RNA–Protein interactions for RNA: ENST00000421223.5

DDX56-203, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 3,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-203ENST00000421223 AGFG2O95081 481 aa9.4□□□□□ -0.9
DDX56-203ENST00000421223 SELLP14151 372 aa9.4□□□□□ -0.9
DDX56-203ENST00000421223 ZNF44P15621 663 aa9.4□□□□□ -0.9
DDX56-203ENST00000421223 HLA-GP17693 338 aa9.4□□□□□ -0.9
DDX56-203ENST00000421223 AADACP22760 399 aa9.4□□□□□ -0.9
DDX56-203ENST00000421223 WNT5AP41221 380 aa9.4□□□□□ -0.9
DDX56-203ENST00000421223 UBE2NP61088 152 aaKnown RBP9.4□□□□□ -0.9
DDX56-203ENST00000421223 DEFA5Q01523 94 aa9.4□□□□□ -0.9
DDX56-203ENST00000421223 GGNBP1Q5YKI7 109 aa9.4□□□□□ -0.9
DDX56-203ENST00000421223 SUMF1Q8NBK3 374 aa9.4□□□□□ -0.9
DDX56-203ENST00000421223 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.4□□□□□ -0.9
DDX56-203ENST00000421223 DIDO1Q9BTC0 2240 aaKnown RBP9.4□□□□□ -0.9
DDX56-203ENST00000421223 RHBDL1O75783 438 aa9.4□□□□□ -0.9
DDX56-203ENST00000421223 ACTL6AO96019 429 aa9.4□□□□□ -0.9
DDX56-203ENST00000421223 SCTP09683 121 aa9.4□□□□□ -0.9
DDX56-203ENST00000421223 RPS2P15880 293 aaKnown RBP9.4□□□□□ -0.9
DDX56-203ENST00000421223 TNFSF10P50591 281 aa9.4□□□□□ -0.9
DDX56-203ENST00000421223 OR2A2Q6IF42 318 aa9.4□□□□□ -0.9
DDX56-203ENST00000421223 Q6ZSR3 168 aa9.4□□□□□ -0.9
DDX56-203ENST00000421223 MYPOPQ86VE0 399 aaPredicted RBP9.4□□□□□ -0.9
DDX56-203ENST00000421223 CXorf67Q86X51 503 aaPredicted RBP9.4□□□□□ -0.9
DDX56-203ENST00000421223 NMES1Q9C002 83 aa9.4□□□□□ -0.9
DDX56-203ENST00000421223 SLC25A32Q9H2D1 315 aa9.4□□□□□ -0.9
DDX56-203ENST00000421223 FZR1Q9UM11 496 aa9.4□□□□□ -0.9
DDX56-203ENST00000421223 RAB19A4D1S5 217 aa9.39□□□□□ -0.91
DDX56-203ENST00000421223 ZNF724A8MTY0 619 aa9.39□□□□□ -0.91
DDX56-203ENST00000421223 LRP3O75074 770 aa9.39□□□□□ -0.91
DDX56-203ENST00000421223 GRPP07492 148 aa9.39□□□□□ -0.91
DDX56-203ENST00000421223 HOXA4Q00056 320 aaPredicted RBP9.39□□□□□ -0.91
DDX56-203ENST00000421223 ZNF345Q14585 488 aa9.39□□□□□ -0.91
DDX56-203ENST00000421223 NSUN5P2Q63ZY6 315 aa9.39□□□□□ -0.91
DDX56-203ENST00000421223 OR2J1Q9GZK6 312 aa9.39□□□□□ -0.91
DDX56-203ENST00000421223 SLC2A9Q9NRM0 540 aa9.39□□□□□ -0.91
DDX56-203ENST00000421223 HSF4Q9ULV5 492 aa9.39□□□□□ -0.91
DDX56-203ENST00000421223 MUC6Q6W4X9 2439 aa9.39□□□□□ -0.91
DDX56-203ENST00000421223 PCNX1Q96RV3 2341 aa9.39□□□□□ -0.91
DDX56-203ENST00000421223 AGPAT2O15120 278 aa9.39□□□□□ -0.91
DDX56-203ENST00000421223 SFTPCP11686 197 aa9.39□□□□□ -0.91
DDX56-203ENST00000421223 ASCL1P50553 236 aa9.39□□□□□ -0.91
DDX56-203ENST00000421223 SMCO1Q147U7 214 aa9.39□□□□□ -0.91
DDX56-203ENST00000421223 CEACAM21Q3KPI0 293 aa9.39□□□□□ -0.91
DDX56-203ENST00000421223 KRTAP27-1Q3LI81 207 aa9.39□□□□□ -0.91
DDX56-203ENST00000421223 PLEKHN1Q494U1 663 aaPredicted RBP9.39□□□□□ -0.91
DDX56-203ENST00000421223 COLCA1Q6ZS62 124 aa9.39□□□□□ -0.91
DDX56-203ENST00000421223 OR1K1Q8NGR3 316 aa9.39□□□□□ -0.91
DDX56-203ENST00000421223 RASL12Q9NYN1 266 aa9.39□□□□□ -0.91
DDX56-203ENST00000421223 MEMO1Q9Y316 297 aa9.39□□□□□ -0.91
DDX56-203ENST00000421223 ESPL1Q14674 2120 aa9.39□□□□□ -0.91
DDX56-203ENST00000421223 TRIM77I1YAP6 450 aa9.39□□□□□ -0.91
DDX56-203ENST00000421223 HSD17B6O14756 317 aa9.39□□□□□ -0.91
DDX56-203ENST00000421223 NDUFS6O75380 124 aaKnown RBP9.39□□□□□ -0.91
DDX56-203ENST00000421223 CTSDP07339 412 aaPredicted RBP9.39□□□□□ -0.91
DDX56-203ENST00000421223 RCC1P18754 421 aaPredicted RBP9.39□□□□□ -0.91
DDX56-203ENST00000421223 PPA1Q15181 289 aa9.39□□□□□ -0.91
DDX56-203ENST00000421223 ALKBH6Q3KRA9 238 aa9.39□□□□□ -0.91
DDX56-203ENST00000421223 PAN3Q58A45 887 aaKnown RBP9.39□□□□□ -0.91
DDX56-203ENST00000421223 TFAP2EQ6VUC0 442 aa9.39□□□□□ -0.91
DDX56-203ENST00000421223 Q6ZPA2 131 aa9.39□□□□□ -0.91
DDX56-203ENST00000421223 COL27A1Q8IZC6 1860 aaPredicted RBP9.39□□□□□ -0.91
DDX56-203ENST00000421223 OR1S2Q8NGQ3 325 aa9.39□□□□□ -0.91
DDX56-203ENST00000421223 LHFPL5Q8TAF8 219 aa9.39□□□□□ -0.91
DDX56-203ENST00000421223 SPSB4Q96A44 273 aa9.39□□□□□ -0.91
DDX56-203ENST00000421223 CDH20Q9HBT6 801 aa9.39□□□□□ -0.91
DDX56-203ENST00000421223 PQLC2LA1A4F0 135 aa9.38□□□□□ -0.91
DDX56-203ENST00000421223 RPL36A-HNRNPH2H7BZ11 118 aa9.38□□□□□ -0.91
DDX56-203ENST00000421223 TPT1P13693 172 aaKnown RBP9.38□□□□□ -0.91
DDX56-203ENST00000421223 DTYMKP23919 212 aa9.38□□□□□ -0.91
DDX56-203ENST00000421223 PRSS54Q6PEW0 395 aa9.38□□□□□ -0.91
DDX56-203ENST00000421223 BAP18Q8IXM2 172 aa9.38□□□□□ -0.91
DDX56-203ENST00000421223 MRPS24Q96EL2 167 aaKnown RBP9.38□□□□□ -0.91
DDX56-203ENST00000421223 PIK3IP1Q96FE7 263 aa9.38□□□□□ -0.91
DDX56-203ENST00000421223 TMEM231Q9H6L2 316 aa9.38□□□□□ -0.91
DDX56-203ENST00000421223 BARX1Q9HBU1 254 aaPredicted RBP9.38□□□□□ -0.91
DDX56-203ENST00000421223 HEATR1Q9H583 2144 aaKnown RBP9.38□□□□□ -0.91
DDX56-203ENST00000421223 SIRPB1O00241 398 aa9.38□□□□□ -0.91
DDX56-203ENST00000421223 RPL7L1Q6DKI1 246 aaKnown RBP9.38□□□□□ -0.91
DDX56-203ENST00000421223 POC1AQ8NBT0 407 aa9.38□□□□□ -0.91
DDX56-203ENST00000421223 WNT2BQ93097 391 aa9.38□□□□□ -0.91
DDX56-203ENST00000421223 HRH4Q9H3N8 390 aa9.38□□□□□ -0.91
DDX56-203ENST00000421223 OR14J1Q9UGF5 321 aa9.38□□□□□ -0.91
DDX56-203ENST00000421223 PCDHB10Q9UN67 800 aa9.38□□□□□ -0.91
DDX56-203ENST00000421223 UBE2J1Q9Y385 318 aaPredicted RBP9.38□□□□□ -0.91
DDX56-203ENST00000421223 RBM7Q9Y580 266 aaKnown RBP9.38□□□□□ -0.91
DDX56-203ENST00000421223 GTF3C1Q12789 2109 aa9.37□□□□□ -0.91
DDX56-203ENST00000421223 A0A1B0GW55 424 aa9.37□□□□□ -0.91
DDX56-203ENST00000421223 CRYM-AS1A6NIL9 109 aa9.37□□□□□ -0.91
DDX56-203ENST00000421223 CEACAM18A8MTB9 384 aa9.37□□□□□ -0.91
DDX56-203ENST00000421223 K7EPK0 472 aa9.37□□□□□ -0.91
DDX56-203ENST00000421223 GALR2O43603 387 aaPredicted RBP9.37□□□□□ -0.91
DDX56-203ENST00000421223 PPYP01298 95 aa9.37□□□□□ -0.91
DDX56-203ENST00000421223 DUX4L2P0CJ85 424 aa9.37□□□□□ -0.91
DDX56-203ENST00000421223 DUX4L3P0CJ86 424 aa9.37□□□□□ -0.91
DDX56-203ENST00000421223 DUX4L4P0CJ87 422 aa9.37□□□□□ -0.91
DDX56-203ENST00000421223 DUX4L5P0CJ88 424 aa9.37□□□□□ -0.91
DDX56-203ENST00000421223 DUX4L6P0CJ89 424 aa9.37□□□□□ -0.91
DDX56-203ENST00000421223 DUX4L7P0CJ90 424 aa9.37□□□□□ -0.91
DDX56-203ENST00000421223 TMEM11P17152 192 aa9.37□□□□□ -0.91
DDX56-203ENST00000421223 ASCL4Q6XD76 172 aa9.37□□□□□ -0.91
DDX56-203ENST00000421223 FAM71E2Q8N5Q1 922 aa9.37□□□□□ -0.91
DDX56-203ENST00000421223 NANOS1Q8WY41 292 aaKnown RBP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms