RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 TMEM50BP56557 158 aa13.21□□□□□ -0.3
HMGA1-204ENST00000401473 MPV17LQ2QL34 196 aa13.21□□□□□ -0.3
HMGA1-204ENST00000401473 SNX22Q96L94 193 aa13.21□□□□□ -0.3
HMGA1-204ENST00000401473 ANK3Q12955 4377 aaKnown RBP13.2□□□□□ -0.3
HMGA1-204ENST00000401473 ZNF701M0R085 212 aaPredicted RBP13.2□□□□□ -0.3
HMGA1-204ENST00000401473 HEXAP06865 529 aa13.2□□□□□ -0.3
HMGA1-204ENST00000401473 ZNF182P17025 639 aaPredicted RBP13.2□□□□□ -0.3
HMGA1-204ENST00000401473 CPT2P23786 658 aa13.2□□□□□ -0.3
HMGA1-204ENST00000401473 NPY4RP50391 375 aa13.2□□□□□ -0.3
HMGA1-204ENST00000401473 PAX2Q02962 417 aa13.2□□□□□ -0.3
HMGA1-204ENST00000401473 MOGAT2Q3SYC2 334 aa13.2□□□□□ -0.3
HMGA1-204ENST00000401473 LRRC10Q5BKY1 277 aa13.2□□□□□ -0.3
HMGA1-204ENST00000401473 BTN2A1Q7KYR7 527 aa13.2□□□□□ -0.3
HMGA1-204ENST00000401473 OR8H2Q8N162 312 aa13.2□□□□□ -0.3
HMGA1-204ENST00000401473 SUMF2Q8NBJ7 301 aa13.2□□□□□ -0.3
HMGA1-204ENST00000401473 ST8SIA4Q92187 359 aa13.2□□□□□ -0.3
HMGA1-204ENST00000401473 PTX4Q96A99 478 aa13.2□□□□□ -0.3
HMGA1-204ENST00000401473 DGCR14Q96DF8 476 aaKnown RBP13.2□□□□□ -0.3
HMGA1-204ENST00000401473 PPA2Q9H2U2 334 aa13.2□□□□□ -0.3
HMGA1-204ENST00000401473 SPATA2Q9UM82 520 aa13.2□□□□□ -0.3
HMGA1-204ENST00000401473 A6NHS1 94 aa13.19□□□□□ -0.3
HMGA1-204ENST00000401473 FOXI3A8MTJ6 420 aaPredicted RBP13.19□□□□□ -0.3
HMGA1-204ENST00000401473 A8MXK9 166 aa13.19□□□□□ -0.3
HMGA1-204ENST00000401473 B4DSR2 109 aa13.19□□□□□ -0.3
HMGA1-204ENST00000401473 C22orf46C9J442 243 aa13.19□□□□□ -0.3
HMGA1-204ENST00000401473 NOL3O60936 208 aaKnown RBP13.19□□□□□ -0.3
HMGA1-204ENST00000401473 FOSL1P15407 271 aa13.19□□□□□ -0.3
HMGA1-204ENST00000401473 NDUFB7P17568 137 aa13.19□□□□□ -0.3
HMGA1-204ENST00000401473 VEGFCP49767 419 aa13.19□□□□□ -0.3
HMGA1-204ENST00000401473 ATAD3CQ5T2N8 411 aa13.19□□□□□ -0.3
HMGA1-204ENST00000401473 LINC00596Q86U02 117 aa13.19□□□□□ -0.3
HMGA1-204ENST00000401473 TPRX1Q8N7U7 411 aa13.19□□□□□ -0.3
HMGA1-204ENST00000401473 CHST4Q8NCG5 386 aa13.19□□□□□ -0.3
HMGA1-204ENST00000401473 DACT3Q96B18 629 aaPredicted RBP13.19□□□□□ -0.3
HMGA1-204ENST00000401473 FAM234AQ9H0X4 552 aa13.19□□□□□ -0.3
HMGA1-204ENST00000401473 GSX1Q9H4S2 264 aaPredicted RBP13.19□□□□□ -0.3
HMGA1-204ENST00000401473 ABRACLQ9P1F3 81 aa13.19□□□□□ -0.3
HMGA1-204ENST00000401473 RCC2Q9P258 522 aaKnown RBP13.19□□□□□ -0.3
HMGA1-204ENST00000401473 POLR3KQ9Y2Y1 108 aaPredicted RBP13.19□□□□□ -0.3
HMGA1-204ENST00000401473 HIVEP2P31629 2446 aa13.19□□□□□ -0.3
HMGA1-204ENST00000401473 RAB27BO00194 218 aa13.19□□□□□ -0.3
HMGA1-204ENST00000401473 TMEM127O75204 238 aa13.19□□□□□ -0.3
HMGA1-204ENST00000401473 MSMBP08118 114 aa13.19□□□□□ -0.3
HMGA1-204ENST00000401473 RAB6AP20340 208 aa13.19□□□□□ -0.3
HMGA1-204ENST00000401473 AESQ08117 197 aa13.19□□□□□ -0.3
HMGA1-204ENST00000401473 GRK1Q15835 563 aa13.19□□□□□ -0.3
HMGA1-204ENST00000401473 OR4M1Q8NGD0 313 aa13.19□□□□□ -0.3
HMGA1-204ENST00000401473 SLC25A38Q96DW6 304 aa13.19□□□□□ -0.3
HMGA1-204ENST00000401473 URM1Q9BTM9 101 aaKnown RBP13.19□□□□□ -0.3
HMGA1-204ENST00000401473 DPCDQ9BVM2 203 aaPredicted RBP13.19□□□□□ -0.3
HMGA1-204ENST00000401473 NDUFA13Q9P0J0 144 aa13.19□□□□□ -0.3
HMGA1-204ENST00000401473 PEX16Q9Y5Y5 336 aa13.19□□□□□ -0.3
HMGA1-204ENST00000401473 CUBNO60494 3623 aa13.18□□□□□ -0.3
HMGA1-204ENST00000401473 MEX3AA1L020 520 aaKnown RBP13.18□□□□□ -0.3
HMGA1-204ENST00000401473 FAM90A10PA6NDY2 464 aa13.18□□□□□ -0.3
HMGA1-204ENST00000401473 FAM90A18PA6NE21 464 aa13.18□□□□□ -0.3
HMGA1-204ENST00000401473 FAM90A16PA6NEW6 464 aa13.18□□□□□ -0.3
HMGA1-204ENST00000401473 FAM90A20PA6NIJ5 464 aa13.18□□□□□ -0.3
HMGA1-204ENST00000401473 FAM90A8PA6NJQ4 464 aa13.18□□□□□ -0.3
HMGA1-204ENST00000401473 FAM90A7PA6NKC0 464 aa13.18□□□□□ -0.3
HMGA1-204ENST00000401473 FAM90A22PA8MWA6 464 aa13.18□□□□□ -0.3
HMGA1-204ENST00000401473 FAM90A12PA8MX19 464 aa13.18□□□□□ -0.3
HMGA1-204ENST00000401473 FAM90A5PA8MXJ8 464 aa13.18□□□□□ -0.3
HMGA1-204ENST00000401473 FAM90A23PA8MXZ1 464 aa13.18□□□□□ -0.3
HMGA1-204ENST00000401473 TGFAP01135 160 aa13.18□□□□□ -0.3
HMGA1-204ENST00000401473 FAM90A15PP0C7V4 464 aa13.18□□□□□ -0.3
HMGA1-204ENST00000401473 FAM90A13PP0C7W8 464 aa13.18□□□□□ -0.3
HMGA1-204ENST00000401473 FAM90A14PP0C7W9 464 aa13.18□□□□□ -0.3
HMGA1-204ENST00000401473 FAM90A24PP0C7X0 464 aa13.18□□□□□ -0.3
HMGA1-204ENST00000401473 FUT3P21217 361 aa13.18□□□□□ -0.3
HMGA1-204ENST00000401473 BLVRBP30043 206 aaPredicted RBP13.18□□□□□ -0.3
HMGA1-204ENST00000401473 RANBP1P43487 201 aa13.18□□□□□ -0.3
HMGA1-204ENST00000401473 SCAND1P57086 179 aa13.18□□□□□ -0.3
HMGA1-204ENST00000401473 RAB12Q6IQ22 244 aa13.18□□□□□ -0.3
HMGA1-204ENST00000401473 C6orf201Q7Z4U5 140 aa13.18□□□□□ -0.3
HMGA1-204ENST00000401473 LINC01356Q8N9X3 169 aa13.18□□□□□ -0.3
HMGA1-204ENST00000401473 OR5D13Q8NGL4 314 aa13.18□□□□□ -0.3
HMGA1-204ENST00000401473 POM121Q96HA1 1249 aa13.18□□□□□ -0.3
HMGA1-204ENST00000401473 SLIRPQ9GZT3 109 aaKnown RBP13.18□□□□□ -0.3
HMGA1-204ENST00000401473 COMMD3Q9UBI1 195 aa13.18□□□□□ -0.3
HMGA1-204ENST00000401473 SETD2Q9BYW2 2564 aaPredicted RBP13.18□□□□□ -0.3
HMGA1-204ENST00000401473 LOC105371242A0A075B767 164 aa13.17□□□□□ -0.3
HMGA1-204ENST00000401473 FOXH1O75593 365 aa13.17□□□□□ -0.3
HMGA1-204ENST00000401473 LY6G6DO95868 133 aa13.17□□□□□ -0.3
HMGA1-204ENST00000401473 CHATP28329 748 aa13.17□□□□□ -0.3
HMGA1-204ENST00000401473 ATXN7L3Q14CW9 347 aaPredicted RBP13.17□□□□□ -0.3
HMGA1-204ENST00000401473 PAN3Q58A45 887 aaKnown RBP13.17□□□□□ -0.3
HMGA1-204ENST00000401473 PLAC9Q5JTB6 97 aa13.17□□□□□ -0.3
HMGA1-204ENST00000401473 PLPPR1Q8TBJ4 325 aa13.17□□□□□ -0.3
HMGA1-204ENST00000401473 H1FXQ92522 213 aaKnown RBP13.17□□□□□ -0.3
HMGA1-204ENST00000401473 KCTD12Q96CX2 325 aaKnown RBP13.17□□□□□ -0.3
HMGA1-204ENST00000401473 COQ2Q96H96 371 aa13.17□□□□□ -0.3
HMGA1-204ENST00000401473 DCTN5Q9BTE1 182 aa13.17□□□□□ -0.3
HMGA1-204ENST00000401473 FAAP24Q9BTP7 215 aa13.17□□□□□ -0.3
HMGA1-204ENST00000401473 MRI1Q9BV20 369 aa13.17□□□□□ -0.3
HMGA1-204ENST00000401473 C19orf12Q9NSK7 152 aa13.17□□□□□ -0.3
HMGA1-204ENST00000401473 RHBDL2Q9NX52 303 aa13.17□□□□□ -0.3
HMGA1-204ENST00000401473 ING3Q9NXR8 418 aa13.17□□□□□ -0.3
HMGA1-204ENST00000401473 RPUSD1Q9UJJ7 312 aaKnown RBP13.17□□□□□ -0.3
HMGA1-204ENST00000401473 MGST3O14880 152 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms