RNA–Protein interactions for RNA: ENST00000448472.5

CHRD-205, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 3,547 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-205ENST00000448472 A0A0U1RQV5 110 aa13.72□□□□□ -0.21
CHRD-205ENST00000448472 ZNF705GA8MUZ8 300 aaPredicted RBP13.72□□□□□ -0.21
CHRD-205ENST00000448472 SCAF4O95104 1147 aaKnown RBP13.72□□□□□ -0.21
CHRD-205ENST00000448472 GLB1P16278 677 aa13.72□□□□□ -0.21
CHRD-205ENST00000448472 SPSB1Q96BD6 273 aa13.72□□□□□ -0.21
CHRD-205ENST00000448472 MSI2Q96DH6 328 aaKnown RBP13.72□□□□□ -0.21
CHRD-205ENST00000448472 SNX22Q96L94 193 aa13.72□□□□□ -0.21
CHRD-205ENST00000448472 UCK1Q9HA47 277 aa13.72□□□□□ -0.21
CHRD-205ENST00000448472 K7N7A8 449 aa13.72□□□□□ -0.21
CHRD-205ENST00000448472 TERTO14746 1132 aaKnown RBP13.72□□□□□ -0.21
CHRD-205ENST00000448472 PHOX2AO14813 284 aa13.72□□□□□ -0.21
CHRD-205ENST00000448472 CNOT4O95628 575 aaKnown RBP13.72□□□□□ -0.21
CHRD-205ENST00000448472 F10P00742 488 aa13.72□□□□□ -0.21
CHRD-205ENST00000448472 ZNF32P17041 273 aa13.72□□□□□ -0.21
CHRD-205ENST00000448472 ERVFRD-1P60508 538 aa13.72□□□□□ -0.21
CHRD-205ENST00000448472 RHBDD2Q6NTF9 364 aa13.72□□□□□ -0.21
CHRD-205ENST00000448472 DMRT1Q9Y5R6 373 aa13.72□□□□□ -0.21
CHRD-205ENST00000448472 IGKV1-27A0A075B6S5 117 aa13.71□□□□□ -0.21
CHRD-205ENST00000448472 SHISA7A6NL88 538 aa13.71□□□□□ -0.21
CHRD-205ENST00000448472 ZNF880Q6PDB4 577 aa13.71□□□□□ -0.21
CHRD-205ENST00000448472 SLC16A14Q7RTX9 510 aa13.71□□□□□ -0.21
CHRD-205ENST00000448472 YRDCQ86U90 279 aaKnown RBP13.71□□□□□ -0.21
CHRD-205ENST00000448472 GAPTQ8N292 157 aa13.71□□□□□ -0.21
CHRD-205ENST00000448472 UBALD1Q8TB05 177 aa13.71□□□□□ -0.21
CHRD-205ENST00000448472 MUCL1Q96DR8 90 aa13.71□□□□□ -0.21
CHRD-205ENST00000448472 HMGB3O15347 200 aaKnown RBP13.71□□□□□ -0.21
CHRD-205ENST00000448472 SLC34A2O95436 690 aa13.71□□□□□ -0.21
CHRD-205ENST00000448472 RNF224P0DH78 156 aa13.71□□□□□ -0.21
CHRD-205ENST00000448472 IAPPP10997 89 aa13.71□□□□□ -0.21
CHRD-205ENST00000448472 GAMTQ14353 236 aa13.71□□□□□ -0.21
CHRD-205ENST00000448472 NFAM1Q8NET5 270 aaPredicted RBP13.71□□□□□ -0.21
CHRD-205ENST00000448472 LYPD6BQ8NI32 183 aa13.71□□□□□ -0.21
CHRD-205ENST00000448472 NTNG2Q96CW9 530 aa13.71□□□□□ -0.21
CHRD-205ENST00000448472 GALNT14Q96FL9 552 aa13.71□□□□□ -0.21
CHRD-205ENST00000448472 FAM210BQ96KR6 192 aa13.71□□□□□ -0.21
CHRD-205ENST00000448472 OR51B6Q9H340 312 aa13.71□□□□□ -0.21
CHRD-205ENST00000448472 C19orf25Q9UFG5 118 aaPredicted RBP13.71□□□□□ -0.21
CHRD-205ENST00000448472 CEBPZOSA8MTT3 80 aa13.7□□□□□ -0.22
CHRD-205ENST00000448472 RRP8O43159 456 aaKnown RBP13.7□□□□□ -0.22
CHRD-205ENST00000448472 PDCD6O75340 191 aa13.7□□□□□ -0.22
CHRD-205ENST00000448472 SERPINE2P07093 398 aa13.7□□□□□ -0.22
CHRD-205ENST00000448472 NPBWR2P48146 333 aa13.7□□□□□ -0.22
CHRD-205ENST00000448472 ELLP55199 621 aaPredicted RBP13.7□□□□□ -0.22
CHRD-205ENST00000448472 TMEM171Q8WVE6 324 aa13.7□□□□□ -0.22
CHRD-205ENST00000448472 PISDQ9UG56 409 aa13.7□□□□□ -0.22
CHRD-205ENST00000448472 V9GYS6 101 aa13.7□□□□□ -0.22
CHRD-205ENST00000448472 FER1L5A0AVI2 2057 aa13.7□□□□□ -0.22
CHRD-205ENST00000448472 ZNF729A6NN14 1252 aaPredicted RBP13.7□□□□□ -0.22
CHRD-205ENST00000448472 MMP9P14780 707 aa13.7□□□□□ -0.22
CHRD-205ENST00000448472 CD200P41217 278 aa13.7□□□□□ -0.22
CHRD-205ENST00000448472 EXTL1Q92935 676 aa13.7□□□□□ -0.22
CHRD-205ENST00000448472 UFSP2Q9NUQ7 469 aa13.7□□□□□ -0.22
CHRD-205ENST00000448472 GAB2Q9UQC2 676 aa13.7□□□□□ -0.22
CHRD-205ENST00000448472 IGKV1-12A0A0C4DH73 117 aa13.7□□□□□ -0.22
CHRD-205ENST00000448472 A0A1B0GV90 55 aa13.7□□□□□ -0.22
CHRD-205ENST00000448472 A0A1W2PR77 199 aa13.7□□□□□ -0.22
CHRD-205ENST00000448472 A0A1W2PR80 420 aa13.7□□□□□ -0.22
CHRD-205ENST00000448472 SMCO3A2RU48 225 aa13.7□□□□□ -0.22
CHRD-205ENST00000448472 TSTD3H0UI37 97 aa13.7□□□□□ -0.22
CHRD-205ENST00000448472 GDF9O60383 454 aa13.7□□□□□ -0.22
CHRD-205ENST00000448472 IGKV1D-12P01611 117 aa13.7□□□□□ -0.22
CHRD-205ENST00000448472 DTYMKP23919 212 aa13.7□□□□□ -0.22
CHRD-205ENST00000448472 SUCLG1P53597 346 aaKnown RBP13.7□□□□□ -0.22
CHRD-205ENST00000448472 ZNF611Q8N823 705 aa13.7□□□□□ -0.22
CHRD-205ENST00000448472 HS3ST3B1Q9Y662 390 aa13.7□□□□□ -0.22
CHRD-205ENST00000448472 GATCO43716 136 aaKnown RBP13.69□□□□□ -0.22
CHRD-205ENST00000448472 HIST1H2BKO60814 126 aa13.69□□□□□ -0.22
CHRD-205ENST00000448472 HIST1H2BJP06899 126 aa13.69□□□□□ -0.22
CHRD-205ENST00000448472 SRP19P09132 144 aaKnown RBP13.69□□□□□ -0.22
CHRD-205ENST00000448472 FUT3P21217 361 aa13.69□□□□□ -0.22
CHRD-205ENST00000448472 HIST1H2BOP23527 126 aa13.69□□□□□ -0.22
CHRD-205ENST00000448472 HIST1H2BBP33778 126 aa13.69□□□□□ -0.22
CHRD-205ENST00000448472 HIST1H2BDP58876 126 aa13.69□□□□□ -0.22
CHRD-205ENST00000448472 STARD6P59095 220 aa13.69□□□□□ -0.22
CHRD-205ENST00000448472 HIST1H2BCP62807 126 aa13.69□□□□□ -0.22
CHRD-205ENST00000448472 ELOBQ15370 118 aa13.69□□□□□ -0.22
CHRD-205ENST00000448472 ADIRFQ15847 76 aa13.69□□□□□ -0.22
CHRD-205ENST00000448472 HIST2H2BEQ16778 126 aa13.69□□□□□ -0.22
CHRD-205ENST00000448472 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.69□□□□□ -0.22
CHRD-205ENST00000448472 WDR5BQ86VZ2 330 aa13.69□□□□□ -0.22
CHRD-205ENST00000448472 OR1F12Q8NHA8 337 aa13.69□□□□□ -0.22
CHRD-205ENST00000448472 HIST1H2BHQ93079 126 aa13.69□□□□□ -0.22
CHRD-205ENST00000448472 INTS12Q96CB8 462 aaKnown RBP13.69□□□□□ -0.22
CHRD-205ENST00000448472 C18orf12Q96KH6 178 aa13.69□□□□□ -0.22
CHRD-205ENST00000448472 SGCZQ96LD1 299 aa13.69□□□□□ -0.22
CHRD-205ENST00000448472 HIST1H2BNQ99877 126 aa13.69□□□□□ -0.22
CHRD-205ENST00000448472 HIST1H2BMQ99879 126 aa13.69□□□□□ -0.22
CHRD-205ENST00000448472 CABLES2Q9BTV7 478 aa13.69□□□□□ -0.22
CHRD-205ENST00000448472 RSG1Q9BU20 258 aa13.69□□□□□ -0.22
CHRD-205ENST00000448472 CCL28Q9NRJ3 127 aa13.69□□□□□ -0.22
CHRD-205ENST00000448472 TREM2Q9NZC2 230 aa13.69□□□□□ -0.22
CHRD-205ENST00000448472 KIAA1456Q9P272 454 aa13.69□□□□□ -0.22
CHRD-205ENST00000448472 HSF4Q9ULV5 492 aa13.69□□□□□ -0.22
CHRD-205ENST00000448472 SEC14L6B5MCN3 397 aa13.69□□□□□ -0.22
CHRD-205ENST00000448472 CCL2P13500 99 aa13.69□□□□□ -0.22
CHRD-205ENST00000448472 HLA-DRB3P79483 266 aa13.69□□□□□ -0.22
CHRD-205ENST00000448472 RSPO1Q2MKA7 263 aaPredicted RBP13.69□□□□□ -0.22
CHRD-205ENST00000448472 LHFPL2Q6ZUX7 228 aa13.69□□□□□ -0.22
CHRD-205ENST00000448472 AAED1Q7RTV5 226 aa13.69□□□□□ -0.22
CHRD-205ENST00000448472 C1orf87Q8N0U7 546 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms