RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 RASL11AQ6T310 242 aa3.3□□□□□ -1.88
SHPRH-205ENST00000433355 PPP1R1CQ8WVI7 109 aa3.3□□□□□ -1.88
SHPRH-205ENST00000433355 TAAR8Q969N4 342 aa3.3□□□□□ -1.88
SHPRH-205ENST00000433355 BORCS7Q96B45 105 aa3.3□□□□□ -1.88
SHPRH-205ENST00000433355 SLC35E1Q96K37 410 aa3.3□□□□□ -1.88
SHPRH-205ENST00000433355 C1QTNF6Q9BXI9 259 aa3.3□□□□□ -1.88
SHPRH-205ENST00000433355 hADV38S2A0JD32 116 aa3.3□□□□□ -1.88
SHPRH-205ENST00000433355 C11orf98E9PRG8 122 aa3.3□□□□□ -1.88
SHPRH-205ENST00000433355 F8W036 122 aa3.3□□□□□ -1.88
SHPRH-205ENST00000433355 HPXP02790 462 aa3.3□□□□□ -1.88
SHPRH-205ENST00000433355 CDKN2AP42771 156 aaKnown RBP3.3□□□□□ -1.88
SHPRH-205ENST00000433355 COTL1Q14019 142 aa3.3□□□□□ -1.88
SHPRH-205ENST00000433355 ATXN7L1Q9ULK2 861 aaPredicted RBP3.3□□□□□ -1.88
SHPRH-205ENST00000433355 V9GYS6 101 aa3.3□□□□□ -1.88
SHPRH-205ENST00000433355 DCDC2BA2VCK2 349 aa3.3□□□□□ -1.88
SHPRH-205ENST00000433355 TNFSF11O14788 317 aa3.3□□□□□ -1.88
SHPRH-205ENST00000433355 SULT1A2P50226 295 aa3.3□□□□□ -1.88
SHPRH-205ENST00000433355 SNU13P55769 128 aaKnown RBP3.3□□□□□ -1.88
SHPRH-205ENST00000433355 INPP5JQ15735 1006 aaPredicted RBP3.3□□□□□ -1.88
SHPRH-205ENST00000433355 TMEM41BQ5BJD5 291 aa3.3□□□□□ -1.88
SHPRH-205ENST00000433355 ARSJQ5FYB0 599 aaPredicted RBP3.3□□□□□ -1.88
SHPRH-205ENST00000433355 DHRS11Q6UWP2 260 aa3.3□□□□□ -1.88
SHPRH-205ENST00000433355 THSD4Q6ZMP0 1018 aa3.3□□□□□ -1.88
SHPRH-205ENST00000433355 SORBS1Q9BX66 1292 aaKnown RBP3.3□□□□□ -1.88
SHPRH-205ENST00000433355 GNG12Q9UBI6 72 aa3.3□□□□□ -1.88
SHPRH-205ENST00000433355 MGAM2Q2M2H8 2515 aa3.3□□□□□ -1.88
SHPRH-205ENST00000433355 ZNF205O95201 554 aa3.3□□□□□ -1.88
SHPRH-205ENST00000433355 CD3DP04234 171 aa3.3□□□□□ -1.88
SHPRH-205ENST00000433355 BCL2P10415 239 aa3.3□□□□□ -1.88
SHPRH-205ENST00000433355 MC5RP33032 325 aa3.3□□□□□ -1.88
SHPRH-205ENST00000433355 CD80P33681 288 aa3.3□□□□□ -1.88
SHPRH-205ENST00000433355 RBM45Q8IUH3 476 aaKnown RBP3.3□□□□□ -1.88
SHPRH-205ENST00000433355 GPR82Q96P67 336 aa3.3□□□□□ -1.88
SHPRH-205ENST00000433355 TMEM147Q9BVK8 224 aa3.3□□□□□ -1.88
SHPRH-205ENST00000433355 PILRBQ9UKJ0 227 aa3.3□□□□□ -1.88
SHPRH-205ENST00000433355 CTXND1A0A1B0GTU2 59 aa3.3□□□□□ -1.88
SHPRH-205ENST00000433355 PQLC2LA1A4F0 135 aa3.3□□□□□ -1.88
SHPRH-205ENST00000433355 CLEC18AA5D8T8 446 aa3.3□□□□□ -1.88
SHPRH-205ENST00000433355 HLA-DQA1P01909 254 aa3.3□□□□□ -1.88
SHPRH-205ENST00000433355 CHRNB4P30926 498 aa3.3□□□□□ -1.88
SHPRH-205ENST00000433355 SSX6Q7RTT6 188 aa3.3□□□□□ -1.88
SHPRH-205ENST00000433355 CALHM1Q8IU99 346 aa3.3□□□□□ -1.88
SHPRH-205ENST00000433355 C12orf76Q8N812 135 aaPredicted RBP3.3□□□□□ -1.88
SHPRH-205ENST00000433355 CLEC18CQ8NCF0 446 aa3.3□□□□□ -1.88
SHPRH-205ENST00000433355 OR10Q1Q8NGQ4 319 aa3.3□□□□□ -1.88
SHPRH-205ENST00000433355 DOK5Q9P104 306 aa3.3□□□□□ -1.88
SHPRH-205ENST00000433355 ATP23Q9Y6H3 246 aa3.3□□□□□ -1.88
SHPRH-205ENST00000433355 C1QTNF9BB2RNN3 333 aa3.3□□□□□ -1.88
SHPRH-205ENST00000433355 PNPP00491 289 aa3.3□□□□□ -1.88
SHPRH-205ENST00000433355 PEBP1P30086 187 aaKnown RBP3.3□□□□□ -1.88
SHPRH-205ENST00000433355 CCKARP32238 428 aa3.3□□□□□ -1.88
SHPRH-205ENST00000433355 RHOBP62745 196 aa3.3□□□□□ -1.88
SHPRH-205ENST00000433355 NKX6-1P78426 367 aaPredicted RBP3.3□□□□□ -1.88
SHPRH-205ENST00000433355 ZXDBP98169 803 aa3.3□□□□□ -1.88
SHPRH-205ENST00000433355 C2orf76Q3KRA6 126 aa3.3□□□□□ -1.88
SHPRH-205ENST00000433355 RNFT1Q5M7Z0 435 aa3.3□□□□□ -1.88
SHPRH-205ENST00000433355 LRRTM1Q86UE6 522 aa3.3□□□□□ -1.88
SHPRH-205ENST00000433355 CCDC74BQ96LY2 380 aa3.3□□□□□ -1.88
SHPRH-205ENST00000433355 TMPRSS5Q9H3S3 457 aa3.3□□□□□ -1.88
SHPRH-205ENST00000433355 SLC35D1Q9NTN3 355 aa3.3□□□□□ -1.88
SHPRH-205ENST00000433355 ZMIZ1Q9ULJ6 1067 aa3.3□□□□□ -1.88
SHPRH-205ENST00000433355 SOX2P48431 317 aa3.29□□□□□ -1.88
SHPRH-205ENST00000433355 LIAT1Q6ZQX7 453 aa3.29□□□□□ -1.88
SHPRH-205ENST00000433355 SLC25A38Q96DW6 304 aa3.29□□□□□ -1.88
SHPRH-205ENST00000433355 MRPL32Q9BYC8 188 aaKnown RBP3.29□□□□□ -1.88
SHPRH-205ENST00000433355 G6PC2Q9NQR9 355 aa3.29□□□□□ -1.88
SHPRH-205ENST00000433355 TM7SF3Q9NS93 570 aa3.29□□□□□ -1.88
SHPRH-205ENST00000433355 GPR132Q9UNW8 380 aa3.29□□□□□ -1.88
SHPRH-205ENST00000433355 NTN3O00634 580 aaPredicted RBP3.29□□□□□ -1.88
SHPRH-205ENST00000433355 DEDDO75618 318 aa3.29□□□□□ -1.88
SHPRH-205ENST00000433355 NMBP08949 121 aa3.29□□□□□ -1.88
SHPRH-205ENST00000433355 VSIG8P0DPA2 414 aa3.29□□□□□ -1.88
SHPRH-205ENST00000433355 FOLR2P14207 255 aa3.29□□□□□ -1.88
SHPRH-205ENST00000433355 CLDN17P56750 224 aa3.29□□□□□ -1.88
SHPRH-205ENST00000433355 CLDN2P57739 230 aa3.29□□□□□ -1.88
SHPRH-205ENST00000433355 LINC00303Q3SY05 128 aa3.29□□□□□ -1.88
SHPRH-205ENST00000433355 FAM57BQ71RH2 274 aa3.29□□□□□ -1.88
SHPRH-205ENST00000433355 PNKDQ8N490 385 aa3.29□□□□□ -1.88
SHPRH-205ENST00000433355 LILRA3Q8N6C8 439 aaPredicted RBP3.29□□□□□ -1.88
SHPRH-205ENST00000433355 OR10X1Q8NGY0 326 aa3.29□□□□□ -1.88
SHPRH-205ENST00000433355 OSR1Q8TAX0 266 aaPredicted RBP3.29□□□□□ -1.88
SHPRH-205ENST00000433355 ADAMTS17Q8TE56 1095 aa3.29□□□□□ -1.88
SHPRH-205ENST00000433355 TMEM167BQ9NRX6 74 aa3.29□□□□□ -1.88
SHPRH-205ENST00000433355 P4HTMQ9NXG6 502 aa3.29□□□□□ -1.88
SHPRH-205ENST00000433355 CPAMD8Q8IZJ3 1885 aa3.29□□□□□ -1.88
SHPRH-205ENST00000433355 TMEM8BA6NDV4 472 aa3.29□□□□□ -1.88
SHPRH-205ENST00000433355 ZNF732B4DXR9 585 aa3.29□□□□□ -1.88
SHPRH-205ENST00000433355 OR7C1O76099 320 aaPredicted RBP3.29□□□□□ -1.88
SHPRH-205ENST00000433355 NAPSAO96009 420 aa3.29□□□□□ -1.88
SHPRH-205ENST00000433355 OR5AC1P0C628 307 aa3.29□□□□□ -1.88
SHPRH-205ENST00000433355 CEACAM1P13688 526 aa3.29□□□□□ -1.88
SHPRH-205ENST00000433355 SPCS3P61009 180 aa3.29□□□□□ -1.88
SHPRH-205ENST00000433355 APCDD1LQ8NCL9 501 aa3.29□□□□□ -1.88
SHPRH-205ENST00000433355 PPP1R14AQ96A00 147 aa3.29□□□□□ -1.88
SHPRH-205ENST00000433355 CMBLQ96DG6 245 aa3.29□□□□□ -1.88
SHPRH-205ENST00000433355 SMIM8Q96KF7 97 aa3.29□□□□□ -1.88
SHPRH-205ENST00000433355 RHNO1Q9BSD3 238 aa3.29□□□□□ -1.88
SHPRH-205ENST00000433355 MS4A5Q9H3V2 200 aa3.29□□□□□ -1.88
SHPRH-205ENST00000433355 GALNT9Q9HCQ5 603 aa3.29□□□□□ -1.88
SHPRH-205ENST00000433355 C1RLQ9NZP8 487 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms