RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 SPSB1Q96BD6 273 aa3.43□□□□□ -1.86
TMEM39A-204ENST00000468545 SEH1LQ96EE3 360 aa3.43□□□□□ -1.86
TMEM39A-204ENST00000468545 DIRAS2Q96HU8 199 aa3.43□□□□□ -1.86
TMEM39A-204ENST00000468545 TECTBQ96PL2 329 aa3.43□□□□□ -1.86
TMEM39A-204ENST00000468545 OR2V2Q96R30 315 aa3.43□□□□□ -1.86
TMEM39A-204ENST00000468545 TSC22D3Q99576 134 aa3.43□□□□□ -1.86
TMEM39A-204ENST00000468545 UQCC2Q9BRT2 126 aa3.43□□□□□ -1.86
TMEM39A-204ENST00000468545 TM2D2Q9BX73 214 aa3.43□□□□□ -1.86
TMEM39A-204ENST00000468545 SELENOIQ9C0D9 397 aa3.43□□□□□ -1.86
TMEM39A-204ENST00000468545 SLIRPQ9GZT3 109 aaKnown RBP3.43□□□□□ -1.86
TMEM39A-204ENST00000468545 EGLN1Q9GZT9 426 aa3.43□□□□□ -1.86
TMEM39A-204ENST00000468545 ATG5Q9H1Y0 275 aa3.43□□□□□ -1.86
TMEM39A-204ENST00000468545 MMP27Q9H306 513 aa3.43□□□□□ -1.86
TMEM39A-204ENST00000468545 CBLN4Q9NTU7 201 aa3.43□□□□□ -1.86
TMEM39A-204ENST00000468545 PTTG2Q9NZH5 202 aa3.43□□□□□ -1.86
TMEM39A-204ENST00000468545 CCDC59Q9P031 241 aaKnown RBP3.43□□□□□ -1.86
TMEM39A-204ENST00000468545 ABRACLQ9P1F3 81 aa3.43□□□□□ -1.86
TMEM39A-204ENST00000468545 OR14J1Q9UGF5 321 aa3.43□□□□□ -1.86
TMEM39A-204ENST00000468545 OR5V1Q9UGF6 321 aa3.43□□□□□ -1.86
TMEM39A-204ENST00000468545 PEX16Q9Y5Y5 336 aa3.43□□□□□ -1.86
TMEM39A-204ENST00000468545 TRAV18A0A075B6X5 111 aa3.42□□□□□ -1.86
TMEM39A-204ENST00000468545 IGHV3OR15-7A0A075B7D8 119 aa3.42□□□□□ -1.86
TMEM39A-204ENST00000468545 IGKV1-12A0A0C4DH73 117 aa3.42□□□□□ -1.86
TMEM39A-204ENST00000468545 LRP5LA4QPB2 252 aa3.42□□□□□ -1.86
TMEM39A-204ENST00000468545 FABP12A6NFH5 140 aa3.42□□□□□ -1.86
TMEM39A-204ENST00000468545 TRIM64BA6NI03 449 aa3.42□□□□□ -1.86
TMEM39A-204ENST00000468545 OR5B21A6NL26 309 aa3.42□□□□□ -1.86
TMEM39A-204ENST00000468545 TMEM210A6NLX4 147 aa3.42□□□□□ -1.86
TMEM39A-204ENST00000468545 F8VVB4 439 aa3.42□□□□□ -1.86
TMEM39A-204ENST00000468545 F8VWA3 439 aa3.42□□□□□ -1.86
TMEM39A-204ENST00000468545 WNT9BO14905 357 aa3.42□□□□□ -1.86
TMEM39A-204ENST00000468545 CTAG2O75638 210 aa3.42□□□□□ -1.86
TMEM39A-204ENST00000468545 LY6HO94772 140 aa3.42□□□□□ -1.86
TMEM39A-204ENST00000468545 KDM4BO94953 1096 aa3.42□□□□□ -1.86
TMEM39A-204ENST00000468545 CYB5R3P00387 301 aaPredicted RBP3.42□□□□□ -1.86
TMEM39A-204ENST00000468545 IGKV1D-12P01611 117 aa3.42□□□□□ -1.86
TMEM39A-204ENST00000468545 CD8AP01732 235 aa3.42□□□□□ -1.86
TMEM39A-204ENST00000468545 TFF1P04155 84 aa3.42□□□□□ -1.86
TMEM39A-204ENST00000468545 EIF4EP06730 217 aaKnown RBP3.42□□□□□ -1.86
TMEM39A-204ENST00000468545 FCER2P06734 321 aa3.42□□□□□ -1.86
TMEM39A-204ENST00000468545 SFTPBP07988 381 aa3.42□□□□□ -1.86
TMEM39A-204ENST00000468545 SOD3P08294 240 aa3.42□□□□□ -1.86
TMEM39A-204ENST00000468545 PRKACAP17612 351 aa3.42□□□□□ -1.86
TMEM39A-204ENST00000468545 ELK1P19419 428 aa3.42□□□□□ -1.86
TMEM39A-204ENST00000468545 GLRA1P23415 457 aa3.42□□□□□ -1.86
TMEM39A-204ENST00000468545 GABRR1P24046 479 aa3.42□□□□□ -1.86
TMEM39A-204ENST00000468545 COL8A2P25067 703 aa3.42□□□□□ -1.86
TMEM39A-204ENST00000468545 TNFSF8P32971 234 aa3.42□□□□□ -1.86
TMEM39A-204ENST00000468545 CD80P33681 288 aa3.42□□□□□ -1.86
TMEM39A-204ENST00000468545 TALDO1P37837 337 aa3.42□□□□□ -1.86
TMEM39A-204ENST00000468545 PMELP40967 661 aa3.42□□□□□ -1.86
TMEM39A-204ENST00000468545 CD200P41217 278 aa3.42□□□□□ -1.86
TMEM39A-204ENST00000468545 GABRA2P47869 451 aa3.42□□□□□ -1.86
TMEM39A-204ENST00000468545 PCP4P48539 62 aa3.42□□□□□ -1.86
TMEM39A-204ENST00000468545 PITPNBP48739 271 aa3.42□□□□□ -1.86
TMEM39A-204ENST00000468545 EVX1P49640 407 aa3.42□□□□□ -1.86
TMEM39A-204ENST00000468545 VEGFCP49767 419 aa3.42□□□□□ -1.86
TMEM39A-204ENST00000468545 ZP1P60852 638 aa3.42□□□□□ -1.86
TMEM39A-204ENST00000468545 TLE4Q04727 773 aa3.42□□□□□ -1.86
TMEM39A-204ENST00000468545 SRSF4Q08170 494 aaKnown RBP3.42□□□□□ -1.86
TMEM39A-204ENST00000468545 ZNF154Q13106 437 aa3.42□□□□□ -1.86
TMEM39A-204ENST00000468545 IL18Q14116 193 aa3.42□□□□□ -1.86
TMEM39A-204ENST00000468545 EFNB3Q15768 340 aa3.42□□□□□ -1.86
TMEM39A-204ENST00000468545 TAF9Q16594 264 aa3.42□□□□□ -1.86
TMEM39A-204ENST00000468545 PYDC2Q56P42 97 aa3.42□□□□□ -1.86
TMEM39A-204ENST00000468545 UBE2NLQ5JXB2 153 aa3.42□□□□□ -1.86
TMEM39A-204ENST00000468545 FAM201AQ5SY85 155 aa3.42□□□□□ -1.86
TMEM39A-204ENST00000468545 ATAD3CQ5T2N8 411 aa3.42□□□□□ -1.86
TMEM39A-204ENST00000468545 CNIH2Q6PI25 160 aa3.42□□□□□ -1.86
TMEM39A-204ENST00000468545 FAM131AQ6UXB0 335 aa3.42□□□□□ -1.86
TMEM39A-204ENST00000468545 WDR86Q86TI4 376 aa3.42□□□□□ -1.86
TMEM39A-204ENST00000468545 TGIF2LYQ8IUE0 185 aa3.42□□□□□ -1.86
TMEM39A-204ENST00000468545 LAX1Q8IWV1 398 aa3.42□□□□□ -1.86
TMEM39A-204ENST00000468545 CDH26Q8IXH8 852 aa3.42□□□□□ -1.86
TMEM39A-204ENST00000468545 C11orf53Q8IXP5 236 aa3.42□□□□□ -1.86
TMEM39A-204ENST00000468545 OSR2Q8N2R0 312 aa3.42□□□□□ -1.86
TMEM39A-204ENST00000468545 ZNF611Q8N823 705 aa3.42□□□□□ -1.86
TMEM39A-204ENST00000468545 ACBD4Q8NC06 268 aa3.42□□□□□ -1.86
TMEM39A-204ENST00000468545 TMEM104Q8NE00 496 aa3.42□□□□□ -1.86
TMEM39A-204ENST00000468545 OR4M1Q8NGD0 313 aa3.42□□□□□ -1.86
TMEM39A-204ENST00000468545 OR5T2Q8NGG2 359 aa3.42□□□□□ -1.86
TMEM39A-204ENST00000468545 OR11L1Q8NGX0 322 aa3.42□□□□□ -1.86
TMEM39A-204ENST00000468545 KCNG3Q8TAE7 436 aa3.42□□□□□ -1.86
TMEM39A-204ENST00000468545 LRRC29Q8WV35 223 aa3.42□□□□□ -1.86
TMEM39A-204ENST00000468545 AQP3Q92482 292 aa3.42□□□□□ -1.86
TMEM39A-204ENST00000468545 CCL17Q92583 94 aa3.42□□□□□ -1.86
TMEM39A-204ENST00000468545 NRGNQ92686 78 aa3.42□□□□□ -1.86
TMEM39A-204ENST00000468545 EMG1Q92979 244 aaKnown RBP3.42□□□□□ -1.86
TMEM39A-204ENST00000468545 CPNE2Q96FN4 548 aaPredicted RBP3.42□□□□□ -1.86
TMEM39A-204ENST00000468545 S100A16Q96FQ6 103 aaKnown RBP3.42□□□□□ -1.86
TMEM39A-204ENST00000468545 NICN1Q9BSH3 213 aa3.42□□□□□ -1.86
TMEM39A-204ENST00000468545 TMEM204Q9BSN7 226 aa3.42□□□□□ -1.86
TMEM39A-204ENST00000468545 ABHD14AQ9BUJ0 271 aa3.42□□□□□ -1.86
TMEM39A-204ENST00000468545 CACNG6Q9BXT2 260 aa3.42□□□□□ -1.86
TMEM39A-204ENST00000468545 NXF2Q9GZY0 626 aaKnown RBP3.42□□□□□ -1.86
TMEM39A-204ENST00000468545 RAB1BQ9H0U4 201 aa3.42□□□□□ -1.86
TMEM39A-204ENST00000468545 MIXL1Q9H2W2 232 aa3.42□□□□□ -1.86
TMEM39A-204ENST00000468545 OR51I2Q9H344 312 aa3.42□□□□□ -1.86
TMEM39A-204ENST00000468545 LIME1Q9H400 295 aa3.42□□□□□ -1.86
TMEM39A-204ENST00000468545 FN3KRPQ9HA64 309 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms