RNA–Protein interactions for RNA: ENST00000399976.6

USP16-204, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP16, Length 2,963 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-204ENST00000399976 POU3F4P49335 361 aa6.22□□□□□ -1.41
USP16-204ENST00000399976 COL10A1Q03692 680 aa6.22□□□□□ -1.41
USP16-204ENST00000399976 NEDD8Q15843 81 aa6.22□□□□□ -1.41
USP16-204ENST00000399976 CTF1Q16619 201 aa6.22□□□□□ -1.41
USP16-204ENST00000399976 OR52W1Q6IF63 320 aa6.22□□□□□ -1.41
USP16-204ENST00000399976 SFXN4Q6P4A7 337 aa6.22□□□□□ -1.41
USP16-204ENST00000399976 ZNF497Q6ZNH5 498 aa6.22□□□□□ -1.41
USP16-204ENST00000399976 CIARTQ8N365 385 aaPredicted RBP6.22□□□□□ -1.41
USP16-204ENST00000399976 TMEM86BQ8N661 226 aa6.22□□□□□ -1.41
USP16-204ENST00000399976 DEFB108BQ8NET1 73 aa6.22□□□□□ -1.41
USP16-204ENST00000399976 GAL3ST2Q9H3Q3 398 aa6.22□□□□□ -1.41
USP16-204ENST00000399976 MBNL3Q9NUK0 354 aaKnown RBP6.22□□□□□ -1.41
USP16-204ENST00000399976 TMEM82A0PJX8 343 aa6.21□□□□□ -1.41
USP16-204ENST00000399976 ISPDA4D126 451 aa6.21□□□□□ -1.41
USP16-204ENST00000399976 SPRY1O43609 319 aaPredicted RBP6.21□□□□□ -1.41
USP16-204ENST00000399976 ZNF16P17020 682 aaPredicted RBP6.21□□□□□ -1.41
USP16-204ENST00000399976 PRTN3P24158 256 aa6.21□□□□□ -1.41
USP16-204ENST00000399976 CHATP28329 748 aa6.21□□□□□ -1.41
USP16-204ENST00000399976 CARTPTQ16568 116 aa6.21□□□□□ -1.41
USP16-204ENST00000399976 PNLIPRP3Q17RR3 467 aa6.21□□□□□ -1.41
USP16-204ENST00000399976 MIDNQ504T8 468 aa6.21□□□□□ -1.41
USP16-204ENST00000399976 RSBN1Q5VWQ0 802 aaPredicted RBP6.21□□□□□ -1.41
USP16-204ENST00000399976 LYPD2Q6UXB3 125 aa6.21□□□□□ -1.41
USP16-204ENST00000399976 C15orf40Q8WUR7 153 aa6.21□□□□□ -1.41
USP16-204ENST00000399976 AP3S1Q92572 193 aa6.21□□□□□ -1.41
USP16-204ENST00000399976 FAM3DQ96BQ1 224 aa6.21□□□□□ -1.41
USP16-204ENST00000399976 TMEM59Q9BXS4 323 aa6.21□□□□□ -1.41
USP16-204ENST00000399976 WDR13Q9H1Z4 485 aa6.21□□□□□ -1.41
USP16-204ENST00000399976 RBFOX1Q9NWB1 397 aaKnown RBP6.21□□□□□ -1.41
USP16-204ENST00000399976 SPATA2Q9UM82 520 aa6.21□□□□□ -1.41
USP16-204ENST00000399976 TBL2Q9Y4P3 447 aaKnown RBP6.21□□□□□ -1.41
USP16-204ENST00000399976 TRAV24A0A0B4J272 114 aa6.21□□□□□ -1.42
USP16-204ENST00000399976 SERPINE3A8MV23 424 aa6.21□□□□□ -1.42
USP16-204ENST00000399976 OOSP1A8MZH6 123 aa6.21□□□□□ -1.42
USP16-204ENST00000399976 NPIPB11E5RHQ5 1161 aa6.21□□□□□ -1.42
USP16-204ENST00000399976 DEGS1O15121 323 aa6.21□□□□□ -1.42
USP16-204ENST00000399976 TMPRSS2O15393 492 aa6.21□□□□□ -1.42
USP16-204ENST00000399976 CRLF1O75462 422 aa6.21□□□□□ -1.42
USP16-204ENST00000399976 MAS1P04201 325 aa6.21□□□□□ -1.42
USP16-204ENST00000399976 GSTP1P09211 210 aaKnown RBP6.21□□□□□ -1.42
USP16-204ENST00000399976 ARSBP15848 533 aa6.21□□□□□ -1.42
USP16-204ENST00000399976 ZFP36P26651 326 aaKnown RBP6.21□□□□□ -1.42
USP16-204ENST00000399976 GLP1RP43220 463 aa6.21□□□□□ -1.42
USP16-204ENST00000399976 UNC119Q13432 240 aa6.21□□□□□ -1.42
USP16-204ENST00000399976 C6orf183Q5T699 404 aa6.21□□□□□ -1.42
USP16-204ENST00000399976 DCAF12L2Q5VW00 463 aa6.21□□□□□ -1.42
USP16-204ENST00000399976 C22orf42Q6IC83 251 aa6.21□□□□□ -1.42
USP16-204ENST00000399976 JAGN1Q8N5M9 183 aa6.21□□□□□ -1.42
USP16-204ENST00000399976 CHST6Q9GZX3 395 aa6.21□□□□□ -1.42
USP16-204ENST00000399976 LPAR5Q9H1C0 372 aa6.21□□□□□ -1.42
USP16-204ENST00000399976 OR51E2Q9H255 320 aa6.21□□□□□ -1.42
USP16-204ENST00000399976 GHITMQ9H3K2 345 aa6.21□□□□□ -1.42
USP16-204ENST00000399976 METTL8Q9H825 291 aaKnown RBP6.21□□□□□ -1.42
USP16-204ENST00000399976 ST3GAL6Q9Y274 331 aa6.21□□□□□ -1.42
USP16-204ENST00000399976 ITPR3Q14573 2671 aa6.21□□□□□ -1.42
USP16-204ENST00000399976 METTL21EPA6NDL7 271 aa6.21□□□□□ -1.42
USP16-204ENST00000399976 F8VVB4 439 aa6.21□□□□□ -1.42
USP16-204ENST00000399976 F8VWA3 439 aa6.21□□□□□ -1.42
USP16-204ENST00000399976 MELTFP08582 738 aa6.21□□□□□ -1.42
USP16-204ENST00000399976 GZMHP20718 246 aa6.21□□□□□ -1.42
USP16-204ENST00000399976 DYNLT3P51808 116 aa6.21□□□□□ -1.42
USP16-204ENST00000399976 RIPPLY3P57055 190 aa6.21□□□□□ -1.42
USP16-204ENST00000399976 ERVFRD-1P60508 538 aa6.21□□□□□ -1.42
USP16-204ENST00000399976 PITPNAQ00169 270 aa6.21□□□□□ -1.42
USP16-204ENST00000399976 BAIAP2L2Q6UXY1 529 aa6.21□□□□□ -1.42
USP16-204ENST00000399976 BTN2A1Q7KYR7 527 aa6.21□□□□□ -1.42
USP16-204ENST00000399976 LINC00311Q8N616 119 aa6.21□□□□□ -1.42
USP16-204ENST00000399976 OR11H6Q8NGC7 330 aa6.21□□□□□ -1.42
USP16-204ENST00000399976 CCL13Q99616 98 aa6.21□□□□□ -1.42
USP16-204ENST00000399976 DPCDQ9BVM2 203 aaPredicted RBP6.21□□□□□ -1.42
USP16-204ENST00000399976 NXF2Q9GZY0 626 aaKnown RBP6.21□□□□□ -1.42
USP16-204ENST00000399976 ING4Q9UNL4 249 aa6.21□□□□□ -1.42
USP16-204ENST00000399976 LRBAP50851 2863 aa6.2□□□□□ -1.42
USP16-204ENST00000399976 A0A075B6Q4 140 aa6.2□□□□□ -1.42
USP16-204ENST00000399976 SHISA3A0PJX4 238 aa6.2□□□□□ -1.42
USP16-204ENST00000399976 TMEM30CPA0ZSE6 113 aa6.2□□□□□ -1.42
USP16-204ENST00000399976 C22orf46C9J442 243 aa6.2□□□□□ -1.42
USP16-204ENST00000399976 C3orf80F5H4A9 247 aa6.2□□□□□ -1.42
USP16-204ENST00000399976 CLDN34H7C241 214 aa6.2□□□□□ -1.42
USP16-204ENST00000399976 F2RL2O00254 374 aa6.2□□□□□ -1.42
USP16-204ENST00000399976 NAPSAO96009 420 aa6.2□□□□□ -1.42
USP16-204ENST00000399976 FAM157CP0CG43 387 aa6.2□□□□□ -1.42
USP16-204ENST00000399976 MSMO1Q15800 293 aa6.2□□□□□ -1.42
USP16-204ENST00000399976 FAM71F2Q6NXP2 309 aa6.2□□□□□ -1.42
USP16-204ENST00000399976 HEPN1Q6WQI6 88 aa6.2□□□□□ -1.42
USP16-204ENST00000399976 GDPD3Q7L5L3 318 aa6.2□□□□□ -1.42
USP16-204ENST00000399976 LDLRAD3Q86YD5 345 aa6.2□□□□□ -1.42
USP16-204ENST00000399976 ZBTB8BQ8NAP8 495 aaPredicted RBP6.2□□□□□ -1.42
USP16-204ENST00000399976 CREB3L1Q96BA8 519 aa6.2□□□□□ -1.42
USP16-204ENST00000399976 WDFY2Q96P53 400 aa6.2□□□□□ -1.42
USP16-204ENST00000399976 BARHL1Q9BZE3 327 aa6.2□□□□□ -1.42
USP16-204ENST00000399976 LPAR2Q9HBW0 351 aa6.2□□□□□ -1.42
USP16-204ENST00000399976 HIF1ANQ9NWT6 349 aa6.2□□□□□ -1.42
USP16-204ENST00000399976 ANAPC10Q9UM13 185 aa6.2□□□□□ -1.42
USP16-204ENST00000399976 A6NIN4 97 aa6.2□□□□□ -1.42
USP16-204ENST00000399976 CDRT1O95170 752 aa6.2□□□□□ -1.42
USP16-204ENST00000399976 HTR3BO95264 441 aa6.2□□□□□ -1.42
USP16-204ENST00000399976 DTYMKP23919 212 aa6.2□□□□□ -1.42
USP16-204ENST00000399976 PTBP1P26599 531 aaKnown RBP eCLIP6.2□□□□□ -1.42
USP16-204ENST00000399976 UBE2E1P51965 193 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms