RNA–Protein interactions for RNA: ENST00000454952.1

NIF3L1-209, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-209ENST00000454952 RPL23AP62750 156 aaKnown RBP6.38□□□□□ -1.39
NIF3L1-209ENST00000454952 DGCR2P98153 550 aa6.38□□□□□ -1.39
NIF3L1-209ENST00000454952 TMED1Q13445 227 aa6.38□□□□□ -1.39
NIF3L1-209ENST00000454952 FLOT2Q14254 428 aa6.38□□□□□ -1.39
NIF3L1-209ENST00000454952 HLA-DRB5Q30154 266 aa6.38□□□□□ -1.39
NIF3L1-209ENST00000454952 C9orf152Q5JTZ5 239 aa6.38□□□□□ -1.39
NIF3L1-209ENST00000454952 PRAMEF5Q5TYX0 476 aa6.38□□□□□ -1.39
NIF3L1-209ENST00000454952 AADACL4Q5VUY2 407 aa6.38□□□□□ -1.39
NIF3L1-209ENST00000454952 PLEKHG7Q6ZR37 379 aa6.38□□□□□ -1.39
NIF3L1-209ENST00000454952 UTS2BQ765I0 119 aa6.38□□□□□ -1.39
NIF3L1-209ENST00000454952 SPATA24Q86W54 205 aa6.38□□□□□ -1.39
NIF3L1-209ENST00000454952 MRPL41Q8IXM3 137 aaKnown RBP6.38□□□□□ -1.39
NIF3L1-209ENST00000454952 HS3ST5Q8IZT8 346 aa6.38□□□□□ -1.39
NIF3L1-209ENST00000454952 TPRX1Q8N7U7 411 aa6.38□□□□□ -1.39
NIF3L1-209ENST00000454952 TCEANCQ8N8B7 351 aa6.38□□□□□ -1.39
NIF3L1-209ENST00000454952 OR52N4Q8NGI2 321 aa6.38□□□□□ -1.39
NIF3L1-209ENST00000454952 RPEQ96AT9 228 aa6.38□□□□□ -1.39
NIF3L1-209ENST00000454952 MYCBPQ99417 103 aaPredicted RBP6.38□□□□□ -1.39
NIF3L1-209ENST00000454952 THTPAQ9BU02 230 aa6.38□□□□□ -1.39
NIF3L1-209ENST00000454952 GON7Q9BXV9 100 aa6.38□□□□□ -1.39
NIF3L1-209ENST00000454952 HMG20AQ9NP66 347 aa6.38□□□□□ -1.39
NIF3L1-209ENST00000454952 RBFOX1Q9NWB1 397 aaKnown RBP6.38□□□□□ -1.39
NIF3L1-209ENST00000454952 HHLA2Q9UM44 414 aa6.38□□□□□ -1.39
NIF3L1-209ENST00000454952 LOC107986453A0A1B0GWG9 222 aa6.37□□□□□ -1.39
NIF3L1-209ENST00000454952 ZNF729A6NN14 1252 aaPredicted RBP6.37□□□□□ -1.39
NIF3L1-209ENST00000454952 SIRPB1O00241 398 aa6.37□□□□□ -1.39
NIF3L1-209ENST00000454952 MAGEB4O15481 346 aaPredicted RBP6.37□□□□□ -1.39
NIF3L1-209ENST00000454952 FGF16O43320 207 aa6.37□□□□□ -1.39
NIF3L1-209ENST00000454952 INMTO95050 263 aa6.37□□□□□ -1.39
NIF3L1-209ENST00000454952 ZFPL1O95159 310 aa6.37□□□□□ -1.39
NIF3L1-209ENST00000454952 OR2H2O95918 312 aa6.37□□□□□ -1.39
NIF3L1-209ENST00000454952 ZNF44P15621 663 aa6.37□□□□□ -1.39
NIF3L1-209ENST00000454952 JUNBP17275 347 aaPredicted RBP6.37□□□□□ -1.39
NIF3L1-209ENST00000454952 ATF1P18846 271 aa6.37□□□□□ -1.39
NIF3L1-209ENST00000454952 BCL3P20749 454 aa6.37□□□□□ -1.39
NIF3L1-209ENST00000454952 CD24P25063 80 aa6.37□□□□□ -1.39
NIF3L1-209ENST00000454952 DUSP1P28562 367 aa6.37□□□□□ -1.39
NIF3L1-209ENST00000454952 HTR1FP30939 366 aa6.37□□□□□ -1.39
NIF3L1-209ENST00000454952 HOXD3P31249 432 aaPredicted RBP6.37□□□□□ -1.39
NIF3L1-209ENST00000454952 OR3A4PP47883 348 aa6.37□□□□□ -1.39
NIF3L1-209ENST00000454952 EFNB1P98172 346 aa6.37□□□□□ -1.39
NIF3L1-209ENST00000454952 BNIP1Q12981 228 aa6.37□□□□□ -1.39
NIF3L1-209ENST00000454952 PDZK1IP1Q13113 114 aa6.37□□□□□ -1.39
NIF3L1-209ENST00000454952 ODF4Q2M2E3 257 aa6.37□□□□□ -1.39
NIF3L1-209ENST00000454952 DNAL1Q4LDG9 190 aa6.37□□□□□ -1.39
NIF3L1-209ENST00000454952 KRBOX4Q5JUW0 171 aa6.37□□□□□ -1.39
NIF3L1-209ENST00000454952 TMEM244Q5VVB8 128 aa6.37□□□□□ -1.39
NIF3L1-209ENST00000454952 C12orf73Q69YU5 71 aa6.37□□□□□ -1.39
NIF3L1-209ENST00000454952 OR2W3Q7Z3T1 314 aa6.37□□□□□ -1.39
NIF3L1-209ENST00000454952 RNF144BQ7Z419 303 aa6.37□□□□□ -1.39
NIF3L1-209ENST00000454952 FOXRED2Q8IWF2 684 aa6.37□□□□□ -1.39
NIF3L1-209ENST00000454952 SAXO1Q8IYX7 474 aa6.37□□□□□ -1.39
NIF3L1-209ENST00000454952 ZNF565Q8N9K5 539 aa6.37□□□□□ -1.39
NIF3L1-209ENST00000454952 OR10H4Q8NGA5 316 aa6.37□□□□□ -1.39
NIF3L1-209ENST00000454952 OR9G1Q8NH87 305 aa6.37□□□□□ -1.39
NIF3L1-209ENST00000454952 BCAS4Q8TDM0 211 aa6.37□□□□□ -1.39
NIF3L1-209ENST00000454952 RFKQ969G6 155 aa6.37□□□□□ -1.39
NIF3L1-209ENST00000454952 TOMM40LQ969M1 308 aa6.37□□□□□ -1.39
NIF3L1-209ENST00000454952 CPNE2Q96FN4 548 aaPredicted RBP6.37□□□□□ -1.39
NIF3L1-209ENST00000454952 HRASLS5Q96KN8 279 aa6.37□□□□□ -1.39
NIF3L1-209ENST00000454952 OPALINQ96PE5 141 aa6.37□□□□□ -1.39
NIF3L1-209ENST00000454952 COMMD4Q9H0A8 199 aa6.37□□□□□ -1.39
NIF3L1-209ENST00000454952 GSTK1Q9Y2Q3 226 aa6.37□□□□□ -1.39
NIF3L1-209ENST00000454952 U3KQK5 164 aa6.37□□□□□ -1.39
NIF3L1-209ENST00000454952 TENM3Q9P273 2699 aa6.37□□□□□ -1.39
NIF3L1-209ENST00000454952 KBTBD11-OT1A0A1B0GTJ5 212 aa6.36□□□□□ -1.39
NIF3L1-209ENST00000454952 A0A1W2PQL4 384 aaPredicted RBP6.36□□□□□ -1.39
NIF3L1-209ENST00000454952 TCRBV3S1A0A5B6 114 aa6.36□□□□□ -1.39
NIF3L1-209ENST00000454952 ZAR1LA6NP61 321 aa6.36□□□□□ -1.39
NIF3L1-209ENST00000454952 SERPINE3A8MV23 424 aa6.36□□□□□ -1.39
NIF3L1-209ENST00000454952 LY6LH3BQJ8 138 aa6.36□□□□□ -1.39
NIF3L1-209ENST00000454952 DEGS1O15121 323 aa6.36□□□□□ -1.39
NIF3L1-209ENST00000454952 MMP23AO75900 390 aa6.36□□□□□ -1.39
NIF3L1-209ENST00000454952 KDM4BO94953 1096 aa6.36□□□□□ -1.39
NIF3L1-209ENST00000454952 MT-ND2P03891 347 aa6.36□□□□□ -1.39
NIF3L1-209ENST00000454952 AMY1AP04745 511 aa6.36□□□□□ -1.39
NIF3L1-209ENST00000454952 AMY2AP04746 511 aa6.36□□□□□ -1.39
NIF3L1-209ENST00000454952 ISG15P05161 165 aa6.36□□□□□ -1.39
NIF3L1-209ENST00000454952 DBTP11182 482 aaKnown RBP6.36□□□□□ -1.39
NIF3L1-209ENST00000454952 TMEM11P17152 192 aa6.36□□□□□ -1.39
NIF3L1-209ENST00000454952 C21orf33P30042 268 aaPredicted RBP6.36□□□□□ -1.39
NIF3L1-209ENST00000454952 NPBWR2P48146 333 aa6.36□□□□□ -1.39
NIF3L1-209ENST00000454952 RAB7AP51149 207 aa6.36□□□□□ -1.39
NIF3L1-209ENST00000454952 AESQ08117 197 aa6.36□□□□□ -1.39
NIF3L1-209ENST00000454952 MADCAM1Q13477 382 aa6.36□□□□□ -1.39
NIF3L1-209ENST00000454952 RBM39Q14498 530 aaKnown RBP6.36□□□□□ -1.39
NIF3L1-209ENST00000454952 ETV3LQ6ZN32 361 aa6.36□□□□□ -1.39
NIF3L1-209ENST00000454952 SLC16A12Q6ZSM3 486 aa6.36□□□□□ -1.39
NIF3L1-209ENST00000454952 KCTD20Q7Z5Y7 419 aa6.36□□□□□ -1.39
NIF3L1-209ENST00000454952 ZNF695Q8IW36 515 aa6.36□□□□□ -1.39
NIF3L1-209ENST00000454952 OR8H3Q8N146 312 aa6.36□□□□□ -1.39
NIF3L1-209ENST00000454952 CCDC197Q8NCU1 140 aa6.36□□□□□ -1.39
NIF3L1-209ENST00000454952 KLHL30-AS1Q8NEE0 82 aa6.36□□□□□ -1.39
NIF3L1-209ENST00000454952 HAVCR2Q8TDQ0 301 aa6.36□□□□□ -1.39
NIF3L1-209ENST00000454952 MRPL48Q96GC5 212 aaKnown RBP6.36□□□□□ -1.39
NIF3L1-209ENST00000454952 IL4I1Q96RQ9 567 aa6.36□□□□□ -1.39
NIF3L1-209ENST00000454952 TBX5Q99593 518 aa6.36□□□□□ -1.39
NIF3L1-209ENST00000454952 NCOR1P1Q9H4R4 102 aa6.36□□□□□ -1.39
NIF3L1-209ENST00000454952 ZNF286AQ9HBT8 521 aa6.36□□□□□ -1.39
NIF3L1-209ENST00000454952 IL36RNQ9UBH0 155 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms