RNA–Protein interactions for RNA: ENST00000403904.5

CSNK1E-204, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CSNK1E, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-204ENST00000403904 BPIFB2Q8N4F0 458 aa27.65■■■□□ 2.02
CSNK1E-204ENST00000403904 SUMF2Q8NBJ7 301 aa27.65■■■□□ 2.02
CSNK1E-204ENST00000403904 SNX22Q96L94 193 aa27.65■■■□□ 2.02
CSNK1E-204ENST00000403904 PPA2Q9H2U2 334 aa27.65■■■□□ 2.02
CSNK1E-204ENST00000403904 CLN8Q9UBY8 286 aa27.65■■■□□ 2.02
CSNK1E-204ENST00000403904 YLPM1P49750 1951 aaKnown RBP27.65■■■□□ 2.02
CSNK1E-204ENST00000403904 FLNAP21333 2647 aaKnown RBP27.65■■■□□ 2.02
CSNK1E-204ENST00000403904 HEXAP06865 529 aa27.65■■■□□ 2.02
CSNK1E-204ENST00000403904 PAN3Q58A45 887 aaKnown RBP27.65■■■□□ 2.02
CSNK1E-204ENST00000403904 LRRC10Q5BKY1 277 aa27.65■■■□□ 2.02
CSNK1E-204ENST00000403904 OR4S1Q8NGB4 309 aa27.65■■■□□ 2.02
CSNK1E-204ENST00000403904 OR56B1Q8NGI3 324 aa27.65■■■□□ 2.02
CSNK1E-204ENST00000403904 ST8SIA4Q92187 359 aa27.65■■■□□ 2.02
CSNK1E-204ENST00000403904 PEX16Q9Y5Y5 336 aa27.65■■■□□ 2.02
CSNK1E-204ENST00000403904 ABCA2Q9BZC7 2435 aa27.64■■■□□ 2.02
CSNK1E-204ENST00000403904 H7C1Q1 480 aa27.64■■■□□ 2.01
CSNK1E-204ENST00000403904 PHF1O43189 567 aaPredicted RBP27.64■■■□□ 2.01
CSNK1E-204ENST00000403904 OR3A1P47881 315 aa27.64■■■□□ 2.01
CSNK1E-204ENST00000403904 ESCO2Q56NI9 601 aa27.64■■■□□ 2.01
CSNK1E-204ENST00000403904 UBE2NLQ5JXB2 153 aa27.64■■■□□ 2.01
CSNK1E-204ENST00000403904 NKAPLQ5M9Q1 402 aa27.64■■■□□ 2.01
CSNK1E-204ENST00000403904 WDR25Q64LD2 544 aaPredicted RBP27.64■■■□□ 2.01
CSNK1E-204ENST00000403904 RAB12Q6IQ22 244 aa27.64■■■□□ 2.01
CSNK1E-204ENST00000403904 RTN4RL2Q86UN3 420 aa27.64■■■□□ 2.01
CSNK1E-204ENST00000403904 DPCDQ9BVM2 203 aaPredicted RBP27.64■■■□□ 2.01
CSNK1E-204ENST00000403904 SPACA1Q9HBV2 294 aa27.64■■■□□ 2.01
CSNK1E-204ENST00000403904 RCC2Q9P258 522 aaKnown RBP27.64■■■□□ 2.01
CSNK1E-204ENST00000403904 FAM157AC9JC47 383 aa27.63■■■□□ 2.01
CSNK1E-204ENST00000403904 HPGDSO60760 199 aa27.63■■■□□ 2.01
CSNK1E-204ENST00000403904 NDUFB7P17568 137 aa27.63■■■□□ 2.01
CSNK1E-204ENST00000403904 FUT3P21217 361 aa27.63■■■□□ 2.01
CSNK1E-204ENST00000403904 GNB2P62879 340 aa27.63■■■□□ 2.01
CSNK1E-204ENST00000403904 GRK1Q15835 563 aa27.63■■■□□ 2.01
CSNK1E-204ENST00000403904 FAM189A2Q15884 450 aa27.63■■■□□ 2.01
CSNK1E-204ENST00000403904 CMTM4Q8IZR5 234 aa27.63■■■□□ 2.01
CSNK1E-204ENST00000403904 MCFD2Q8NI22 146 aa27.63■■■□□ 2.01
CSNK1E-204ENST00000403904 SSBP3Q9BWW4 388 aaPredicted RBP27.63■■■□□ 2.01
CSNK1E-204ENST00000403904 CREBBPQ92793 2442 aa27.63■■■□□ 2.01
CSNK1E-204ENST00000403904 ARHGAP32A7KAX9 2087 aa27.63■■■□□ 2.01
CSNK1E-204ENST00000403904 ZANQ9Y493 2812 aa27.62■■■□□ 2.01
CSNK1E-204ENST00000403904 FOXI3A8MTJ6 420 aaPredicted RBP27.62■■■□□ 2.01
CSNK1E-204ENST00000403904 RAB27BO00194 218 aa27.62■■■□□ 2.01
CSNK1E-204ENST00000403904 PDCD6O75340 191 aa27.62■■■□□ 2.01
CSNK1E-204ENST00000403904 CHATP28329 748 aa27.62■■■□□ 2.01
CSNK1E-204ENST00000403904 TMEM50BP56557 158 aa27.62■■■□□ 2.01
CSNK1E-204ENST00000403904 OR8H2Q8N162 312 aa27.62■■■□□ 2.01
CSNK1E-204ENST00000403904 NEDD4LQ96PU5 975 aa27.62■■■□□ 2.01
CSNK1E-204ENST00000403904 C6orf62Q9GZU0 229 aaPredicted RBP27.62■■■□□ 2.01
CSNK1E-204ENST00000403904 FAM234AQ9H0X4 552 aa27.62■■■□□ 2.01
CSNK1E-204ENST00000403904 CTDSP2O14595 271 aa27.61■■■□□ 2.01
CSNK1E-204ENST00000403904 C6orf201Q7Z4U5 140 aa27.61■■■□□ 2.01
CSNK1E-204ENST00000403904 NXF2Q9GZY0 626 aaKnown RBP27.61■■■□□ 2.01
CSNK1E-204ENST00000403904 ABCG5Q9H222 651 aa27.61■■■□□ 2.01
CSNK1E-204ENST00000403904 A0A075B6Q4 140 aa27.6■■■□□ 2.01
CSNK1E-204ENST00000403904 RGS5O15539 181 aa27.6■■■□□ 2.01
CSNK1E-204ENST00000403904 EIF4EP06730 217 aaKnown RBP27.6■■■□□ 2.01
CSNK1E-204ENST00000403904 NPY4RP50391 375 aa27.6■■■□□ 2.01
CSNK1E-204ENST00000403904 ATXN7L3Q14CW9 347 aaPredicted RBP27.6■■■□□ 2.01
CSNK1E-204ENST00000403904 OR10R2Q8NGX6 335 aa27.6■■■□□ 2.01
CSNK1E-204ENST00000403904 PPP1R35Q8TAP8 253 aa27.6■■■□□ 2.01
CSNK1E-204ENST00000403904 SMAD7O15105 426 aaKnown RBP27.6■■■□□ 2.01
CSNK1E-204ENST00000403904 ZFP36P26651 326 aaKnown RBP27.6■■■□□ 2.01
CSNK1E-204ENST00000403904 CNPY1Q3B7I2 92 aa27.6■■■□□ 2.01
CSNK1E-204ENST00000403904 PLAC9Q5JTB6 97 aa27.6■■■□□ 2.01
CSNK1E-204ENST00000403904 OR5D13Q8NGL4 314 aa27.6■■■□□ 2.01
CSNK1E-204ENST00000403904 NEK7Q8TDX7 302 aa27.6■■■□□ 2.01
CSNK1E-204ENST00000403904 ARHGAP5-AS1Q96IT6 56 aa27.6■■■□□ 2.01
CSNK1E-204ENST00000403904 PLEKHJ1Q9NW61 149 aa27.6■■■□□ 2.01
CSNK1E-204ENST00000403904 ING3Q9NXR8 418 aa27.6■■■□□ 2.01
CSNK1E-204ENST00000403904 MCRIP1C9JLW8 97 aa27.59■■■□□ 2.01
CSNK1E-204ENST00000403904 H3BUI4 141 aa27.59■■■□□ 2.01
CSNK1E-204ENST00000403904 LCN2P80188 198 aa27.59■■■□□ 2.01
CSNK1E-204ENST00000403904 EDDM3AQ14507 147 aa27.59■■■□□ 2.01
CSNK1E-204ENST00000403904 Q6ZTK2 550 aa27.59■■■□□ 2.01
CSNK1E-204ENST00000403904 GDPD3Q7L5L3 318 aa27.59■■■□□ 2.01
CSNK1E-204ENST00000403904 FAAP24Q9BTP7 215 aa27.59■■■□□ 2.01
CSNK1E-204ENST00000403904 LPAR2Q9HBW0 351 aa27.59■■■□□ 2.01
CSNK1E-204ENST00000403904 MGST3O14880 152 aa27.58■■■□□ 2.01
CSNK1E-204ENST00000403904 APOA1P02647 267 aa27.58■■■□□ 2.01
CSNK1E-204ENST00000403904 ELK1P19419 428 aa27.58■■■□□ 2.01
CSNK1E-204ENST00000403904 DTX3Q8N9I9 347 aa27.58■■■□□ 2.01
CSNK1E-204ENST00000403904 RAB40AQ8WXH6 277 aa27.58■■■□□ 2.01
CSNK1E-204ENST00000403904 H1FXQ92522 213 aaKnown RBP27.58■■■□□ 2.01
CSNK1E-204ENST00000403904 PHF21AQ96BD5 680 aa27.58■■■□□ 2.01
CSNK1E-204ENST00000403904 RAB3CQ96E17 227 aa27.58■■■□□ 2.01
CSNK1E-204ENST00000403904 S100A16Q96FQ6 103 aaKnown RBP27.58■■■□□ 2.01
CSNK1E-204ENST00000403904 CMTM3Q96MX0 182 aa27.58■■■□□ 2.01
CSNK1E-204ENST00000403904 SULT4A1Q9BR01 284 aa27.58■■■□□ 2.01
CSNK1E-204ENST00000403904 MIXL1Q9H2W2 232 aa27.58■■■□□ 2.01
CSNK1E-204ENST00000403904 UBE2QL1A1L167 161 aa27.57■■■□□ 2
CSNK1E-204ENST00000403904 KIAA1324LA8MWY0 1029 aaPredicted RBP27.57■■■□□ 2
CSNK1E-204ENST00000403904 AESQ08117 197 aa27.57■■■□□ 2
CSNK1E-204ENST00000403904 TMEM249Q2WGJ8 235 aa27.57■■■□□ 2
CSNK1E-204ENST00000403904 BTN2A1Q7KYR7 527 aa27.57■■■□□ 2
CSNK1E-204ENST00000403904 LAX1Q8IWV1 398 aa27.57■■■□□ 2
CSNK1E-204ENST00000403904 TPRX1Q8N7U7 411 aa27.57■■■□□ 2
CSNK1E-204ENST00000403904 PECRQ9BY49 303 aa27.57■■■□□ 2
CSNK1E-204ENST00000403904 ZMAT3Q9HA38 289 aaKnown RBP27.57■■■□□ 2
CSNK1E-204ENST00000403904 CDK2P24941 298 aa27.56■■■□□ 2
CSNK1E-204ENST00000403904 EDDM3BP56851 147 aa27.56■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms