RNA–Protein interactions for RNA: ENST00000422991.1

COL7A1-202, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-202ENST00000422991 SCN1BQ07699 218 aa14.09□□□□□ -0.15
COL7A1-202ENST00000422991 PLA2G7Q13093 441 aa14.09□□□□□ -0.15
COL7A1-202ENST00000422991 OR8H2Q8N162 312 aa14.09□□□□□ -0.15
COL7A1-202ENST00000422991 LGALS14Q8TCE9 139 aa14.09□□□□□ -0.15
COL7A1-202ENST00000422991 POM121Q96HA1 1249 aa14.09□□□□□ -0.15
COL7A1-202ENST00000422991 SNX22Q96L94 193 aa14.09□□□□□ -0.15
COL7A1-202ENST00000422991 SHARPINQ9H0F6 387 aa14.09□□□□□ -0.15
COL7A1-202ENST00000422991 LPAR5Q9H1C0 372 aa14.09□□□□□ -0.15
COL7A1-202ENST00000422991 LPAR2Q9HBW0 351 aa14.09□□□□□ -0.15
COL7A1-202ENST00000422991 RCC2Q9P258 522 aaKnown RBP14.09□□□□□ -0.15
COL7A1-202ENST00000422991 ARHGAP32A7KAX9 2087 aa14.08□□□□□ -0.15
COL7A1-202ENST00000422991 CSPG4Q6UVK1 2322 aa14.08□□□□□ -0.16
COL7A1-202ENST00000422991 A0A0A6YYD4 124 aa14.08□□□□□ -0.16
COL7A1-202ENST00000422991 GPR37O15354 613 aa14.08□□□□□ -0.16
COL7A1-202ENST00000422991 PAHP00439 452 aa14.08□□□□□ -0.16
COL7A1-202ENST00000422991 ZNF16P17020 682 aaPredicted RBP14.08□□□□□ -0.16
COL7A1-202ENST00000422991 RAB6AP20340 208 aa14.08□□□□□ -0.16
COL7A1-202ENST00000422991 EFNB2P52799 333 aa14.08□□□□□ -0.16
COL7A1-202ENST00000422991 C11orf91Q3C1V1 193 aa14.08□□□□□ -0.16
COL7A1-202ENST00000422991 CYB5R2Q6BCY4 276 aa14.08□□□□□ -0.16
COL7A1-202ENST00000422991 PTX4Q96A99 478 aa14.08□□□□□ -0.16
COL7A1-202ENST00000422991 NICN1Q9BSH3 213 aa14.08□□□□□ -0.16
COL7A1-202ENST00000422991 URM1Q9BTM9 101 aaKnown RBP14.08□□□□□ -0.16
COL7A1-202ENST00000422991 CHST6Q9GZX3 395 aa14.08□□□□□ -0.16
COL7A1-202ENST00000422991 GSX1Q9H4S2 264 aaPredicted RBP14.08□□□□□ -0.16
COL7A1-202ENST00000422991 RAB22AQ9UL26 194 aa14.08□□□□□ -0.16
COL7A1-202ENST00000422991 DSCAML1Q8TD84 2053 aa14.08□□□□□ -0.16
COL7A1-202ENST00000422991 SMIM31A0A1B0GVY4 71 aa14.07□□□□□ -0.16
COL7A1-202ENST00000422991 CCDC160A6NGH7 325 aa14.07□□□□□ -0.16
COL7A1-202ENST00000422991 C22orf46C9J442 243 aa14.07□□□□□ -0.16
COL7A1-202ENST00000422991 ZNF701M0R085 212 aaPredicted RBP14.07□□□□□ -0.16
COL7A1-202ENST00000422991 NDUFB7P17568 137 aa14.07□□□□□ -0.16
COL7A1-202ENST00000422991 PAX2Q02962 417 aa14.07□□□□□ -0.16
COL7A1-202ENST00000422991 GRK1Q15835 563 aa14.07□□□□□ -0.16
COL7A1-202ENST00000422991 PAN3Q58A45 887 aaKnown RBP14.07□□□□□ -0.16
COL7A1-202ENST00000422991 SIGIRRQ6IA17 410 aa14.07□□□□□ -0.16
COL7A1-202ENST00000422991 METAP1DQ6UB28 335 aaPredicted RBP14.07□□□□□ -0.16
COL7A1-202ENST00000422991 FAM89BQ8N5H3 189 aa14.07□□□□□ -0.16
COL7A1-202ENST00000422991 SUMF2Q8NBJ7 301 aa14.07□□□□□ -0.16
COL7A1-202ENST00000422991 OR4S1Q8NGB4 309 aa14.07□□□□□ -0.16
COL7A1-202ENST00000422991 PPP1R35Q8TAP8 253 aa14.07□□□□□ -0.16
COL7A1-202ENST00000422991 DACT3Q96B18 629 aaPredicted RBP14.07□□□□□ -0.16
COL7A1-202ENST00000422991 MRI1Q9BV20 369 aa14.07□□□□□ -0.16
COL7A1-202ENST00000422991 PPA2Q9H2U2 334 aa14.07□□□□□ -0.16
COL7A1-202ENST00000422991 SPACA1Q9HBV2 294 aa14.07□□□□□ -0.16
COL7A1-202ENST00000422991 ABRACLQ9P1F3 81 aa14.07□□□□□ -0.16
COL7A1-202ENST00000422991 RSL24D1Q9UHA3 163 aaKnown RBP14.07□□□□□ -0.16
COL7A1-202ENST00000422991 ETV7Q9Y603 341 aa14.07□□□□□ -0.16
COL7A1-202ENST00000422991 NSD1Q96L73 2696 aaPredicted RBP14.07□□□□□ -0.16
COL7A1-202ENST00000422991 LOC105371242A0A075B767 164 aa14.06□□□□□ -0.16
COL7A1-202ENST00000422991 TRAV20A0A0B4J274 112 aa14.06□□□□□ -0.16
COL7A1-202ENST00000422991 DPPA5A6NC42 116 aa14.06□□□□□ -0.16
COL7A1-202ENST00000422991 HSPB6O14558 160 aa14.06□□□□□ -0.16
COL7A1-202ENST00000422991 MGST3O14880 152 aa14.06□□□□□ -0.16
COL7A1-202ENST00000422991 PDCD6O75340 191 aa14.06□□□□□ -0.16
COL7A1-202ENST00000422991 ECDO95905 644 aaPredicted RBP14.06□□□□□ -0.16
COL7A1-202ENST00000422991 CSN2P05814 226 aa14.06□□□□□ -0.16
COL7A1-202ENST00000422991 RORCP51449 518 aa14.06□□□□□ -0.16
COL7A1-202ENST00000422991 ATAD3CQ5T2N8 411 aa14.06□□□□□ -0.16
COL7A1-202ENST00000422991 CD276Q5ZPR3 534 aa14.06□□□□□ -0.16
COL7A1-202ENST00000422991 BTN2A1Q7KYR7 527 aa14.06□□□□□ -0.16
COL7A1-202ENST00000422991 OR5D13Q8NGL4 314 aa14.06□□□□□ -0.16
COL7A1-202ENST00000422991 OR5H6Q8NGV6 325 aa14.06□□□□□ -0.16
COL7A1-202ENST00000422991 DYNC2LI1Q8TCX1 351 aa14.06□□□□□ -0.16
COL7A1-202ENST00000422991 H1FXQ92522 213 aaKnown RBP14.06□□□□□ -0.16
COL7A1-202ENST00000422991 KCTD12Q96CX2 325 aaKnown RBP14.06□□□□□ -0.16
COL7A1-202ENST00000422991 DCTN5Q9BTE1 182 aa14.06□□□□□ -0.16
COL7A1-202ENST00000422991 DPCDQ9BVM2 203 aaPredicted RBP14.06□□□□□ -0.16
COL7A1-202ENST00000422991 RPUSD1Q9UJJ7 312 aaKnown RBP14.06□□□□□ -0.16
COL7A1-202ENST00000422991 TRBV23-1A0A0A0MS06 115 aa14.05□□□□□ -0.16
COL7A1-202ENST00000422991 PPIAL4CA0A0B4J2A2 164 aa14.05□□□□□ -0.16
COL7A1-202ENST00000422991 IGHV2-70DA0A0C4DH43 119 aa14.05□□□□□ -0.16
COL7A1-202ENST00000422991 FOXI3A8MTJ6 420 aaPredicted RBP14.05□□□□□ -0.16
COL7A1-202ENST00000422991 CD5LO43866 347 aa14.05□□□□□ -0.16
COL7A1-202ENST00000422991 TGFAP01135 160 aa14.05□□□□□ -0.16
COL7A1-202ENST00000422991 FUT3P21217 361 aa14.05□□□□□ -0.16
COL7A1-202ENST00000422991 CHATP28329 748 aa14.05□□□□□ -0.16
COL7A1-202ENST00000422991 KCNJ3P48549 501 aa14.05□□□□□ -0.16
COL7A1-202ENST00000422991 DVL1P1P54792 670 aaPredicted RBP14.05□□□□□ -0.16
COL7A1-202ENST00000422991 RAB12Q6IQ22 244 aa14.05□□□□□ -0.16
COL7A1-202ENST00000422991 CLEC9AQ6UXN8 241 aa14.05□□□□□ -0.16
COL7A1-202ENST00000422991 GDPD3Q7L5L3 318 aa14.05□□□□□ -0.16
COL7A1-202ENST00000422991 GLCCI1Q86VQ1 547 aa14.05□□□□□ -0.16
COL7A1-202ENST00000422991 C8orf46Q8TAG6 207 aa14.05□□□□□ -0.16
COL7A1-202ENST00000422991 TMEM186Q96B77 213 aa14.05□□□□□ -0.16
COL7A1-202ENST00000422991 SLC25A38Q96DW6 304 aa14.05□□□□□ -0.16
COL7A1-202ENST00000422991 COQ2Q96H96 371 aa14.05□□□□□ -0.16
COL7A1-202ENST00000422991 SMR3AQ99954 134 aa14.05□□□□□ -0.16
COL7A1-202ENST00000422991 CCDC59Q9P031 241 aaKnown RBP14.05□□□□□ -0.16
COL7A1-202ENST00000422991 NDUFA13Q9P0J0 144 aa14.05□□□□□ -0.16
COL7A1-202ENST00000422991 SPATA2Q9UM82 520 aa14.05□□□□□ -0.16
COL7A1-202ENST00000422991 WNK2Q9Y3S1 2297 aa14.04□□□□□ -0.16
COL7A1-202ENST00000422991 H3BUI4 141 aa14.04□□□□□ -0.16
COL7A1-202ENST00000422991 ENSAO43768 121 aaKnown RBP14.04□□□□□ -0.16
COL7A1-202ENST00000422991 VEGFCP49767 419 aa14.04□□□□□ -0.16
COL7A1-202ENST00000422991 P2RX3P56373 397 aa14.04□□□□□ -0.16
COL7A1-202ENST00000422991 PAX5Q02548 391 aa14.04□□□□□ -0.16
COL7A1-202ENST00000422991 DYNC1I2Q13409 638 aaKnown RBP14.04□□□□□ -0.16
COL7A1-202ENST00000422991 EDDM3AQ14507 147 aa14.04□□□□□ -0.16
COL7A1-202ENST00000422991 ATXN7L3Q14CW9 347 aaPredicted RBP14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms