RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 OR14A2Q96R54 314 aa12.32□□□□□ -0.44
USB1-202ENST00000423271 MEGF9Q9H1U4 602 aa12.32□□□□□ -0.44
USB1-202ENST00000423271 SIGLEC9Q9Y336 463 aa12.32□□□□□ -0.44
USB1-202ENST00000423271 hCG_1809904A0A1W2PP81 198 aa12.31□□□□□ -0.44
USB1-202ENST00000423271 A0A1W2PPE2 198 aa12.31□□□□□ -0.44
USB1-202ENST00000423271 A0A1W2PR64 198 aa12.31□□□□□ -0.44
USB1-202ENST00000423271 A0A1W2PRV1 198 aa12.31□□□□□ -0.44
USB1-202ENST00000423271 MEGF11A6BM72 1044 aa12.31□□□□□ -0.44
USB1-202ENST00000423271 M0QZ24 198 aa12.31□□□□□ -0.44
USB1-202ENST00000423271 OCMP0CE72 109 aaPredicted RBP12.31□□□□□ -0.44
USB1-202ENST00000423271 HSMCR30P0CW71 290 aa12.31□□□□□ -0.44
USB1-202ENST00000423271 ZNF728P0DKX0 622 aa12.31□□□□□ -0.44
USB1-202ENST00000423271 MTCP1P56278 107 aa12.31□□□□□ -0.44
USB1-202ENST00000423271 PLA1AQ53H76 456 aa12.31□□□□□ -0.44
USB1-202ENST00000423271 ZNF529Q6P280 563 aa12.31□□□□□ -0.44
USB1-202ENST00000423271 CRIP3Q6Q6R5 217 aa12.31□□□□□ -0.44
USB1-202ENST00000423271 LHFPL2Q6ZUX7 228 aa12.31□□□□□ -0.44
USB1-202ENST00000423271 GDPD3Q7L5L3 318 aa12.31□□□□□ -0.44
USB1-202ENST00000423271 ZNF367Q7RTV3 350 aa12.31□□□□□ -0.44
USB1-202ENST00000423271 OR52N4Q8NGI2 321 aa12.31□□□□□ -0.44
USB1-202ENST00000423271 OR51A2Q8NGJ7 313 aa12.31□□□□□ -0.44
USB1-202ENST00000423271 UFD1Q92890 307 aa12.31□□□□□ -0.44
USB1-202ENST00000423271 SNX22Q96L94 193 aa12.31□□□□□ -0.44
USB1-202ENST00000423271 CHST6Q9GZX3 395 aa12.31□□□□□ -0.44
USB1-202ENST00000423271 TCF7L1Q9HCS4 588 aa12.31□□□□□ -0.44
USB1-202ENST00000423271 ISYNA1Q9NPH2 558 aa12.31□□□□□ -0.44
USB1-202ENST00000423271 ACOT13Q9NPJ3 140 aa12.31□□□□□ -0.44
USB1-202ENST00000423271 LRRC42Q9Y546 428 aa12.31□□□□□ -0.44
USB1-202ENST00000423271 TRBV5-7A0A0A0MS05 114 aa12.3□□□□□ -0.44
USB1-202ENST00000423271 IGKV1-12A0A0C4DH73 117 aa12.3□□□□□ -0.44
USB1-202ENST00000423271 A0A1W2PPK0 400 aa12.3□□□□□ -0.44
USB1-202ENST00000423271 ODF3BA8MYP8 253 aa12.3□□□□□ -0.44
USB1-202ENST00000423271 TIMM23O14925 209 aa12.3□□□□□ -0.44
USB1-202ENST00000423271 CHST1O43916 411 aa12.3□□□□□ -0.44
USB1-202ENST00000423271 PSPNO60542 156 aa12.3□□□□□ -0.44
USB1-202ENST00000423271 MRPS14O60783 128 aaKnown RBP12.3□□□□□ -0.44
USB1-202ENST00000423271 ALX3O95076 343 aa12.3□□□□□ -0.44
USB1-202ENST00000423271 IGKV1D-12P01611 117 aa12.3□□□□□ -0.44
USB1-202ENST00000423271 HCKP08631 526 aa12.3□□□□□ -0.44
USB1-202ENST00000423271 PRKACAP17612 351 aa12.3□□□□□ -0.44
USB1-202ENST00000423271 RAB3AP20336 220 aa12.3□□□□□ -0.44
USB1-202ENST00000423271 GABRA5P31644 462 aa12.3□□□□□ -0.44
USB1-202ENST00000423271 LGALS4P56470 323 aa12.3□□□□□ -0.44
USB1-202ENST00000423271 EMX1Q04741 257 aaPredicted RBP12.3□□□□□ -0.44
USB1-202ENST00000423271 MLLT11Q13015 90 aaPredicted RBP12.3□□□□□ -0.44
USB1-202ENST00000423271 TPBGQ13641 420 aa12.3□□□□□ -0.44
USB1-202ENST00000423271 INSL4Q14641 139 aa12.3□□□□□ -0.44
USB1-202ENST00000423271 LDLRAD2Q5SZI1 272 aa12.3□□□□□ -0.44
USB1-202ENST00000423271 LIPKQ5VXJ0 399 aa12.3□□□□□ -0.44
USB1-202ENST00000423271 Q8IYB0 196 aa12.3□□□□□ -0.44
USB1-202ENST00000423271 SPARTQ8N0X7 666 aa12.3□□□□□ -0.44
USB1-202ENST00000423271 FAM58AQ8N1B3 248 aa12.3□□□□□ -0.44
USB1-202ENST00000423271 SVOPQ8N4V2 548 aa12.3□□□□□ -0.44
USB1-202ENST00000423271 OR4S1Q8NGB4 309 aa12.3□□□□□ -0.44
USB1-202ENST00000423271 PIFOQ8TCI5 191 aa12.3□□□□□ -0.44
USB1-202ENST00000423271 DERL3Q96Q80 235 aa12.3□□□□□ -0.44
USB1-202ENST00000423271 MGLLQ99685 303 aa12.3□□□□□ -0.44
USB1-202ENST00000423271 TMED9Q9BVK6 235 aa12.3□□□□□ -0.44
USB1-202ENST00000423271 FAM90A8PA6NJQ4 464 aa12.29□□□□□ -0.44
USB1-202ENST00000423271 PIN1P1O15428 100 aa12.29□□□□□ -0.44
USB1-202ENST00000423271 TSPAN15O95858 294 aa12.29□□□□□ -0.44
USB1-202ENST00000423271 ARG1P05089 322 aa12.29□□□□□ -0.44
USB1-202ENST00000423271 IGHV1-8P0DP01 117 aa12.29□□□□□ -0.44
USB1-202ENST00000423271 GABRR1P24046 479 aa12.29□□□□□ -0.44
USB1-202ENST00000423271 PDZK1IP1Q13113 114 aa12.29□□□□□ -0.44
USB1-202ENST00000423271 GPR50Q13585 617 aa12.29□□□□□ -0.44
USB1-202ENST00000423271 GRK1Q15835 563 aa12.29□□□□□ -0.44
USB1-202ENST00000423271 AANATQ16613 207 aa12.29□□□□□ -0.44
USB1-202ENST00000423271 KCTD21Q4G0X4 260 aa12.29□□□□□ -0.44
USB1-202ENST00000423271 HIST2H2BDQ6DRA6 164 aa12.29□□□□□ -0.44
USB1-202ENST00000423271 OR5D18Q8NGL1 313 aa12.29□□□□□ -0.44
USB1-202ENST00000423271 ZNF714Q96N38 554 aa12.29□□□□□ -0.44
USB1-202ENST00000423271 NEK6Q9HC98 313 aa12.29□□□□□ -0.44
USB1-202ENST00000423271 FBLN5Q9UBX5 448 aa12.29□□□□□ -0.44
USB1-202ENST00000423271 TRAV8-7A0A075B6U6 113 aa12.28□□□□□ -0.44
USB1-202ENST00000423271 SIRPB1O00241 398 aa12.28□□□□□ -0.44
USB1-202ENST00000423271 CYB5AP00167 134 aa12.28□□□□□ -0.44
USB1-202ENST00000423271 RBP4P02753 201 aa12.28□□□□□ -0.44
USB1-202ENST00000423271 CPEP16870 476 aa12.28□□□□□ -0.44
USB1-202ENST00000423271 IGFBP3P17936 291 aaPredicted RBP12.28□□□□□ -0.44
USB1-202ENST00000423271 OR3A1P47881 315 aa12.28□□□□□ -0.44
USB1-202ENST00000423271 RAB13P51153 203 aa12.28□□□□□ -0.44
USB1-202ENST00000423271 RPS25P62851 125 aaKnown RBP12.28□□□□□ -0.44
USB1-202ENST00000423271 PPP3R1P63098 170 aa12.28□□□□□ -0.44
USB1-202ENST00000423271 DEFA6Q01524 100 aa12.28□□□□□ -0.44
USB1-202ENST00000423271 MEF2CQ06413 473 aaPredicted RBP12.28□□□□□ -0.44
USB1-202ENST00000423271 ZNF146Q15072 292 aa12.28□□□□□ -0.44
USB1-202ENST00000423271 KISS1Q15726 138 aa12.28□□□□□ -0.44
USB1-202ENST00000423271 ACSM3Q53FZ2 586 aa12.28□□□□□ -0.44
USB1-202ENST00000423271 ZNF626Q68DY1 528 aa12.28□□□□□ -0.44
USB1-202ENST00000423271 ZNF773Q6PK81 442 aa12.28□□□□□ -0.44
USB1-202ENST00000423271 MS4A15Q8N5U1 240 aa12.28□□□□□ -0.44
USB1-202ENST00000423271 OR13D1Q8NGV5 346 aa12.28□□□□□ -0.44
USB1-202ENST00000423271 TMEM203Q969S6 136 aa12.28□□□□□ -0.44
USB1-202ENST00000423271 NKX3-1Q99801 234 aaPredicted RBP12.28□□□□□ -0.44
USB1-202ENST00000423271 MMP27Q9H306 513 aa12.28□□□□□ -0.44
USB1-202ENST00000423271 SEBOXQ9HB31 216 aaPredicted RBP12.28□□□□□ -0.44
USB1-202ENST00000423271 HMG20AQ9NP66 347 aa12.28□□□□□ -0.44
USB1-202ENST00000423271 KIAA2026Q5HYC2 2103 aa12.28□□□□□ -0.44
USB1-202ENST00000423271 TET2Q6N021 2002 aaPredicted RBP12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms