RNA–Protein interactions for RNA: ENST00000399916.5

RUNX3-203, Transcript of runt related transcription factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RUNX3, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-203ENST00000399916 OR2Y1Q8NGV0 311 aa12.12□□□□□ -0.47
RUNX3-203ENST00000399916 SRD5A3Q9H8P0 318 aa12.12□□□□□ -0.47
RUNX3-203ENST00000399916 CYTL1Q9NRR1 136 aa12.12□□□□□ -0.47
RUNX3-203ENST00000399916 APOBEC3BQ9UH17 382 aaKnown RBP12.12□□□□□ -0.47
RUNX3-203ENST00000399916 CLDN16Q9Y5I7 305 aa12.12□□□□□ -0.47
RUNX3-203ENST00000399916 EDDM13A0A1B0GTR0 161 aa12.12□□□□□ -0.47
RUNX3-203ENST00000399916 CXCL10P02778 98 aa12.12□□□□□ -0.47
RUNX3-203ENST00000399916 GAPDHP04406 335 aaKnown RBP12.12□□□□□ -0.47
RUNX3-203ENST00000399916 METRNLQ641Q3 311 aa12.12□□□□□ -0.47
RUNX3-203ENST00000399916 MED25Q71SY5 747 aa12.12□□□□□ -0.47
RUNX3-203ENST00000399916 NPEPL1Q8NDH3 523 aa12.12□□□□□ -0.47
RUNX3-203ENST00000399916 ACY3Q96HD9 319 aa12.12□□□□□ -0.47
RUNX3-203ENST00000399916 SLC46A1Q96NT5 459 aa12.12□□□□□ -0.47
RUNX3-203ENST00000399916 CHRDL1Q9BU40 450 aa12.12□□□□□ -0.47
RUNX3-203ENST00000399916 GPR84Q9NQS5 396 aa12.12□□□□□ -0.47
RUNX3-203ENST00000399916 FLRT3Q9NZU0 649 aa12.12□□□□□ -0.47
RUNX3-203ENST00000399916 OR1A1Q9P1Q5 309 aa12.12□□□□□ -0.47
RUNX3-203ENST00000399916 PRRT4C9JH25 899 aa12.11□□□□□ -0.47
RUNX3-203ENST00000399916 IFNL4K9M1U5 179 aa12.11□□□□□ -0.47
RUNX3-203ENST00000399916 MALLQ13021 153 aa12.11□□□□□ -0.47
RUNX3-203ENST00000399916 HLA-DRB5Q30154 266 aa12.11□□□□□ -0.47
RUNX3-203ENST00000399916 TMEM176BQ3YBM2 270 aaPredicted RBP12.11□□□□□ -0.47
RUNX3-203ENST00000399916 HIKESHIQ53FT3 197 aa12.11□□□□□ -0.47
RUNX3-203ENST00000399916 C1orf53Q5VUE5 145 aa12.11□□□□□ -0.47
RUNX3-203ENST00000399916 GKN2Q86XP6 184 aa12.11□□□□□ -0.47
RUNX3-203ENST00000399916 RCC1LQ96I51 464 aaKnown RBP12.11□□□□□ -0.47
RUNX3-203ENST00000399916 SLC5A6Q9Y289 635 aa12.11□□□□□ -0.47
RUNX3-203ENST00000399916 A0A1B0GUS0 222 aa12.11□□□□□ -0.47
RUNX3-203ENST00000399916 SERINC4A6NH21 518 aa12.11□□□□□ -0.47
RUNX3-203ENST00000399916 NEURL1O76050 574 aa12.11□□□□□ -0.47
RUNX3-203ENST00000399916 SRP19P09132 144 aaKnown RBP12.11□□□□□ -0.47
RUNX3-203ENST00000399916 OR3A4PP47883 348 aa12.11□□□□□ -0.47
RUNX3-203ENST00000399916 RPS11P62280 158 aaKnown RBP eCLIP12.11□□□□□ -0.47
RUNX3-203ENST00000399916 MESP2Q0VG99 397 aa12.11□□□□□ -0.47
RUNX3-203ENST00000399916 SAMD13Q5VXD3 122 aa12.11□□□□□ -0.47
RUNX3-203ENST00000399916 OTOSQ8NHW6 89 aa12.11□□□□□ -0.47
RUNX3-203ENST00000399916 KISS1RQ969F8 398 aaPredicted RBP12.11□□□□□ -0.47
RUNX3-203ENST00000399916 MRGPRX3Q96LB0 322 aa12.11□□□□□ -0.47
RUNX3-203ENST00000399916 RBM24Q9BX46 236 aaKnown RBP12.11□□□□□ -0.47
RUNX3-203ENST00000399916 HRASLS2Q9NWW9 162 aa12.11□□□□□ -0.47
RUNX3-203ENST00000399916 B3GAT1Q9P2W7 334 aa12.11□□□□□ -0.47
RUNX3-203ENST00000399916 MRPS2Q9Y399 296 aaKnown RBP12.11□□□□□ -0.47
RUNX3-203ENST00000399916 A0A1B0GTI1 187 aa12.11□□□□□ -0.47
RUNX3-203ENST00000399916 A0A1B0GV72 72 aa12.11□□□□□ -0.47
RUNX3-203ENST00000399916 A0A1W2PP55 124 aa12.11□□□□□ -0.47
RUNX3-203ENST00000399916 C2orf72A6NCS6 295 aa12.11□□□□□ -0.47
RUNX3-203ENST00000399916 GPR75O95800 540 aa12.11□□□□□ -0.47
RUNX3-203ENST00000399916 ZXDAP98168 799 aa12.11□□□□□ -0.47
RUNX3-203ENST00000399916 STPG1Q5TH74 334 aa12.11□□□□□ -0.47
RUNX3-203ENST00000399916 CDCP2Q5VXM1 449 aa12.11□□□□□ -0.47
RUNX3-203ENST00000399916 OR4B1Q8NGF8 309 aa12.11□□□□□ -0.47
RUNX3-203ENST00000399916 AMELYQ99218 206 aa12.11□□□□□ -0.47
RUNX3-203ENST00000399916 P4HTMQ9NXG6 502 aa12.11□□□□□ -0.47
RUNX3-203ENST00000399916 SNAI2O43623 268 aa12.1□□□□□ -0.47
RUNX3-203ENST00000399916 EGR3Q06889 387 aa12.1□□□□□ -0.47
RUNX3-203ENST00000399916 DLX2Q07687 328 aaPredicted RBP12.1□□□□□ -0.47
RUNX3-203ENST00000399916 SCGB2A2Q13296 93 aa12.1□□□□□ -0.47
RUNX3-203ENST00000399916 C9orf50Q5SZB4 431 aa12.1□□□□□ -0.47
RUNX3-203ENST00000399916 MRPL54Q6P161 138 aaKnown RBP12.1□□□□□ -0.47
RUNX3-203ENST00000399916 D2HGDHQ8N465 521 aa12.1□□□□□ -0.47
RUNX3-203ENST00000399916 MRPL30Q8TCC3 161 aaKnown RBP12.1□□□□□ -0.47
RUNX3-203ENST00000399916 PLEK2Q9NYT0 353 aa12.1□□□□□ -0.47
RUNX3-203ENST00000399916 MTCH1Q9NZJ7 389 aa12.1□□□□□ -0.47
RUNX3-203ENST00000399916 SIRPB1O00241 398 aa12.1□□□□□ -0.47
RUNX3-203ENST00000399916 IL9P15248 144 aa12.1□□□□□ -0.47
RUNX3-203ENST00000399916 PCK2Q16822 640 aa12.1□□□□□ -0.47
RUNX3-203ENST00000399916 HNRNPA1L2Q32P51 320 aaKnown RBP12.1□□□□□ -0.47
RUNX3-203ENST00000399916 TMEM256Q8N2U0 113 aa12.1□□□□□ -0.47
RUNX3-203ENST00000399916 MBNL1Q9NR56 388 aaKnown RBP12.1□□□□□ -0.47
RUNX3-203ENST00000399916 C4orf51C9J302 202 aa12.1□□□□□ -0.47
RUNX3-203ENST00000399916 F8VVB4 439 aa12.1□□□□□ -0.47
RUNX3-203ENST00000399916 F8VWA3 439 aa12.1□□□□□ -0.47
RUNX3-203ENST00000399916 CHST1O43916 411 aa12.1□□□□□ -0.47
RUNX3-203ENST00000399916 LMX1BO60663 402 aa12.1□□□□□ -0.47
RUNX3-203ENST00000399916 PAGE4O60829 102 aa12.1□□□□□ -0.47
RUNX3-203ENST00000399916 DEDDO75618 318 aa12.1□□□□□ -0.47
RUNX3-203ENST00000399916 GYPAP02724 150 aa12.1□□□□□ -0.47
RUNX3-203ENST00000399916 BCL2P10415 239 aa12.1□□□□□ -0.47
RUNX3-203ENST00000399916 ABHD3Q8WU67 409 aa12.1□□□□□ -0.47
RUNX3-203ENST00000399916 HDHD3Q9BSH5 251 aaPredicted RBP12.1□□□□□ -0.47
RUNX3-203ENST00000399916 PLXNA3P51805 1871 aa12.1□□□□□ -0.47
RUNX3-203ENST00000399916 LRRC3CA6NJW4 275 aa12.1□□□□□ -0.47
RUNX3-203ENST00000399916 HAND1O96004 215 aa12.1□□□□□ -0.47
RUNX3-203ENST00000399916 ARL3P36405 182 aa12.1□□□□□ -0.47
RUNX3-203ENST00000399916 DMBX1Q8NFW5 382 aa12.1□□□□□ -0.47
RUNX3-203ENST00000399916 UBALD1Q8TB05 177 aa12.1□□□□□ -0.47
RUNX3-203ENST00000399916 ZNRF4Q8WWF5 429 aa12.1□□□□□ -0.47
RUNX3-203ENST00000399916 ANKRD9Q96BM1 317 aaPredicted RBP12.1□□□□□ -0.47
RUNX3-203ENST00000399916 MED29Q9NX70 200 aa12.1□□□□□ -0.47
RUNX3-203ENST00000399916 TMEM150CB9EJG8 249 aa12.09□□□□□ -0.47
RUNX3-203ENST00000399916 SEMA4FO95754 770 aa12.09□□□□□ -0.47
RUNX3-203ENST00000399916 HRASP01112 189 aa12.09□□□□□ -0.47
RUNX3-203ENST00000399916 HSPB1P04792 205 aaKnown RBP12.09□□□□□ -0.47
RUNX3-203ENST00000399916 VSIG8P0DPA2 414 aa12.09□□□□□ -0.47
RUNX3-203ENST00000399916 PGCP20142 388 aa12.09□□□□□ -0.47
RUNX3-203ENST00000399916 P2RY2P41231 377 aa12.09□□□□□ -0.47
RUNX3-203ENST00000399916 EFNA3P52797 238 aa12.09□□□□□ -0.47
RUNX3-203ENST00000399916 MLC1Q15049 377 aa12.09□□□□□ -0.47
RUNX3-203ENST00000399916 AARDQ4LEZ3 155 aa12.09□□□□□ -0.47
RUNX3-203ENST00000399916 C1orf194Q5T5A4 169 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms