RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 COMMD6Q7Z4G1 85 aa2□□□□□ -2.09
XRN1-206ENST00000467077 RDH10Q8IZV5 341 aa2□□□□□ -2.09
XRN1-206ENST00000467077 GTPBP8Q8N3Z3 284 aaPredicted RBP2□□□□□ -2.09
XRN1-206ENST00000467077 NKAPP1Q8N9T2 125 aa2□□□□□ -2.09
XRN1-206ENST00000467077 SUMF2Q8NBJ7 301 aa2□□□□□ -2.09
XRN1-206ENST00000467077 OR7G2Q8NG99 324 aa2□□□□□ -2.09
XRN1-206ENST00000467077 OR52E4Q8NGH9 312 aa2□□□□□ -2.09
XRN1-206ENST00000467077 OR5D13Q8NGL4 314 aa2□□□□□ -2.09
XRN1-206ENST00000467077 STAG3L4Q8TBR4 150 aa2□□□□□ -2.09
XRN1-206ENST00000467077 ZNF675Q8TD23 568 aa2□□□□□ -2.09
XRN1-206ENST00000467077 GPR151Q8TDV0 419 aa2□□□□□ -2.09
XRN1-206ENST00000467077 ZNF75CPQ92670 426 aaPredicted RBP2□□□□□ -2.09
XRN1-206ENST00000467077 EXOSC8Q96B26 276 aaKnown RBP2□□□□□ -2.09
XRN1-206ENST00000467077 APH1AQ96BI3 265 aa2□□□□□ -2.09
XRN1-206ENST00000467077 LRRC58Q96CX6 371 aa2□□□□□ -2.09
XRN1-206ENST00000467077 SLC41A3Q96GZ6 507 aa2□□□□□ -2.09
XRN1-206ENST00000467077 TIMD4Q96H15 378 aa2□□□□□ -2.09
XRN1-206ENST00000467077 ZNF681Q96N22 645 aa2□□□□□ -2.09
XRN1-206ENST00000467077 SLC38A2Q96QD8 506 aa2□□□□□ -2.09
XRN1-206ENST00000467077 MBOAT4Q96T53 435 aa2□□□□□ -2.09
XRN1-206ENST00000467077 RNF2Q99496 336 aa2□□□□□ -2.09
XRN1-206ENST00000467077 HIST1H4GQ99525 98 aa2□□□□□ -2.09
XRN1-206ENST00000467077 SERPINI1Q99574 410 aa2□□□□□ -2.09
XRN1-206ENST00000467077 NAT9Q9BTE0 207 aa2□□□□□ -2.09
XRN1-206ENST00000467077 TMEM43Q9BTV4 400 aa2□□□□□ -2.09
XRN1-206ENST00000467077 FAIM2Q9BWQ8 316 aa2□□□□□ -2.09
XRN1-206ENST00000467077 REEP4Q9H6H4 257 aa2□□□□□ -2.09
XRN1-206ENST00000467077 YY1AP1Q9H869 796 aa2□□□□□ -2.09
XRN1-206ENST00000467077 BEX1Q9HBH7 125 aa2□□□□□ -2.09
XRN1-206ENST00000467077 POPDC3Q9HBV1 291 aa2□□□□□ -2.09
XRN1-206ENST00000467077 POLE4Q9NR33 117 aa2□□□□□ -2.09
XRN1-206ENST00000467077 MMP26Q9NRE1 261 aa2□□□□□ -2.09
XRN1-206ENST00000467077 EMC3Q9P0I2 261 aa2□□□□□ -2.09
XRN1-206ENST00000467077 CES1P1Q9UKY3 287 aa2□□□□□ -2.09
XRN1-206ENST00000467077 COPS3Q9UNS2 423 aa2□□□□□ -2.09
XRN1-206ENST00000467077 NOSIPQ9Y314 301 aaKnown RBP2□□□□□ -2.09
XRN1-206ENST00000467077 CADP27708 2225 aa2□□□□□ -2.09
XRN1-206ENST00000467077 PLXNB1O43157 2135 aa2□□□□□ -2.09
XRN1-206ENST00000467077 ARHGAP32A7KAX9 2087 aa2□□□□□ -2.09
XRN1-206ENST00000467077 IGKV2D-24A0A075B6R9 120 aa1.99□□□□□ -2.09
XRN1-206ENST00000467077 IGHV1-18A0A0C4DH31 117 aa1.99□□□□□ -2.09
XRN1-206ENST00000467077 LOC100653049A0A140TA62 436 aa1.99□□□□□ -2.09
XRN1-206ENST00000467077 GNG14A0A1W2PPG7 69 aa1.99□□□□□ -2.09
XRN1-206ENST00000467077 TCRBV9S1A1TA0A576 114 aa1.99□□□□□ -2.09
XRN1-206ENST00000467077 ZNF208O43345 1280 aa1.99□□□□□ -2.09
XRN1-206ENST00000467077 RAMP3O60896 148 aa1.99□□□□□ -2.09
XRN1-206ENST00000467077 NPIPB7O75200 414 aa1.99□□□□□ -2.09
XRN1-206ENST00000467077 MRPL33O75394 65 aaKnown RBP1.99□□□□□ -2.09
XRN1-206ENST00000467077 PIAS1O75925 651 aa1.99□□□□□ -2.09
XRN1-206ENST00000467077 KRT34O76011 436 aa1.99□□□□□ -2.09
XRN1-206ENST00000467077 SEMA3DO95025 777 aa1.99□□□□□ -2.09
XRN1-206ENST00000467077 OXSR1O95747 527 aaPredicted RBP1.99□□□□□ -2.09
XRN1-206ENST00000467077 IGKV1D-16P01601 117 aa1.99□□□□□ -2.09
XRN1-206ENST00000467077 GFAPP14136 432 aa1.99□□□□□ -2.09
XRN1-206ENST00000467077 TCN1P20061 433 aaPredicted RBP1.99□□□□□ -2.09
XRN1-206ENST00000467077 COL8A2P25067 703 aa1.99□□□□□ -2.09
XRN1-206ENST00000467077 ELK4P28324 431 aa1.99□□□□□ -2.09
XRN1-206ENST00000467077 MPIP34949 423 aa1.99□□□□□ -2.09
XRN1-206ENST00000467077 KIR2DS4P43632 304 aa1.99□□□□□ -2.09
XRN1-206ENST00000467077 CCT3P49368 545 aaKnown RBP1.99□□□□□ -2.09
XRN1-206ENST00000467077 NCBP2P52298 156 aaKnown RBP eCLIP1.99□□□□□ -2.09
XRN1-206ENST00000467077 KRTAP12-4P60329 112 aa1.99□□□□□ -2.09
XRN1-206ENST00000467077 ATP6V0D1P61421 351 aa1.99□□□□□ -2.09
XRN1-206ENST00000467077 LCN2P80188 198 aa1.99□□□□□ -2.09
XRN1-206ENST00000467077 ZNF763Q0D2J5 394 aa1.99□□□□□ -2.09
XRN1-206ENST00000467077 FOXF1Q12946 379 aa1.99□□□□□ -2.09
XRN1-206ENST00000467077 IFT88Q13099 833 aa1.99□□□□□ -2.09
XRN1-206ENST00000467077 OXA1LQ15070 435 aa1.99□□□□□ -2.09
XRN1-206ENST00000467077 PPP1R7Q15435 360 aa1.99□□□□□ -2.09
XRN1-206ENST00000467077 TAF9Q16594 264 aa1.99□□□□□ -2.09
XRN1-206ENST00000467077 DUSP7Q16829 419 aa1.99□□□□□ -2.09
XRN1-206ENST00000467077 HIKESHIQ53FT3 197 aa1.99□□□□□ -2.09
XRN1-206ENST00000467077 PAGE3Q5JUK9 113 aa1.99□□□□□ -2.09
XRN1-206ENST00000467077 SAMD4BQ5PRF9 694 aaKnown RBP1.99□□□□□ -2.09
XRN1-206ENST00000467077 C1orf100Q5SVJ3 147 aa1.99□□□□□ -2.09
XRN1-206ENST00000467077 PDZK1Q5T2W1 519 aa1.99□□□□□ -2.09
XRN1-206ENST00000467077 CASC10Q5T4H9 136 aa1.99□□□□□ -2.09
XRN1-206ENST00000467077 AVPI1Q5T686 147 aa1.99□□□□□ -2.09
XRN1-206ENST00000467077 SAXO2Q658L1 398 aa1.99□□□□□ -2.09
XRN1-206ENST00000467077 C16orf87Q6PH81 154 aa1.99□□□□□ -2.09
XRN1-206ENST00000467077 TMEM107Q6UX40 140 aa1.99□□□□□ -2.09
XRN1-206ENST00000467077 CASP12Q6UXS9 341 aa1.99□□□□□ -2.09
XRN1-206ENST00000467077 PGAP1Q75T13 922 aa1.99□□□□□ -2.09
XRN1-206ENST00000467077 FAM9CQ8IZT9 166 aa1.99□□□□□ -2.09
XRN1-206ENST00000467077 RIBC1Q8N443 379 aaPredicted RBP1.99□□□□□ -2.09
XRN1-206ENST00000467077 C17orf78Q8N4C9 275 aa1.99□□□□□ -2.09
XRN1-206ENST00000467077 MMGT1Q8N4V1 131 aa1.99□□□□□ -2.09
XRN1-206ENST00000467077 WDR31Q8NA23 367 aa1.99□□□□□ -2.09
XRN1-206ENST00000467077 OR52H1Q8NGJ2 320 aa1.99□□□□□ -2.09
XRN1-206ENST00000467077 OR51S1Q8NGJ8 323 aa1.99□□□□□ -2.09
XRN1-206ENST00000467077 CDC26Q8NHZ8 85 aa1.99□□□□□ -2.09
XRN1-206ENST00000467077 MARCH1Q8TCQ1 289 aa1.99□□□□□ -2.09
XRN1-206ENST00000467077 ZFP90Q8TF47 636 aa1.99□□□□□ -2.09
XRN1-206ENST00000467077 RAB8BQ92930 207 aa1.99□□□□□ -2.09
XRN1-206ENST00000467077 YIPF5Q969M3 257 aa1.99□□□□□ -2.09
XRN1-206ENST00000467077 MAGOHBQ96A72 148 aaKnown RBP1.99□□□□□ -2.09
XRN1-206ENST00000467077 TM4SF18Q96CE8 201 aa1.99□□□□□ -2.09
XRN1-206ENST00000467077 ARL5BQ96KC2 179 aa1.99□□□□□ -2.09
XRN1-206ENST00000467077 OXGR1Q96P68 337 aa1.99□□□□□ -2.09
XRN1-206ENST00000467077 DOK1Q99704 481 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms