RNA–Protein interactions for RNA: ENST00000479656.5

APTX-223, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,881 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-223ENST00000479656 NPTNQ9Y639 398 aa9.42□□□□□ -0.9
APTX-223ENST00000479656 ZNF462Q96JM2 2506 aa9.42□□□□□ -0.9
APTX-223ENST00000479656 IGKV1D-8A0A087WSZ0 117 aa9.41□□□□□ -0.9
APTX-223ENST00000479656 NAP1L6A6NFF2 107 aa9.41□□□□□ -0.9
APTX-223ENST00000479656 OR2AT4A6NND4 320 aa9.41□□□□□ -0.9
APTX-223ENST00000479656 PSPNO60542 156 aa9.41□□□□□ -0.9
APTX-223ENST00000479656 PMP2P02689 132 aa9.41□□□□□ -0.9
APTX-223ENST00000479656 CSN2P05814 226 aa9.41□□□□□ -0.9
APTX-223ENST00000479656 FCGR3AP08637 254 aa9.41□□□□□ -0.9
APTX-223ENST00000479656 DANCRP0C864 163 aa9.41□□□□□ -0.9
APTX-223ENST00000479656 LMO1P25800 156 aa9.41□□□□□ -0.9
APTX-223ENST00000479656 PRDX2P32119 198 aa9.41□□□□□ -0.9
APTX-223ENST00000479656 FAUP35544 74 aaKnown RBP9.41□□□□□ -0.9
APTX-223ENST00000479656 RBM39Q14498 530 aaKnown RBP9.41□□□□□ -0.9
APTX-223ENST00000479656 PLA1AQ53H76 456 aa9.41□□□□□ -0.9
APTX-223ENST00000479656 PAN3Q58A45 887 aaKnown RBP9.41□□□□□ -0.9
APTX-223ENST00000479656 CD177Q8N6Q3 437 aa9.41□□□□□ -0.9
APTX-223ENST00000479656 DEFB108BQ8NET1 73 aa9.41□□□□□ -0.9
APTX-223ENST00000479656 BEST4Q8NFU0 473 aa9.41□□□□□ -0.9
APTX-223ENST00000479656 OR4K15Q8NH41 348 aa9.41□□□□□ -0.9
APTX-223ENST00000479656 UBTD1Q9HAC8 227 aa9.41□□□□□ -0.9
APTX-223ENST00000479656 FAIMQ9NVQ4 179 aa9.41□□□□□ -0.9
APTX-223ENST00000479656 ZNF107Q9UII5 783 aaPredicted RBP9.41□□□□□ -0.9
APTX-223ENST00000479656 ANKHD1Q8IWZ3 2542 aaKnown RBP9.41□□□□□ -0.9
APTX-223ENST00000479656 IGKV1D-17A0A075B6S4 117 aa9.4□□□□□ -0.9
APTX-223ENST00000479656 CD74P04233 296 aa9.4□□□□□ -0.9
APTX-223ENST00000479656 GLAP06280 429 aa9.4□□□□□ -0.9
APTX-223ENST00000479656 AMY2BP19961 511 aa9.4□□□□□ -0.9
APTX-223ENST00000479656 DTYMKP23919 212 aa9.4□□□□□ -0.9
APTX-223ENST00000479656 HRH1P35367 487 aa9.4□□□□□ -0.9
APTX-223ENST00000479656 GABRA2P47869 451 aa9.4□□□□□ -0.9
APTX-223ENST00000479656 COL10A1Q03692 680 aa9.4□□□□□ -0.9
APTX-223ENST00000479656 MICBQ29980 383 aa9.4□□□□□ -0.9
APTX-223ENST00000479656 C11orf71Q6IPW1 123 aa9.4□□□□□ -0.9
APTX-223ENST00000479656 ZNF782Q6ZMW2 699 aaPredicted RBP9.4□□□□□ -0.9
APTX-223ENST00000479656 Q6ZPA2 131 aa9.4□□□□□ -0.9
APTX-223ENST00000479656 FAM90A1Q86YD7 464 aa9.4□□□□□ -0.9
APTX-223ENST00000479656 DEDD2Q8WXF8 326 aa9.4□□□□□ -0.9
APTX-223ENST00000479656 SPOCK3Q9BQ16 436 aa9.4□□□□□ -0.9
APTX-223ENST00000479656 CHST6Q9GZX3 395 aa9.4□□□□□ -0.9
APTX-223ENST00000479656 PPA2Q9H2U2 334 aa9.4□□□□□ -0.9
APTX-223ENST00000479656 DPAGT1Q9H3H5 408 aa9.4□□□□□ -0.9
APTX-223ENST00000479656 CHMP1AQ9HD42 196 aaPredicted RBP9.4□□□□□ -0.9
APTX-223ENST00000479656 C12orf4Q9NQ89 552 aa9.4□□□□□ -0.9
APTX-223ENST00000479656 LAMP3Q9UQV4 416 aa9.4□□□□□ -0.9
APTX-223ENST00000479656 PLEKHA6Q9Y2H5 1048 aa9.4□□□□□ -0.9
APTX-223ENST00000479656 CACNA1DQ01668 2161 aa9.4□□□□□ -0.9
APTX-223ENST00000479656 DYSFO75923 2080 aa9.4□□□□□ -0.9
APTX-223ENST00000479656 A1L4Q6 167 aa9.4□□□□□ -0.91
APTX-223ENST00000479656 LRRC30A6NM36 301 aa9.4□□□□□ -0.91
APTX-223ENST00000479656 IFNL4K9M1U5 179 aa9.4□□□□□ -0.91
APTX-223ENST00000479656 TCRBP04435 133 aa9.4□□□□□ -0.91
APTX-223ENST00000479656 AMY2AP04746 511 aa9.4□□□□□ -0.91
APTX-223ENST00000479656 ZNF735P0CB33 412 aa9.4□□□□□ -0.91
APTX-223ENST00000479656 PPOXP50336 477 aa9.4□□□□□ -0.91
APTX-223ENST00000479656 RNASE10Q5GAN6 216 aaKnown RBP9.4□□□□□ -0.91
APTX-223ENST00000479656 PLET1Q6UQ28 207 aa9.4□□□□□ -0.91
APTX-223ENST00000479656 C20orf204Q6ZNR8 217 aa9.4□□□□□ -0.91
APTX-223ENST00000479656 OR51S1Q8NGJ8 323 aa9.4□□□□□ -0.91
APTX-223ENST00000479656 PLPPR1Q8TBJ4 325 aa9.4□□□□□ -0.91
APTX-223ENST00000479656 HPS1Q92902 700 aa9.4□□□□□ -0.91
APTX-223ENST00000479656 SLC6A7Q99884 636 aa9.4□□□□□ -0.91
APTX-223ENST00000479656 TMEM165Q9HC07 324 aa9.4□□□□□ -0.91
APTX-223ENST00000479656 TMEM106BQ9NUM4 274 aa9.4□□□□□ -0.91
APTX-223ENST00000479656 EDARQ9UNE0 448 aa9.4□□□□□ -0.91
APTX-223ENST00000479656 ARFGEF3Q5TH69 2177 aa9.39□□□□□ -0.91
APTX-223ENST00000479656 IGHV1-69-2A0A0G2JMI3 117 aa9.39□□□□□ -0.91
APTX-223ENST00000479656 TMEM82A0PJX8 343 aa9.39□□□□□ -0.91
APTX-223ENST00000479656 LYNX1G3V0Z9 82 aa9.39□□□□□ -0.91
APTX-223ENST00000479656 TMEM178BH3BS89 294 aa9.39□□□□□ -0.91
APTX-223ENST00000479656 CLDN1O95832 211 aa9.39□□□□□ -0.91
APTX-223ENST00000479656 NAPSAO96009 420 aa9.39□□□□□ -0.91
APTX-223ENST00000479656 LYNX1P0DP58 116 aa9.39□□□□□ -0.91
APTX-223ENST00000479656 COL8A2P25067 703 aa9.39□□□□□ -0.91
APTX-223ENST00000479656 ATXN7L3Q14CW9 347 aaPredicted RBP9.39□□□□□ -0.91
APTX-223ENST00000479656 SP5Q6BEB4 398 aaPredicted RBP9.39□□□□□ -0.91
APTX-223ENST00000479656 C17orf107Q6ZR85 190 aa9.39□□□□□ -0.91
APTX-223ENST00000479656 C5orf24Q7Z6I8 188 aa9.39□□□□□ -0.91
APTX-223ENST00000479656 DTX2Q86UW9 622 aa9.39□□□□□ -0.91
APTX-223ENST00000479656 OR5AP2Q8NGF4 316 aa9.39□□□□□ -0.91
APTX-223ENST00000479656 TRAF4Q9BUZ4 470 aaPredicted RBP9.39□□□□□ -0.91
APTX-223ENST00000479656 RAB1BQ9H0U4 201 aa9.39□□□□□ -0.91
APTX-223ENST00000479656 ANXA10Q9UJ72 324 aa9.39□□□□□ -0.91
APTX-223ENST00000479656 TRAV6A0A075B6T7 132 aa9.38□□□□□ -0.91
APTX-223ENST00000479656 OOEPA6NGQ2 149 aa9.38□□□□□ -0.91
APTX-223ENST00000479656 SDCBPO00560 298 aaPredicted RBP9.38□□□□□ -0.91
APTX-223ENST00000479656 GYPAP02724 150 aa9.38□□□□□ -0.91
APTX-223ENST00000479656 PLA2G2AP14555 144 aa9.38□□□□□ -0.91
APTX-223ENST00000479656 OR3A3P47888 321 aa9.38□□□□□ -0.91
APTX-223ENST00000479656 MEF2DQ14814 521 aa9.38□□□□□ -0.91
APTX-223ENST00000479656 CHRFAM7AQ494W8 412 aa9.38□□□□□ -0.91
APTX-223ENST00000479656 SCGB2B2Q4G0G5 96 aa9.38□□□□□ -0.91
APTX-223ENST00000479656 C1orf87Q8N0U7 546 aa9.38□□□□□ -0.91
APTX-223ENST00000479656 ASCC1Q8N9N2 400 aaKnown RBP9.38□□□□□ -0.91
APTX-223ENST00000479656 OR5H2Q8NGV7 314 aa9.38□□□□□ -0.91
APTX-223ENST00000479656 ANGPTL6Q8NI99 470 aa9.38□□□□□ -0.91
APTX-223ENST00000479656 MRPL30Q8TCC3 161 aaKnown RBP9.38□□□□□ -0.91
APTX-223ENST00000479656 CCDC107Q8WV48 283 aa9.38□□□□□ -0.91
APTX-223ENST00000479656 UPRTQ96BW1 309 aa9.38□□□□□ -0.91
APTX-223ENST00000479656 SHARPINQ9H0F6 387 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms