RNA–Protein interactions for RNA: ENST00000420009.5

TNFAIP3-202, Transcript of TNF alpha induced protein 3, humanhuman

TSL 3

Gene TNFAIP3, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-202ENST00000420009 RNF152Q8N8N0 203 aa8□□□□□ -1.13
TNFAIP3-202ENST00000420009 TOMM40LQ969M1 308 aa8□□□□□ -1.13
TNFAIP3-202ENST00000420009 RPEQ96AT9 228 aa8□□□□□ -1.13
TNFAIP3-202ENST00000420009 COQ2Q96H96 371 aa8□□□□□ -1.13
TNFAIP3-202ENST00000420009 CNN2Q99439 309 aaKnown RBP8□□□□□ -1.13
TNFAIP3-202ENST00000420009 DCLRE1BQ9H816 532 aa8□□□□□ -1.13
TNFAIP3-202ENST00000420009 GLS2Q9UI32 602 aa8□□□□□ -1.13
TNFAIP3-202ENST00000420009 MRM2Q9UI43 246 aaKnown RBP8□□□□□ -1.13
TNFAIP3-202ENST00000420009 SNX5Q9Y5X3 404 aa8□□□□□ -1.13
TNFAIP3-202ENST00000420009 SMAD5-AS1Q9Y6J3 95 aa8□□□□□ -1.13
TNFAIP3-202ENST00000420009 FUOMA2VDF0 154 aa7.99□□□□□ -1.13
TNFAIP3-202ENST00000420009 OR2H2O95918 312 aa7.99□□□□□ -1.13
TNFAIP3-202ENST00000420009 TMEM11P17152 192 aa7.99□□□□□ -1.13
TNFAIP3-202ENST00000420009 PRKACAP17612 351 aa7.99□□□□□ -1.13
TNFAIP3-202ENST00000420009 CDX1P47902 265 aaPredicted RBP7.99□□□□□ -1.13
TNFAIP3-202ENST00000420009 CXCR4P61073 352 aa7.99□□□□□ -1.13
TNFAIP3-202ENST00000420009 AESQ08117 197 aa7.99□□□□□ -1.13
TNFAIP3-202ENST00000420009 KPNB1Q14974 876 aaKnown RBP7.99□□□□□ -1.13
TNFAIP3-202ENST00000420009 C17orf58Q2M2W7 97 aa7.99□□□□□ -1.13
TNFAIP3-202ENST00000420009 TMEM236Q5W0B7 351 aa7.99□□□□□ -1.13
TNFAIP3-202ENST00000420009 C16orf89Q6UX73 402 aa7.99□□□□□ -1.13
TNFAIP3-202ENST00000420009 DRAM1Q8N682 238 aa7.99□□□□□ -1.13
TNFAIP3-202ENST00000420009 DNAAF1Q8NEP3 725 aa7.99□□□□□ -1.13
TNFAIP3-202ENST00000420009 OR4D6Q8NGJ1 314 aa7.99□□□□□ -1.13
TNFAIP3-202ENST00000420009 OR9G1Q8NH87 305 aa7.99□□□□□ -1.13
TNFAIP3-202ENST00000420009 BORCS8Q96FH0 119 aa7.99□□□□□ -1.13
TNFAIP3-202ENST00000420009 KIRREL1Q96J84 757 aa7.99□□□□□ -1.13
TNFAIP3-202ENST00000420009 MNTQ99583 582 aa7.99□□□□□ -1.13
TNFAIP3-202ENST00000420009 ELAC2Q9BQ52 826 aaKnown RBP7.99□□□□□ -1.13
TNFAIP3-202ENST00000420009 ADGRL4Q9HBW9 690 aa7.99□□□□□ -1.13
TNFAIP3-202ENST00000420009 HMG20AQ9NP66 347 aa7.99□□□□□ -1.13
TNFAIP3-202ENST00000420009 ARL8BQ9NVJ2 186 aa7.99□□□□□ -1.13
TNFAIP3-202ENST00000420009 NDE1Q9NXR1 346 aa7.99□□□□□ -1.13
TNFAIP3-202ENST00000420009 TAGLN3Q9UI15 199 aa7.99□□□□□ -1.13
TNFAIP3-202ENST00000420009 AMMECR1Q9Y4X0 333 aaPredicted RBP7.99□□□□□ -1.13
TNFAIP3-202ENST00000420009 PLECQ15149 4684 aaKnown RBP7.99□□□□□ -1.13
TNFAIP3-202ENST00000420009 IGKV1-9A0A0C4DH69 117 aa7.98□□□□□ -1.13
TNFAIP3-202ENST00000420009 LINC01548A6NM66 108 aa7.98□□□□□ -1.13
TNFAIP3-202ENST00000420009 ZNF729A6NN14 1252 aaPredicted RBP7.98□□□□□ -1.13
TNFAIP3-202ENST00000420009 AP4M1O00189 453 aa7.98□□□□□ -1.13
TNFAIP3-202ENST00000420009 CCRL2O00421 344 aa7.98□□□□□ -1.13
TNFAIP3-202ENST00000420009 SYT7O43581 403 aa7.98□□□□□ -1.13
TNFAIP3-202ENST00000420009 CALCBP10092 127 aa7.98□□□□□ -1.13
TNFAIP3-202ENST00000420009 RAP2AP10114 183 aa7.98□□□□□ -1.13
TNFAIP3-202ENST00000420009 GPR12P47775 334 aa7.98□□□□□ -1.13
TNFAIP3-202ENST00000420009 POU3F4P49335 361 aa7.98□□□□□ -1.13
TNFAIP3-202ENST00000420009 RBP2P50120 134 aa7.98□□□□□ -1.13
TNFAIP3-202ENST00000420009 SNU13P55769 128 aaKnown RBP7.98□□□□□ -1.13
TNFAIP3-202ENST00000420009 ACTR3P61158 418 aa7.98□□□□□ -1.13
TNFAIP3-202ENST00000420009 CFHR3Q02985 330 aa7.98□□□□□ -1.13
TNFAIP3-202ENST00000420009 FOXE3Q13461 319 aa7.98□□□□□ -1.13
TNFAIP3-202ENST00000420009 DIAPH2-AS1Q14236 149 aa7.98□□□□□ -1.13
TNFAIP3-202ENST00000420009 HES1Q14469 280 aa7.98□□□□□ -1.13
TNFAIP3-202ENST00000420009 PNLIPRP3Q17RR3 467 aa7.98□□□□□ -1.13
TNFAIP3-202ENST00000420009 LCNL1Q6ZST4 164 aa7.98□□□□□ -1.13
TNFAIP3-202ENST00000420009 DHFR2Q86XF0 187 aa7.98□□□□□ -1.13
TNFAIP3-202ENST00000420009 CATSPERDQ86XM0 798 aa7.98□□□□□ -1.13
TNFAIP3-202ENST00000420009 SLC35F2Q8IXU6 374 aa7.98□□□□□ -1.13
TNFAIP3-202ENST00000420009 HS3ST5Q8IZT8 346 aa7.98□□□□□ -1.13
TNFAIP3-202ENST00000420009 OR8H3Q8N146 312 aa7.98□□□□□ -1.13
TNFAIP3-202ENST00000420009 CCDC54Q8NEL0 328 aa7.98□□□□□ -1.13
TNFAIP3-202ENST00000420009 C10orf35Q96D05 121 aa7.98□□□□□ -1.13
TNFAIP3-202ENST00000420009 CITED4Q96RK1 184 aa7.98□□□□□ -1.13
TNFAIP3-202ENST00000420009 COMMD4Q9H0A8 199 aa7.98□□□□□ -1.13
TNFAIP3-202ENST00000420009 PALMDQ9NP74 551 aa7.98□□□□□ -1.13
TNFAIP3-202ENST00000420009 EXOSC4Q9NPD3 245 aaKnown RBP7.98□□□□□ -1.13
TNFAIP3-202ENST00000420009 TVP23BQ9NYZ1 205 aa7.98□□□□□ -1.13
TNFAIP3-202ENST00000420009 SIRT4Q9Y6E7 314 aaPredicted RBP7.98□□□□□ -1.13
TNFAIP3-202ENST00000420009 IGKV1-12A0A0C4DH73 117 aa7.97□□□□□ -1.13
TNFAIP3-202ENST00000420009 KBTBD11-OT1A0A1B0GTJ5 212 aa7.97□□□□□ -1.13
TNFAIP3-202ENST00000420009 ZNF670-ZNF695F2Z2N8 137 aa7.97□□□□□ -1.13
TNFAIP3-202ENST00000420009 H3BSH0 61 aa7.97□□□□□ -1.13
TNFAIP3-202ENST00000420009 J3QR06 171 aa7.97□□□□□ -1.13
TNFAIP3-202ENST00000420009 SH2D1BO14796 132 aa7.97□□□□□ -1.13
TNFAIP3-202ENST00000420009 SNX3O60493 162 aa7.97□□□□□ -1.13
TNFAIP3-202ENST00000420009 CYB5AP00167 134 aa7.97□□□□□ -1.13
TNFAIP3-202ENST00000420009 CST1P01037 141 aa7.97□□□□□ -1.13
TNFAIP3-202ENST00000420009 IGKV1D-33P01593 117 aa7.97□□□□□ -1.13
TNFAIP3-202ENST00000420009 IGKV1-33P01594 117 aa7.97□□□□□ -1.13
TNFAIP3-202ENST00000420009 IGKV1D-12P01611 117 aa7.97□□□□□ -1.13
TNFAIP3-202ENST00000420009 ELANEP08246 267 aa7.97□□□□□ -1.13
TNFAIP3-202ENST00000420009 CGB3P0DN86 165 aa7.97□□□□□ -1.13
TNFAIP3-202ENST00000420009 CGB7P0DN87 165 aa7.97□□□□□ -1.13
TNFAIP3-202ENST00000420009 NFYBP25208 207 aa7.97□□□□□ -1.13
TNFAIP3-202ENST00000420009 RAB7AP51149 207 aa7.97□□□□□ -1.13
TNFAIP3-202ENST00000420009 MADCAM1Q13477 382 aa7.97□□□□□ -1.13
TNFAIP3-202ENST00000420009 GPR50Q13585 617 aa7.97□□□□□ -1.13
TNFAIP3-202ENST00000420009 EBI3Q14213 229 aa7.97□□□□□ -1.13
TNFAIP3-202ENST00000420009 HNF4GQ14541 408 aa7.97□□□□□ -1.13
TNFAIP3-202ENST00000420009 ODF4Q2M2E3 257 aa7.97□□□□□ -1.13
TNFAIP3-202ENST00000420009 ZNF260Q3ZCT1 412 aa7.97□□□□□ -1.13
TNFAIP3-202ENST00000420009 CXorf66Q5JRM2 361 aaPredicted RBP7.97□□□□□ -1.13
TNFAIP3-202ENST00000420009 KRBOX4Q5JUW0 171 aa7.97□□□□□ -1.13
TNFAIP3-202ENST00000420009 SSX6Q7RTT6 188 aa7.97□□□□□ -1.13
TNFAIP3-202ENST00000420009 TGIF2LXQ8IUE1 241 aa7.97□□□□□ -1.13
TNFAIP3-202ENST00000420009 Q8N6K4 173 aa7.97□□□□□ -1.13
TNFAIP3-202ENST00000420009 C4orf3Q8WVX3 66 aa7.97□□□□□ -1.13
TNFAIP3-202ENST00000420009 PP6455Q8WZ26 134 aa7.97□□□□□ -1.13
TNFAIP3-202ENST00000420009 TEX12Q9BXU0 123 aa7.97□□□□□ -1.13
TNFAIP3-202ENST00000420009 ABCG5Q9H222 651 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms