RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 ZNF100Q8IYN0 542 aa4.27□□□□□ -1.73
SF3B6-202ENST00000478050 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.27□□□□□ -1.73
SF3B6-202ENST00000478050 POC1AQ8NBT0 407 aa4.27□□□□□ -1.73
SF3B6-202ENST00000478050 SLC30A7Q8NEW0 376 aa4.27□□□□□ -1.73
SF3B6-202ENST00000478050 OR5D18Q8NGL1 313 aa4.27□□□□□ -1.73
SF3B6-202ENST00000478050 OR14L1PQ8NHC6 308 aa4.27□□□□□ -1.73
SF3B6-202ENST00000478050 NPRL2Q8WTW4 380 aa4.27□□□□□ -1.73
SF3B6-202ENST00000478050 ARL11Q969Q4 196 aa4.27□□□□□ -1.73
SF3B6-202ENST00000478050 RAB24Q969Q5 203 aa4.27□□□□□ -1.73
SF3B6-202ENST00000478050 MARC2Q969Z3 335 aa4.27□□□□□ -1.73
SF3B6-202ENST00000478050 TMEM45BQ96B21 275 aa4.27□□□□□ -1.73
SF3B6-202ENST00000478050 FBXO17Q96EF6 278 aa4.27□□□□□ -1.73
SF3B6-202ENST00000478050 PIK3IP1Q96FE7 263 aa4.27□□□□□ -1.73
SF3B6-202ENST00000478050 BORCS8Q96FH0 119 aa4.27□□□□□ -1.73
SF3B6-202ENST00000478050 REEP6Q96HR9 211 aa4.27□□□□□ -1.73
SF3B6-202ENST00000478050 ZC3H10Q96K80 434 aaKnown RBP4.27□□□□□ -1.73
SF3B6-202ENST00000478050 AQP10Q96PS8 301 aa4.27□□□□□ -1.73
SF3B6-202ENST00000478050 SYT3Q9BQG1 590 aa4.27□□□□□ -1.73
SF3B6-202ENST00000478050 ZPBPQ9BS86 351 aa4.27□□□□□ -1.73
SF3B6-202ENST00000478050 RNF126Q9BV68 326 aa4.27□□□□□ -1.73
SF3B6-202ENST00000478050 ST6GALNAC5Q9BVH7 336 aa4.27□□□□□ -1.73
SF3B6-202ENST00000478050 C1QTNF6Q9BXI9 259 aa4.27□□□□□ -1.73
SF3B6-202ENST00000478050 METTL8Q9H825 291 aaKnown RBP4.27□□□□□ -1.73
SF3B6-202ENST00000478050 GPR173Q9NS66 373 aa4.27□□□□□ -1.73
SF3B6-202ENST00000478050 ZNF701Q9NV72 531 aaPredicted RBP4.27□□□□□ -1.73
SF3B6-202ENST00000478050 PLEKHJ1Q9NW61 149 aa4.27□□□□□ -1.73
SF3B6-202ENST00000478050 IL36GQ9NZH8 169 aa4.27□□□□□ -1.73
SF3B6-202ENST00000478050 LUZP4Q9P127 313 aa4.27□□□□□ -1.73
SF3B6-202ENST00000478050 ATPIF1Q9UII2 106 aa4.27□□□□□ -1.73
SF3B6-202ENST00000478050 TIMM10BQ9Y5J6 103 aa4.27□□□□□ -1.73
SF3B6-202ENST00000478050 USP9YO00507 2555 aaPredicted RBP4.27□□□□□ -1.73
SF3B6-202ENST00000478050 COL12A1Q99715 3063 aa4.27□□□□□ -1.73
SF3B6-202ENST00000478050 RTTNQ86VV8 2226 aa4.26□□□□□ -1.73
SF3B6-202ENST00000478050 SDK2Q58EX2 2172 aa4.26□□□□□ -1.73
SF3B6-202ENST00000478050 CCDC187A0A096LP49 1063 aa4.26□□□□□ -1.73
SF3B6-202ENST00000478050 CRYM-AS1A6NIL9 109 aa4.26□□□□□ -1.73
SF3B6-202ENST00000478050 LRRC3CA6NJW4 275 aa4.26□□□□□ -1.73
SF3B6-202ENST00000478050 MPTX1A8MV57 137 aa4.26□□□□□ -1.73
SF3B6-202ENST00000478050 PATE3B3GLJ2 98 aa4.26□□□□□ -1.73
SF3B6-202ENST00000478050 H0YIZ8 118 aa4.26□□□□□ -1.73
SF3B6-202ENST00000478050 SDCBPO00560 298 aaPredicted RBP4.26□□□□□ -1.73
SF3B6-202ENST00000478050 CDX4O14627 284 aaPredicted RBP4.26□□□□□ -1.73
SF3B6-202ENST00000478050 CXCL13O43927 109 aa4.26□□□□□ -1.73
SF3B6-202ENST00000478050 CYTIPO60759 359 aa4.26□□□□□ -1.73
SF3B6-202ENST00000478050 ADAP1O75689 374 aa4.26□□□□□ -1.73
SF3B6-202ENST00000478050 FARS2O95363 451 aaKnown RBP4.26□□□□□ -1.73
SF3B6-202ENST00000478050 IFNA2P01563 188 aa4.26□□□□□ -1.73
SF3B6-202ENST00000478050 IFNA21P01568 189 aa4.26□□□□□ -1.73
SF3B6-202ENST00000478050 SERPINA7P05543 415 aa4.26□□□□□ -1.73
SF3B6-202ENST00000478050 ZNF883P0CG24 379 aa4.26□□□□□ -1.73
SF3B6-202ENST00000478050 CD79AP11912 226 aa4.26□□□□□ -1.73
SF3B6-202ENST00000478050 GLRA1P23415 457 aa4.26□□□□□ -1.73
SF3B6-202ENST00000478050 GABRR1P24046 479 aa4.26□□□□□ -1.73
SF3B6-202ENST00000478050 ACP1P24666 158 aa4.26□□□□□ -1.73
SF3B6-202ENST00000478050 ACKR3P25106 362 aa4.26□□□□□ -1.73
SF3B6-202ENST00000478050 CHATP28329 748 aa4.26□□□□□ -1.73
SF3B6-202ENST00000478050 OTX2P32243 289 aa4.26□□□□□ -1.73
SF3B6-202ENST00000478050 FUT6P51993 359 aa4.26□□□□□ -1.73
SF3B6-202ENST00000478050 IL15RAQ13261 267 aa4.26□□□□□ -1.73
SF3B6-202ENST00000478050 BTN1A1Q13410 526 aa4.26□□□□□ -1.73
SF3B6-202ENST00000478050 ZNF273Q14593 569 aa4.26□□□□□ -1.73
SF3B6-202ENST00000478050 OR8B8Q15620 311 aa4.26□□□□□ -1.73
SF3B6-202ENST00000478050 SNAI3Q3KNW1 292 aa4.26□□□□□ -1.73
SF3B6-202ENST00000478050 ANKRD55Q3KP44 614 aa4.26□□□□□ -1.73
SF3B6-202ENST00000478050 NRN1LQ496H8 165 aa4.26□□□□□ -1.73
SF3B6-202ENST00000478050 PXDC1Q5TGL8 231 aa4.26□□□□□ -1.73
SF3B6-202ENST00000478050 TMEM42Q69YG0 159 aa4.26□□□□□ -1.73
SF3B6-202ENST00000478050 ZNF774Q6NX45 483 aa4.26□□□□□ -1.73
SF3B6-202ENST00000478050 RPUSD3Q6P087 351 aaKnown RBP4.26□□□□□ -1.73
SF3B6-202ENST00000478050 TEPPQ6URK8 271 aa4.26□□□□□ -1.73
SF3B6-202ENST00000478050 PCSK4Q6UW60 755 aa4.26□□□□□ -1.73
SF3B6-202ENST00000478050 UNQ6126/PRO20091Q6UXV3 157 aa4.26□□□□□ -1.73
SF3B6-202ENST00000478050 IL34Q6ZMJ4 242 aa4.26□□□□□ -1.73
SF3B6-202ENST00000478050 GALNTL5Q7Z4T8 443 aa4.26□□□□□ -1.73
SF3B6-202ENST00000478050 C6orf201Q7Z4U5 140 aa4.26□□□□□ -1.73
SF3B6-202ENST00000478050 ESX1Q8N693 406 aa4.26□□□□□ -1.73
SF3B6-202ENST00000478050 ZSCAN4Q8NAM6 433 aaPredicted RBP4.26□□□□□ -1.73
SF3B6-202ENST00000478050 OR1S2Q8NGQ3 325 aa4.26□□□□□ -1.73
SF3B6-202ENST00000478050 OR10D3Q8NH80 312 aa4.26□□□□□ -1.73
SF3B6-202ENST00000478050 FNDC9Q8TBE3 224 aa4.26□□□□□ -1.73
SF3B6-202ENST00000478050 CT55Q8WUE5 264 aa4.26□□□□□ -1.73
SF3B6-202ENST00000478050 CPNE4Q96A23 557 aaPredicted RBP4.26□□□□□ -1.73
SF3B6-202ENST00000478050 SAT2Q96F10 170 aaPredicted RBP4.26□□□□□ -1.73
SF3B6-202ENST00000478050 ADGRG7Q96K78 797 aa4.26□□□□□ -1.73
SF3B6-202ENST00000478050 CMSS1Q9BQ75 279 aaKnown RBP4.26□□□□□ -1.73
SF3B6-202ENST00000478050 ZNF2Q9BSG1 426 aaPredicted RBP4.26□□□□□ -1.73
SF3B6-202ENST00000478050 LINC00470Q9BZP3 86 aa4.26□□□□□ -1.73
SF3B6-202ENST00000478050 STRADBQ9C0K7 418 aa4.26□□□□□ -1.73
SF3B6-202ENST00000478050 OR2H1Q9GZK4 316 aa4.26□□□□□ -1.73
SF3B6-202ENST00000478050 SLC6A15Q9H2J7 730 aa4.26□□□□□ -1.73
SF3B6-202ENST00000478050 BCO1Q9HAY6 547 aa4.26□□□□□ -1.73
SF3B6-202ENST00000478050 ZNF286AQ9HBT8 521 aa4.26□□□□□ -1.73
SF3B6-202ENST00000478050 CRLF2Q9HC73 371 aa4.26□□□□□ -1.73
SF3B6-202ENST00000478050 GPR35Q9HC97 309 aa4.26□□□□□ -1.73
SF3B6-202ENST00000478050 MMP26Q9NRE1 261 aa4.26□□□□□ -1.73
SF3B6-202ENST00000478050 CYTL1Q9NRR1 136 aa4.26□□□□□ -1.73
SF3B6-202ENST00000478050 ZFP57Q9NU63 452 aa4.26□□□□□ -1.73
SF3B6-202ENST00000478050 DECR2Q9NUI1 292 aa4.26□□□□□ -1.73
SF3B6-202ENST00000478050 TMEM100Q9NV29 134 aa4.26□□□□□ -1.73
SF3B6-202ENST00000478050 ASF1BQ9NVP2 202 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms