RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 GABRR1P24046 479 aa12.68□□□□□ -0.38
C9orf3-217ENST00000479161 MAP2K4P45985 399 aa12.68□□□□□ -0.38
C9orf3-217ENST00000479161 P2RX3P56373 397 aa12.68□□□□□ -0.38
C9orf3-217ENST00000479161 GRK1Q15835 563 aa12.68□□□□□ -0.38
C9orf3-217ENST00000479161 KCTD21Q4G0X4 260 aa12.68□□□□□ -0.38
C9orf3-217ENST00000479161 HSD17B12Q53GQ0 312 aa12.68□□□□□ -0.38
C9orf3-217ENST00000479161 C1orf100Q5SVJ3 147 aa12.68□□□□□ -0.38
C9orf3-217ENST00000479161 TMEM91Q6ZNR0 172 aa12.68□□□□□ -0.38
C9orf3-217ENST00000479161 CEACAM19Q7Z692 300 aa12.68□□□□□ -0.38
C9orf3-217ENST00000479161 FAM185AQ8N0U4 392 aa12.68□□□□□ -0.38
C9orf3-217ENST00000479161 SPARTQ8N0X7 666 aa12.68□□□□□ -0.38
C9orf3-217ENST00000479161 OSR2Q8N2R0 312 aa12.68□□□□□ -0.38
C9orf3-217ENST00000479161 TMEM86BQ8N661 226 aa12.68□□□□□ -0.38
C9orf3-217ENST00000479161 OR4S1Q8NGB4 309 aa12.68□□□□□ -0.38
C9orf3-217ENST00000479161 FAM216AQ8WUB2 273 aa12.68□□□□□ -0.38
C9orf3-217ENST00000479161 ORAI1Q96D31 301 aa12.68□□□□□ -0.38
C9orf3-217ENST00000479161 HEXA-AS1Q9H8Q6 139 aa12.68□□□□□ -0.38
C9orf3-217ENST00000479161 ELL3Q9HB65 397 aaPredicted RBP12.68□□□□□ -0.38
C9orf3-217ENST00000479161 BATF3Q9NR55 127 aa12.68□□□□□ -0.38
C9orf3-217ENST00000479161 UBE2J1Q9Y385 318 aaPredicted RBP12.68□□□□□ -0.38
C9orf3-217ENST00000479161 A0A1W2PPK0 400 aa12.67□□□□□ -0.38
C9orf3-217ENST00000479161 MAGEA13PA6NCF6 341 aa12.67□□□□□ -0.38
C9orf3-217ENST00000479161 RNASEK-C17orf49H0YIS7 233 aa12.67□□□□□ -0.38
C9orf3-217ENST00000479161 TRIM77I1YAP6 450 aa12.67□□□□□ -0.38
C9orf3-217ENST00000479161 VENTXO95231 258 aa12.67□□□□□ -0.38
C9orf3-217ENST00000479161 ZNF44P15621 663 aa12.67□□□□□ -0.38
C9orf3-217ENST00000479161 DUSP1P28562 367 aa12.67□□□□□ -0.38
C9orf3-217ENST00000479161 PSMD7P51665 324 aa12.67□□□□□ -0.38
C9orf3-217ENST00000479161 RBM11P57052 281 aaKnown RBP12.67□□□□□ -0.38
C9orf3-217ENST00000479161 ERVFRD-1P60508 538 aa12.67□□□□□ -0.38
C9orf3-217ENST00000479161 MIDNQ504T8 468 aa12.67□□□□□ -0.38
C9orf3-217ENST00000479161 GLT8D1Q68CQ7 371 aa12.67□□□□□ -0.38
C9orf3-217ENST00000479161 ZNF773Q6PK81 442 aa12.67□□□□□ -0.38
C9orf3-217ENST00000479161 LRRTM1Q86UE6 522 aa12.67□□□□□ -0.38
C9orf3-217ENST00000479161 BCL6BQ8N143 479 aaPredicted RBP12.67□□□□□ -0.38
C9orf3-217ENST00000479161 SPATA3Q8NHX4 192 aa12.67□□□□□ -0.38
C9orf3-217ENST00000479161 LHX4Q969G2 390 aa12.67□□□□□ -0.38
C9orf3-217ENST00000479161 C1orf147Q96MC9 270 aaPredicted RBP12.67□□□□□ -0.38
C9orf3-217ENST00000479161 FAM192AQ9GZU8 254 aa12.67□□□□□ -0.38
C9orf3-217ENST00000479161 SLITRK2Q9H156 845 aa12.67□□□□□ -0.38
C9orf3-217ENST00000479161 SPACA1Q9HBV2 294 aa12.67□□□□□ -0.38
C9orf3-217ENST00000479161 NDUFB11Q9NX14 153 aa12.67□□□□□ -0.38
C9orf3-217ENST00000479161 TAS2R3Q9NYW6 316 aa12.67□□□□□ -0.38
C9orf3-217ENST00000479161 ING4Q9UNL4 249 aa12.67□□□□□ -0.38
C9orf3-217ENST00000479161 ST3GAL6Q9Y274 331 aa12.67□□□□□ -0.38
C9orf3-217ENST00000479161 MRPS28Q9Y2Q9 187 aaKnown RBP12.67□□□□□ -0.38
C9orf3-217ENST00000479161 RGS9O75916 674 aaPredicted RBP12.66□□□□□ -0.38
C9orf3-217ENST00000479161 CDRT1O95170 752 aa12.66□□□□□ -0.38
C9orf3-217ENST00000479161 HTR3BO95264 441 aa12.66□□□□□ -0.38
C9orf3-217ENST00000479161 MAS1P04201 325 aa12.66□□□□□ -0.38
C9orf3-217ENST00000479161 GLAP06280 429 aa12.66□□□□□ -0.38
C9orf3-217ENST00000479161 EDDM3BP56851 147 aa12.66□□□□□ -0.38
C9orf3-217ENST00000479161 ZNF273Q14593 569 aa12.66□□□□□ -0.38
C9orf3-217ENST00000479161 JAGN1Q8N5M9 183 aa12.66□□□□□ -0.38
C9orf3-217ENST00000479161 SIGLECL1Q8N7X8 197 aa12.66□□□□□ -0.38
C9orf3-217ENST00000479161 ZDHHC22Q8N966 263 aa12.66□□□□□ -0.38
C9orf3-217ENST00000479161 OR4M1Q8NGD0 313 aa12.66□□□□□ -0.38
C9orf3-217ENST00000479161 ZNF48Q96MX3 618 aaPredicted RBP12.66□□□□□ -0.38
C9orf3-217ENST00000479161 ZNF714Q96N38 554 aa12.66□□□□□ -0.38
C9orf3-217ENST00000479161 MDFIQ99750 246 aa12.66□□□□□ -0.38
C9orf3-217ENST00000479161 PPIL3Q9H2H8 161 aaKnown RBP12.66□□□□□ -0.38
C9orf3-217ENST00000479161 STAB1Q9NY15 2570 aa12.65□□□□□ -0.38
C9orf3-217ENST00000479161 TRAV24A0A0B4J272 114 aa12.65□□□□□ -0.38
C9orf3-217ENST00000479161 TRDV1A0A1B0GX56 115 aa12.65□□□□□ -0.38
C9orf3-217ENST00000479161 SIRPB1O00241 398 aa12.65□□□□□ -0.38
C9orf3-217ENST00000479161 CCRL2O00421 344 aa12.65□□□□□ -0.38
C9orf3-217ENST00000479161 RPS25P62851 125 aaKnown RBP12.65□□□□□ -0.38
C9orf3-217ENST00000479161 INSL4Q14641 139 aa12.65□□□□□ -0.38
C9orf3-217ENST00000479161 SSX1Q16384 188 aa12.65□□□□□ -0.38
C9orf3-217ENST00000479161 KRTAP24-1Q3LI83 254 aa12.65□□□□□ -0.38
C9orf3-217ENST00000479161 FAM27D1Q5T7N8 215 aa12.65□□□□□ -0.38
C9orf3-217ENST00000479161 HCP5Q6MZN7 132 aa12.65□□□□□ -0.38
C9orf3-217ENST00000479161 GLIPR1L1Q6UWM5 242 aa12.65□□□□□ -0.38
C9orf3-217ENST00000479161 BRD3OSQ6XYD6 125 aa12.65□□□□□ -0.38
C9orf3-217ENST00000479161 Q6YL49 198 aa12.65□□□□□ -0.38
C9orf3-217ENST00000479161 TCF23Q7RTU1 214 aa12.65□□□□□ -0.38
C9orf3-217ENST00000479161 LDLRAD3Q86YD5 345 aa12.65□□□□□ -0.38
C9orf3-217ENST00000479161 PIP4P2Q8N4L2 257 aa12.65□□□□□ -0.38
C9orf3-217ENST00000479161 OR4D6Q8NGJ1 314 aa12.65□□□□□ -0.38
C9orf3-217ENST00000479161 C22orf15Q8WYQ4 148 aa12.65□□□□□ -0.38
C9orf3-217ENST00000479161 MUL1Q969V5 352 aa12.65□□□□□ -0.38
C9orf3-217ENST00000479161 BARHL1Q9BZE3 327 aa12.65□□□□□ -0.38
C9orf3-217ENST00000479161 LINC00574Q9H8X3 128 aa12.65□□□□□ -0.38
C9orf3-217ENST00000479161 SIRT7Q9NRC8 400 aa12.65□□□□□ -0.38
C9orf3-217ENST00000479161 OR6C3Q9NZP0 311 aa12.65□□□□□ -0.38
C9orf3-217ENST00000479161 POMT1Q9Y6A1 747 aa12.65□□□□□ -0.38
C9orf3-217ENST00000479161 TRGV10A0A0A0MS01 117 aa12.64□□□□□ -0.39
C9orf3-217ENST00000479161 TRAV1-2A0A0B4J238 106 aa12.64□□□□□ -0.39
C9orf3-217ENST00000479161 ODAMA1E959 279 aa12.64□□□□□ -0.39
C9orf3-217ENST00000479161 RNF212BA8MTL3 300 aa12.64□□□□□ -0.39
C9orf3-217ENST00000479161 NPFFO15130 113 aa12.64□□□□□ -0.39
C9orf3-217ENST00000479161 SLC22A1O15245 554 aa12.64□□□□□ -0.39
C9orf3-217ENST00000479161 CALCBP10092 127 aa12.64□□□□□ -0.39
C9orf3-217ENST00000479161 CFPP27918 469 aa12.64□□□□□ -0.39
C9orf3-217ENST00000479161 RPL15P61313 204 aaKnown RBP12.64□□□□□ -0.39
C9orf3-217ENST00000479161 FABP5Q01469 135 aa12.64□□□□□ -0.39
C9orf3-217ENST00000479161 AANATQ16613 207 aa12.64□□□□□ -0.39
C9orf3-217ENST00000479161 DEFB112Q30KQ8 113 aa12.64□□□□□ -0.39
C9orf3-217ENST00000479161 SLC22A6Q4U2R8 563 aa12.64□□□□□ -0.39
C9orf3-217ENST00000479161 SYT6Q5T7P8 510 aaPredicted RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms