RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 HGFACQ04756 655 aa7.63□□□□□ -1.19
HDAC3-202ENST00000459727 SIGLEC14Q08ET2 396 aa7.63□□□□□ -1.19
HDAC3-202ENST00000459727 Q0VFX4 171 aa7.63□□□□□ -1.19
HDAC3-202ENST00000459727 PRDX4Q13162 271 aa7.63□□□□□ -1.19
HDAC3-202ENST00000459727 MRPL49Q13405 166 aaKnown RBP7.63□□□□□ -1.19
HDAC3-202ENST00000459727 RHEBQ15382 184 aa7.63□□□□□ -1.19
HDAC3-202ENST00000459727 PIGYQ3MUY2 71 aa7.63□□□□□ -1.19
HDAC3-202ENST00000459727 PHLDA2Q53GA4 152 aa7.63□□□□□ -1.19
HDAC3-202ENST00000459727 AVPI1Q5T686 147 aa7.63□□□□□ -1.19
HDAC3-202ENST00000459727 TSPO2Q5TGU0 170 aa7.63□□□□□ -1.19
HDAC3-202ENST00000459727 NUFIP2Q7Z417 695 aaKnown RBP7.63□□□□□ -1.19
HDAC3-202ENST00000459727 FOXRED2Q8IWF2 684 aa7.63□□□□□ -1.19
HDAC3-202ENST00000459727 OR56B2PQ8NGI1 322 aa7.63□□□□□ -1.19
HDAC3-202ENST00000459727 GLYATL2Q8WU03 294 aa7.63□□□□□ -1.19
HDAC3-202ENST00000459727 ZNF837Q96EG3 531 aaPredicted RBP7.63□□□□□ -1.19
HDAC3-202ENST00000459727 THOC3Q96J01 351 aaKnown RBP7.63□□□□□ -1.19
HDAC3-202ENST00000459727 FER1L6-AS2Q96M78 137 aa7.63□□□□□ -1.19
HDAC3-202ENST00000459727 TLNRD1Q9H1K6 362 aa7.63□□□□□ -1.19
HDAC3-202ENST00000459727 HIPK2Q9H2X6 1198 aa7.63□□□□□ -1.19
HDAC3-202ENST00000459727 PLEKHF2Q9H8W4 249 aa7.63□□□□□ -1.19
HDAC3-202ENST00000459727 Q9N2K0 584 aa7.63□□□□□ -1.19
HDAC3-202ENST00000459727 FSCN3Q9NQT6 498 aa7.63□□□□□ -1.19
HDAC3-202ENST00000459727 TREM2Q9NZC2 230 aa7.63□□□□□ -1.19
HDAC3-202ENST00000459727 ATP23Q9Y6H3 246 aa7.63□□□□□ -1.19
HDAC3-202ENST00000459727 A0A0G2JMM0 328 aa7.62□□□□□ -1.19
HDAC3-202ENST00000459727 A0A1W2PPB8 328 aa7.62□□□□□ -1.19
HDAC3-202ENST00000459727 A0A1W2PRS3 328 aa7.62□□□□□ -1.19
HDAC3-202ENST00000459727 KIR3DP1A8MWS1 328 aa7.62□□□□□ -1.19
HDAC3-202ENST00000459727 NPIPB11E5RHQ5 1161 aa7.62□□□□□ -1.19
HDAC3-202ENST00000459727 KLRC4-KLRK1H3BQV0 150 aa7.62□□□□□ -1.19
HDAC3-202ENST00000459727 NUPL2O15504 423 aaKnown RBP7.62□□□□□ -1.19
HDAC3-202ENST00000459727 DFFBO76075 338 aa7.62□□□□□ -1.19
HDAC3-202ENST00000459727 SCAF4O95104 1147 aaKnown RBP7.62□□□□□ -1.19
HDAC3-202ENST00000459727 PRH1P02810 166 aa7.62□□□□□ -1.19
HDAC3-202ENST00000459727 RFPL3SP0C7P2 107 aa7.62□□□□□ -1.19
HDAC3-202ENST00000459727 UCP1P25874 307 aa7.62□□□□□ -1.19
HDAC3-202ENST00000459727 APLNRP35414 380 aa7.62□□□□□ -1.19
HDAC3-202ENST00000459727 SNCAP37840 140 aa7.62□□□□□ -1.19
HDAC3-202ENST00000459727 CD200P41217 278 aa7.62□□□□□ -1.19
HDAC3-202ENST00000459727 NKX2-1P43699 371 aaPredicted RBP7.62□□□□□ -1.19
HDAC3-202ENST00000459727 LHX2P50458 406 aa7.62□□□□□ -1.19
HDAC3-202ENST00000459727 RAB13P51153 203 aa7.62□□□□□ -1.19
HDAC3-202ENST00000459727 RAB5BP61020 215 aa7.62□□□□□ -1.19
HDAC3-202ENST00000459727 GNG3P63215 75 aa7.62□□□□□ -1.19
HDAC3-202ENST00000459727 ARF1P84077 181 aaKnown RBP7.62□□□□□ -1.19
HDAC3-202ENST00000459727 IL24Q13007 206 aa7.62□□□□□ -1.19
HDAC3-202ENST00000459727 RNF212Q495C1 297 aa7.62□□□□□ -1.19
HDAC3-202ENST00000459727 SHEQ5VZ18 495 aa7.62□□□□□ -1.19
HDAC3-202ENST00000459727 OR2A2Q6IF42 318 aa7.62□□□□□ -1.19
HDAC3-202ENST00000459727 ABCA7Q8IZY2 2146 aa7.62□□□□□ -1.19
HDAC3-202ENST00000459727 OR2C3Q8N628 320 aa7.62□□□□□ -1.19
HDAC3-202ENST00000459727 SLC35G3Q8N808 338 aa7.62□□□□□ -1.19
HDAC3-202ENST00000459727 OR5D13Q8NGL4 314 aa7.62□□□□□ -1.19
HDAC3-202ENST00000459727 ABHD3Q8WU67 409 aa7.62□□□□□ -1.19
HDAC3-202ENST00000459727 BOD1Q96IK1 185 aa7.62□□□□□ -1.19
HDAC3-202ENST00000459727 LRFN3Q9BTN0 628 aa7.62□□□□□ -1.19
HDAC3-202ENST00000459727 C19orf12Q9NSK7 152 aa7.62□□□□□ -1.19
HDAC3-202ENST00000459727 PRR13Q9NZ81 148 aa7.62□□□□□ -1.19
HDAC3-202ENST00000459727 LHX6Q9UPM6 363 aa7.62□□□□□ -1.19
HDAC3-202ENST00000459727 POLDIP2Q9Y2S7 368 aa7.62□□□□□ -1.19
HDAC3-202ENST00000459727 ZNF318Q5VUA4 2279 aa7.61□□□□□ -1.19
HDAC3-202ENST00000459727 RNF212BA8MTL3 300 aa7.61□□□□□ -1.19
HDAC3-202ENST00000459727 WRBO00258 174 aa7.61□□□□□ -1.19
HDAC3-202ENST00000459727 TUSC2O75896 110 aa7.61□□□□□ -1.19
HDAC3-202ENST00000459727 SELEP16581 610 aa7.61□□□□□ -1.19
HDAC3-202ENST00000459727 TUBG1P23258 451 aa7.61□□□□□ -1.19
HDAC3-202ENST00000459727 CD80P33681 288 aa7.61□□□□□ -1.19
HDAC3-202ENST00000459727 HAAOP46952 286 aa7.61□□□□□ -1.19
HDAC3-202ENST00000459727 RRADP55042 308 aa7.61□□□□□ -1.19
HDAC3-202ENST00000459727 CLDN18P56856 261 aa7.61□□□□□ -1.19
HDAC3-202ENST00000459727 EWSR1Q01844 656 aaKnown RBP eCLIP7.61□□□□□ -1.19
HDAC3-202ENST00000459727 PLGLB1Q02325 96 aa7.61□□□□□ -1.19
HDAC3-202ENST00000459727 ZNF616Q08AN1 781 aa7.61□□□□□ -1.19
HDAC3-202ENST00000459727 SPEM2Q0P670 501 aa7.61□□□□□ -1.19
HDAC3-202ENST00000459727 CLN3Q13286 438 aa7.61□□□□□ -1.19
HDAC3-202ENST00000459727 MIDNQ504T8 468 aa7.61□□□□□ -1.19
HDAC3-202ENST00000459727 FIP1L1Q6UN15 594 aaKnown RBP7.61□□□□□ -1.19
HDAC3-202ENST00000459727 LYZL2Q7Z4W2 148 aa7.61□□□□□ -1.19
HDAC3-202ENST00000459727 FAM219AQ8IW50 185 aa7.61□□□□□ -1.19
HDAC3-202ENST00000459727 NEK7Q8TDX7 302 aa7.61□□□□□ -1.19
HDAC3-202ENST00000459727 PSMF1Q92530 271 aa7.61□□□□□ -1.19
HDAC3-202ENST00000459727 RBMXL1Q96E39 390 aaKnown RBP7.61□□□□□ -1.19
HDAC3-202ENST00000459727 AKR1E2Q96JD6 320 aa7.61□□□□□ -1.19
HDAC3-202ENST00000459727 TCEAL7Q9BRU2 100 aa7.61□□□□□ -1.19
HDAC3-202ENST00000459727 CABLES2Q9BTV7 478 aa7.61□□□□□ -1.19
HDAC3-202ENST00000459727 SPRY4Q9C004 299 aa7.61□□□□□ -1.19
HDAC3-202ENST00000459727 TUBG2Q9NRH3 451 aa7.61□□□□□ -1.19
HDAC3-202ENST00000459727 GLRX2Q9NS18 164 aa7.61□□□□□ -1.19
HDAC3-202ENST00000459727 SLC7A10Q9NS82 523 aa7.61□□□□□ -1.19
HDAC3-202ENST00000459727 DEPPQ9NTK1 212 aa7.61□□□□□ -1.19
HDAC3-202ENST00000459727 LYRM2Q9NU23 88 aaPredicted RBP7.61□□□□□ -1.19
HDAC3-202ENST00000459727 CACFD1Q9UGQ2 172 aa7.61□□□□□ -1.19
HDAC3-202ENST00000459727 RNF150Q9ULK6 438 aa7.61□□□□□ -1.19
HDAC3-202ENST00000459727 RCL1Q9Y2P8 373 aaKnown RBP7.61□□□□□ -1.19
HDAC3-202ENST00000459727 CACNA1CQ13936 2221 aa7.61□□□□□ -1.19
HDAC3-202ENST00000459727 SEC16AO15027 2179 aa7.61□□□□□ -1.19
HDAC3-202ENST00000459727 EPG5Q9HCE0 2579 aa7.61□□□□□ -1.19
HDAC3-202ENST00000459727 CACNA1EQ15878 2313 aa7.6□□□□□ -1.19
HDAC3-202ENST00000459727 BRWD1Q9NSI6 2320 aa7.6□□□□□ -1.19
HDAC3-202ENST00000459727 A0A1B0GU03 582 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms