RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 SPIN3Q5JUX0 258 aa14.01□□□□□ -0.17
VPS52-215ENST00000464425 FIP1L1Q6UN15 594 aaKnown RBP14.01□□□□□ -0.17
VPS52-215ENST00000464425 RBMS3Q6XE24 437 aaKnown RBP14.01□□□□□ -0.17
VPS52-215ENST00000464425 USP43Q70EL4 1123 aa14.01□□□□□ -0.17
VPS52-215ENST00000464425 CMTM4Q8IZR5 234 aa14.01□□□□□ -0.17
VPS52-215ENST00000464425 OR4D6Q8NGJ1 314 aa14.01□□□□□ -0.17
VPS52-215ENST00000464425 OR6M1Q8NGM8 313 aa14.01□□□□□ -0.17
VPS52-215ENST00000464425 ZNF48Q96MX3 618 aaPredicted RBP14.01□□□□□ -0.17
VPS52-215ENST00000464425 MRPS28Q9Y2Q9 187 aaKnown RBP14.01□□□□□ -0.17
VPS52-215ENST00000464425 TRBV23-1A0A0A0MS06 115 aa14□□□□□ -0.17
VPS52-215ENST00000464425 TMEM82A0PJX8 343 aa14□□□□□ -0.17
VPS52-215ENST00000464425 K7N7A8 449 aa14□□□□□ -0.17
VPS52-215ENST00000464425 SLC17A2O00624 439 aa14□□□□□ -0.17
VPS52-215ENST00000464425 CDRT1O95170 752 aa14□□□□□ -0.17
VPS52-215ENST00000464425 HTR2CP28335 458 aa14□□□□□ -0.17
VPS52-215ENST00000464425 RPL31P62899 125 aaKnown RBP14□□□□□ -0.17
VPS52-215ENST00000464425 PDCD1Q15116 288 aa14□□□□□ -0.17
VPS52-215ENST00000464425 GLIPR1L1Q6UWM5 242 aa14□□□□□ -0.17
VPS52-215ENST00000464425 Q8N7P7 452 aa14□□□□□ -0.17
VPS52-215ENST00000464425 OR51T1Q8NGJ9 327 aa14□□□□□ -0.17
VPS52-215ENST00000464425 MRPS24Q96EL2 167 aaKnown RBP14□□□□□ -0.17
VPS52-215ENST00000464425 DMRTB1Q96MA1 342 aa14□□□□□ -0.17
VPS52-215ENST00000464425 RNF167Q9H6Y7 350 aa14□□□□□ -0.17
VPS52-215ENST00000464425 SIRT7Q9NRC8 400 aa14□□□□□ -0.17
VPS52-215ENST00000464425 MDFIC2A0A1B0GVS7 189 aa13.99□□□□□ -0.17
VPS52-215ENST00000464425 ZNF737O75373 536 aa13.99□□□□□ -0.17
VPS52-215ENST00000464425 CSTBP04080 98 aaKnown RBP13.99□□□□□ -0.17
VPS52-215ENST00000464425 SDC2P34741 201 aa13.99□□□□□ -0.17
VPS52-215ENST00000464425 NHLRC3Q5JS37 347 aa13.99□□□□□ -0.17
VPS52-215ENST00000464425 GPR107Q5VW38 600 aa13.99□□□□□ -0.17
VPS52-215ENST00000464425 TMEM200BQ69YZ2 307 aa13.99□□□□□ -0.17
VPS52-215ENST00000464425 AWAT2Q6E213 333 aa13.99□□□□□ -0.17
VPS52-215ENST00000464425 SLC16A12Q6ZSM3 486 aa13.99□□□□□ -0.17
VPS52-215ENST00000464425 KIR3DL3Q8N743 410 aa13.99□□□□□ -0.17
VPS52-215ENST00000464425 SLC25A28Q96A46 364 aa13.99□□□□□ -0.17
VPS52-215ENST00000464425 C1orf147Q96MC9 270 aaPredicted RBP13.99□□□□□ -0.17
VPS52-215ENST00000464425 DUX5Q96PT3 197 aa13.99□□□□□ -0.17
VPS52-215ENST00000464425 JMJD8Q96S16 334 aa13.99□□□□□ -0.17
VPS52-215ENST00000464425 C19orf24Q9BVV8 132 aa13.99□□□□□ -0.17
VPS52-215ENST00000464425 FAM234AQ9H0X4 552 aa13.99□□□□□ -0.17
VPS52-215ENST00000464425 PLGRKTQ9HBL7 147 aa13.99□□□□□ -0.17
VPS52-215ENST00000464425 ESM1Q9NQ30 184 aa13.99□□□□□ -0.17
VPS52-215ENST00000464425 GLS2Q9UI32 602 aa13.99□□□□□ -0.17
VPS52-215ENST00000464425 IGHV1-69DA0A0B4J2H0 117 aa13.98□□□□□ -0.17
VPS52-215ENST00000464425 MEX3AA1L020 520 aaKnown RBP13.98□□□□□ -0.17
VPS52-215ENST00000464425 IFITM5A6NNB3 132 aa13.98□□□□□ -0.17
VPS52-215ENST00000464425 GABARAPO95166 117 aa13.98□□□□□ -0.17
VPS52-215ENST00000464425 HTR3BO95264 441 aa13.98□□□□□ -0.17
VPS52-215ENST00000464425 IGHV1-69P01742 117 aa13.98□□□□□ -0.17
VPS52-215ENST00000464425 GTF2F2P13984 249 aa13.98□□□□□ -0.17
VPS52-215ENST00000464425 GABRR1P24046 479 aa13.98□□□□□ -0.17
VPS52-215ENST00000464425 SCN1BQ07699 218 aa13.98□□□□□ -0.17
VPS52-215ENST00000464425 BLMHQ13867 455 aa13.98□□□□□ -0.17
VPS52-215ENST00000464425 EDDM3AQ14507 147 aa13.98□□□□□ -0.17
VPS52-215ENST00000464425 CTF1Q16619 201 aa13.98□□□□□ -0.17
VPS52-215ENST00000464425 SLC22A6Q4U2R8 563 aa13.98□□□□□ -0.17
VPS52-215ENST00000464425 C9orf139Q6ZV77 190 aa13.98□□□□□ -0.17
VPS52-215ENST00000464425 NR2C2APQ86WQ0 139 aa13.98□□□□□ -0.17
VPS52-215ENST00000464425 OSR2Q8N2R0 312 aa13.98□□□□□ -0.17
VPS52-215ENST00000464425 ZDHHC22Q8N966 263 aa13.98□□□□□ -0.17
VPS52-215ENST00000464425 SNX22Q96L94 193 aa13.98□□□□□ -0.17
VPS52-215ENST00000464425 CHST6Q9GZX3 395 aa13.98□□□□□ -0.17
VPS52-215ENST00000464425 STEAP1Q9UHE8 339 aa13.98□□□□□ -0.17
VPS52-215ENST00000464425 A0A0G2JK05 382 aa13.97□□□□□ -0.17
VPS52-215ENST00000464425 A0A1W2PRD5 423 aa13.97□□□□□ -0.17
VPS52-215ENST00000464425 A0A1W2PRF3 423 aa13.97□□□□□ -0.17
VPS52-215ENST00000464425 A0A1W2PRM7 423 aa13.97□□□□□ -0.17
VPS52-215ENST00000464425 NOTOA8MTQ0 251 aa13.97□□□□□ -0.17
VPS52-215ENST00000464425 M0R1W7 72 aa13.97□□□□□ -0.17
VPS52-215ENST00000464425 AIPO00170 330 aa13.97□□□□□ -0.17
VPS52-215ENST00000464425 SIRPB1O00241 398 aa13.97□□□□□ -0.17
VPS52-215ENST00000464425 SH2D1BO14796 132 aa13.97□□□□□ -0.17
VPS52-215ENST00000464425 PSPNO60542 156 aa13.97□□□□□ -0.17
VPS52-215ENST00000464425 TMEM127O75204 238 aa13.97□□□□□ -0.17
VPS52-215ENST00000464425 BPNT1O95861 308 aa13.97□□□□□ -0.17
VPS52-215ENST00000464425 TMBIM6P55061 237 aa13.97□□□□□ -0.17
VPS52-215ENST00000464425 EDDM3BP56851 147 aa13.97□□□□□ -0.17
VPS52-215ENST00000464425 OR10A3P58181 314 aa13.97□□□□□ -0.17
VPS52-215ENST00000464425 BPIFB3P59826 476 aa13.97□□□□□ -0.17
VPS52-215ENST00000464425 LSM3P62310 102 aaKnown RBP13.97□□□□□ -0.17
VPS52-215ENST00000464425 BAMBIQ13145 260 aa13.97□□□□□ -0.17
VPS52-215ENST00000464425 KLRD1Q13241 179 aa13.97□□□□□ -0.17
VPS52-215ENST00000464425 RAB11BQ15907 218 aa13.97□□□□□ -0.17
VPS52-215ENST00000464425 TUSC1Q2TAM9 212 aa13.97□□□□□ -0.17
VPS52-215ENST00000464425 DEFB112Q30KQ8 113 aa13.97□□□□□ -0.17
VPS52-215ENST00000464425 C17orf107Q6ZR85 190 aa13.97□□□□□ -0.17
VPS52-215ENST00000464425 C1orf122Q6ZSJ8 110 aa13.97□□□□□ -0.17
VPS52-215ENST00000464425 GDPD3Q7L5L3 318 aa13.97□□□□□ -0.17
VPS52-215ENST00000464425 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.97□□□□□ -0.17
VPS52-215ENST00000464425 OR5D13Q8NGL4 314 aa13.97□□□□□ -0.17
VPS52-215ENST00000464425 OR10K1Q8NGX5 313 aa13.97□□□□□ -0.17
VPS52-215ENST00000464425 BCL7BQ9BQE9 202 aa13.97□□□□□ -0.17
VPS52-215ENST00000464425 CST11Q9H112 138 aa13.97□□□□□ -0.17
VPS52-215ENST00000464425 RNASEK-C17orf49H0YIS7 233 aa13.96□□□□□ -0.17
VPS52-215ENST00000464425 TRIM77I1YAP6 450 aa13.96□□□□□ -0.17
VPS52-215ENST00000464425 OR2H2O95918 312 aa13.96□□□□□ -0.17
VPS52-215ENST00000464425 IL1AP01583 271 aa13.96□□□□□ -0.17
VPS52-215ENST00000464425 ARSBP15848 533 aa13.96□□□□□ -0.17
VPS52-215ENST00000464425 CCL3L1P16619 93 aa13.96□□□□□ -0.17
VPS52-215ENST00000464425 SERPINA2P20848 420 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms