIAA1324LA8MWY0 1029 aaPredicted RBP12.71□□□□□ -0.38
CCM2-215ENST00000482714 TPPPO94811 219 aa12.71□□□□□ -0.38
CCM2-215ENST00000482714 APOA1P02647 267 aa12.71□□□□□ -0.38
CCM2-215ENST00000482714 IGHV4-31P0DP07 118 aa12.71□□□□□ -0.38
CCM2-215ENST00000482714 ZFP36P26651 326 aaKnown RBP12.71□□□□□ -0.38
CCM2-215ENST00000482714 CHATP28329 748 aa12.71□□□□□ -0.38
CCM2-215ENST00000482714 OR3A1P47881 315 aa12.71□□□□□ -0.38
CCM2-215ENST00000482714 VEGFCP49767 419 aa12.71□□□□□ -0.38
CCM2-215ENST00000482714 DVL1P1P54792 670 aaPredicted RBP12.71□□□□□ -0.38
CCM2-215ENST00000482714 TMEM50BP56557 158 aa12.71□□□□□ -0.38
CCM2-215ENST00000482714 PDCD1Q15116 288 aa12.71□□□□□ -0.38
CCM2-215ENST00000482714 SLC35E4Q6ICL7 350 aa12.71□□□□□ -0.38
CCM2-215ENST00000482714 C1orf122Q6ZSJ8 110 aa12.71□□□□□ -0.38
CCM2-215ENST00000482714 BTN2A1Q7KYR7 527 aa12.71□□□□□ -0.38
CCM2-215ENST00000482714 ZNF565Q8N9K5 539 aa12.71□□□□□ -0.38
CCM2-215ENST00000482714 OR5H6Q8NGV6 325 aa12.71□□□□□ -0.38
CCM2-215ENST00000482714 OR10R2Q8NGX6 335 aa12.71□□□□□ -0.38
CCM2-215ENST00000482714 ST8SIA4Q92187 359 aa12.71□□□□□ -0.38
CCM2-215ENST00000482714 ATG5Q9H1Y0 275 aa12.71□□□□□ -0.38
CCM2-215ENST00000482714 RPUSD1Q9UJJ7 312 aaKnown RBP12.71□□□□□ -0.38
CCM2-215ENST00000482714 A0A1B0GW55 424 aa12.7□□□□□ -0.38
CCM2-215ENST00000482714 SOCS1O15524 211 aa12.7□□□□□ -0.38
CCM2-215ENST00000482714 PHF1O43189 567 aaPredicted RBP12.7□□□□□ -0.38
CCM2-215ENST00000482714 ENSAO43768 121 aaKnown RBP12.7□□□□□ -0.38
CCM2-215ENST00000482714 TGFAP01135 160 aa12.7□□□□□ -0.38
CCM2-215ENST00000482714 DUX4L2P0CJ85 424 aa12.7□□□□□ -0.38
CCM2-215ENST00000482714 DUX4L3P0CJ86 424 aa12.7□□□□□ -0.38
CCM2-215ENST00000482714 DUX4L4P0CJ87 422 aa12.7□□□□□ -0.38
CCM2-215ENST00000482714 DUX4L5P0CJ88 424 aa12.7□□□□□ -0.38
CCM2-215ENST00000482714 DUX4L6P0CJ89 424 aa12.7□□□□□ -0.38
CCM2-215ENST00000482714 DUX4L7P0CJ90 424 aa12.7□□□□□ -0.38
CCM2-215ENST00000482714 EFNB2P52799 333 aa12.7□□□□□ -0.38
CCM2-215ENST00000482714 SEC61A1P61619 476 aaKnown RBP12.7□□□□□ -0.38
CCM2-215ENST00000482714 PAX2Q02962 417 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms