RNA–Protein interactions for RNA: ENST00000399655.5

CACNA1C-220, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 13,433 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-220ENST00000399655 OR2A4O95047 310 aa7.69□□□□□ -1.18
CACNA1C-220ENST00000399655 TRMT61AQ96FX7 289 aaKnown RBP7.69□□□□□ -1.18
CACNA1C-220ENST00000399655 OR2A7Q96R45 310 aa7.69□□□□□ -1.18
CACNA1C-220ENST00000399655 HSPB9Q9BQS6 159 aa7.69□□□□□ -1.18
CACNA1C-220ENST00000399655 OPN4Q9UHM6 478 aa7.69□□□□□ -1.18
CACNA1C-220ENST00000399655 H3BMM0 161 aa7.69□□□□□ -1.18
CACNA1C-220ENST00000399655 ZNF818PQ6ZRF7 136 aa7.69□□□□□ -1.18
CACNA1C-220ENST00000399655 PTOV1Q86YD1 416 aa7.69□□□□□ -1.18
CACNA1C-220ENST00000399655 LINC00052Q96N35 136 aa7.69□□□□□ -1.18
CACNA1C-220ENST00000399655 FKBP1AP62942 108 aaKnown RBP7.69□□□□□ -1.18
CACNA1C-220ENST00000399655 SEC11AP67812 179 aa7.69□□□□□ -1.18
CACNA1C-220ENST00000399655 CCDC144NLQ6NUI1 221 aa7.69□□□□□ -1.18
CACNA1C-220ENST00000399655 OSR2Q8N2R0 312 aa7.69□□□□□ -1.18
CACNA1C-220ENST00000399655 GPR82Q96P67 336 aa7.69□□□□□ -1.18
CACNA1C-220ENST00000399655 KLK11Q9UBX7 282 aa7.69□□□□□ -1.18
CACNA1C-220ENST00000399655 F11RQ9Y624 299 aaKnown RBP7.69□□□□□ -1.18
CACNA1C-220ENST00000399655 MALRD1Q5VYJ5 2156 aa7.69□□□□□ -1.18
CACNA1C-220ENST00000399655 CLEC20AQ6ZU45 233 aa7.69□□□□□ -1.18
CACNA1C-220ENST00000399655 HDHD3Q9BSH5 251 aaPredicted RBP7.69□□□□□ -1.18
CACNA1C-220ENST00000399655 A8MWV9 139 aa7.69□□□□□ -1.18
CACNA1C-220ENST00000399655 C1orf105O95561 183 aa7.69□□□□□ -1.18
CACNA1C-220ENST00000399655 CELF2-AS1Q8N7Q2 184 aa7.69□□□□□ -1.18
CACNA1C-220ENST00000399655 SMIM19Q96E16 107 aa7.69□□□□□ -1.18
CACNA1C-220ENST00000399655 TNFSF18Q9UNG2 199 aa7.69□□□□□ -1.18
CACNA1C-220ENST00000399655 F13BP05160 661 aa7.69□□□□□ -1.18
CACNA1C-220ENST00000399655 OR4D11Q8NGI4 311 aa7.69□□□□□ -1.18
CACNA1C-220ENST00000399655 A0A0G2JLW4 131 aa7.68□□□□□ -1.18
CACNA1C-220ENST00000399655 LRRC75AQ8NAA5 344 aa7.68□□□□□ -1.18
CACNA1C-220ENST00000399655 LINC01387J3KSC0 135 aa7.68□□□□□ -1.18
CACNA1C-220ENST00000399655 SDHDO14521 159 aa7.68□□□□□ -1.18
CACNA1C-220ENST00000399655 OR52E5Q8NH55 327 aa7.68□□□□□ -1.18
CACNA1C-220ENST00000399655 NEIL2Q969S2 332 aa7.68□□□□□ -1.18
CACNA1C-220ENST00000399655 ZBP1Q9H171 429 aa7.68□□□□□ -1.18
CACNA1C-220ENST00000399655 PBRM1Q86U86 1689 aa7.68□□□□□ -1.18
CACNA1C-220ENST00000399655 YJEFN3A6XGL0 299 aa7.68□□□□□ -1.18
CACNA1C-220ENST00000399655 TREML2Q5T2D2 321 aa7.68□□□□□ -1.18
CACNA1C-220ENST00000399655 ASB10Q8WXI3 467 aa7.68□□□□□ -1.18
CACNA1C-220ENST00000399655 RPRMQ9NS64 109 aa7.68□□□□□ -1.18
CACNA1C-220ENST00000399655 DMRT1Q9Y5R6 373 aa7.68□□□□□ -1.18
CACNA1C-220ENST00000399655 hADV38S2A0JD32 116 aa7.68□□□□□ -1.18
CACNA1C-220ENST00000399655 CFDP00746 253 aaPredicted RBP7.68□□□□□ -1.18
CACNA1C-220ENST00000399655 UNGP13051 313 aaPredicted RBP7.68□□□□□ -1.18
CACNA1C-220ENST00000399655 SMPD1P17405 629 aa7.68□□□□□ -1.18
CACNA1C-220ENST00000399655 SRD5A2P31213 254 aa7.68□□□□□ -1.18
CACNA1C-220ENST00000399655 MFAP2P55001 183 aa7.68□□□□□ -1.18
CACNA1C-220ENST00000399655 CPEB1Q9BZB8 566 aaKnown RBP7.68□□□□□ -1.18
CACNA1C-220ENST00000399655 GHITMQ9H3K2 345 aa7.68□□□□□ -1.18
CACNA1C-220ENST00000399655 CST9LQ9H4G1 147 aa7.68□□□□□ -1.18
CACNA1C-220ENST00000399655 GSG1Q2KHT4 349 aa7.68□□□□□ -1.18
CACNA1C-220ENST00000399655 TCEAL8Q8IYN2 117 aa7.68□□□□□ -1.18
CACNA1C-220ENST00000399655 NWD1Q149M9 1564 aa7.68□□□□□ -1.18
CACNA1C-220ENST00000399655 TMEM229BQ8NBD8 167 aa7.68□□□□□ -1.18
CACNA1C-220ENST00000399655 PDZD7Q9H5P4 517 aa7.68□□□□□ -1.18
CACNA1C-220ENST00000399655 ZNF774Q6NX45 483 aa7.68□□□□□ -1.18
CACNA1C-220ENST00000399655 TMEM56-RWDD3S4R434 201 aa7.68□□□□□ -1.18
CACNA1C-220ENST00000399655 CLTCL1P53675 1640 aa7.68□□□□□ -1.18
CACNA1C-220ENST00000399655 C7orf71A4D174 169 aa7.68□□□□□ -1.18
CACNA1C-220ENST00000399655 CST7O76096 145 aa7.68□□□□□ -1.18
CACNA1C-220ENST00000399655 DTX1Q86Y01 620 aa7.68□□□□□ -1.18
CACNA1C-220ENST00000399655 PBOV1Q9GZY1 135 aa7.68□□□□□ -1.18
CACNA1C-220ENST00000399655 ASPDHA6ND91 283 aa7.68□□□□□ -1.18
CACNA1C-220ENST00000399655 RABAC1Q9UI14 185 aa7.68□□□□□ -1.18
CACNA1C-220ENST00000399655 PSORS1C1Q9UIG5 152 aa7.68□□□□□ -1.18
CACNA1C-220ENST00000399655 A0A1W2PP55 124 aa7.68□□□□□ -1.18
CACNA1C-220ENST00000399655 SERINC4A6NH21 518 aa7.68□□□□□ -1.18
CACNA1C-220ENST00000399655 NTN1O95631 604 aa7.68□□□□□ -1.18
CACNA1C-220ENST00000399655 FMODQ06828 376 aa7.68□□□□□ -1.18
CACNA1C-220ENST00000399655 SELENOHQ8IZQ5 122 aaKnown RBP7.68□□□□□ -1.18
CACNA1C-220ENST00000399655 BHLHE23Q8NDY6 225 aa7.68□□□□□ -1.18
CACNA1C-220ENST00000399655 APOBEC3DQ96AK3 386 aaPredicted RBP7.68□□□□□ -1.18
CACNA1C-220ENST00000399655 ST6GALNAC4Q9H4F1 302 aa7.68□□□□□ -1.18
CACNA1C-220ENST00000399655 GPR75O95800 540 aa7.67□□□□□ -1.18
CACNA1C-220ENST00000399655 HMGN2P05204 90 aaKnown RBP7.67□□□□□ -1.18
CACNA1C-220ENST00000399655 SARAFQ96BY9 339 aa7.67□□□□□ -1.18
CACNA1C-220ENST00000399655 GPR146Q96CH1 333 aa7.67□□□□□ -1.18
CACNA1C-220ENST00000399655 SPATA25Q9BR10 227 aa7.67□□□□□ -1.18
CACNA1C-220ENST00000399655 A4GNTQ9UNA3 340 aa7.67□□□□□ -1.18
CACNA1C-220ENST00000399655 GABRA1P14867 456 aa7.67□□□□□ -1.18
CACNA1C-220ENST00000399655 LRTM2Q8N967 370 aa7.67□□□□□ -1.18
CACNA1C-220ENST00000399655 EML6Q6ZMW3 1958 aa7.67□□□□□ -1.18
CACNA1C-220ENST00000399655 ARNTLO00327 626 aa7.67□□□□□ -1.18
CACNA1C-220ENST00000399655 ITGB1BP1O14713 200 aa7.67□□□□□ -1.18
CACNA1C-220ENST00000399655 C9orf135Q5VTT2 229 aa7.67□□□□□ -1.18
CACNA1C-220ENST00000399655 VGLL1Q99990 258 aa7.67□□□□□ -1.18
CACNA1C-220ENST00000399655 CYBAP13498 195 aa7.67□□□□□ -1.18
CACNA1C-220ENST00000399655 GALNSP34059 522 aa7.67□□□□□ -1.18
CACNA1C-220ENST00000399655 PSG9Q00887 426 aa7.67□□□□□ -1.18
CACNA1C-220ENST00000399655 PSG5Q15238 335 aa7.67□□□□□ -1.18
CACNA1C-220ENST00000399655 SUSD3Q96L08 255 aa7.67□□□□□ -1.18
CACNA1C-220ENST00000399655 LINC01549A6NIU2 74 aa7.67□□□□□ -1.18
CACNA1C-220ENST00000399655 SIGLEC5O15389 551 aa7.67□□□□□ -1.18
CACNA1C-220ENST00000399655 MPV17LQ2QL34 196 aa7.67□□□□□ -1.18
CACNA1C-220ENST00000399655 LINC01559Q495D7 138 aa7.67□□□□□ -1.18
CACNA1C-220ENST00000399655 MRPL55Q7Z7F7 128 aaKnown RBP7.67□□□□□ -1.18
CACNA1C-220ENST00000399655 APIPQ96GX9 242 aa7.67□□□□□ -1.18
CACNA1C-220ENST00000399655 C20orf141Q9NUB4 165 aa7.67□□□□□ -1.18
CACNA1C-220ENST00000399655 KLF12Q9Y4X4 402 aa7.67□□□□□ -1.18
CACNA1C-220ENST00000399655 TRAV8-1A0A0A6YYK1 113 aa7.67□□□□□ -1.18
CACNA1C-220ENST00000399655 K7ERS5 55 aa7.67□□□□□ -1.18
CACNA1C-220ENST00000399655 ACSF3Q4G176 576 aaPredicted RBP7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms