RNA–Protein interactions for RNA: ENST00000397066.8

CCNF-202, Transcript of cyclin F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCNF, Length 4,283 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-202ENST00000397066 EDARADDQ8WWZ3 215 aa12.76□□□□□ -0.37
CCNF-202ENST00000397066 MALSU1Q96EH3 234 aa12.76□□□□□ -0.37
CCNF-202ENST00000397066 ZNF32P17041 273 aa12.76□□□□□ -0.37
CCNF-202ENST00000397066 PTGDSP41222 190 aa12.76□□□□□ -0.37
CCNF-202ENST00000397066 C17orf78Q8N4C9 275 aa12.76□□□□□ -0.37
CCNF-202ENST00000397066 MUCL1Q96DR8 90 aa12.76□□□□□ -0.37
CCNF-202ENST00000397066 SMDT1Q9H4I9 107 aa12.76□□□□□ -0.37
CCNF-202ENST00000397066 LRP4O75096 1905 aa12.76□□□□□ -0.37
CCNF-202ENST00000397066 PITX3O75364 302 aa12.76□□□□□ -0.37
CCNF-202ENST00000397066 TRAPPC6AO75865 159 aa12.76□□□□□ -0.37
CCNF-202ENST00000397066 ZNF16P17020 682 aaPredicted RBP12.76□□□□□ -0.37
CCNF-202ENST00000397066 MRPS34P82930 218 aaKnown RBP12.76□□□□□ -0.37
CCNF-202ENST00000397066 HIST3H3Q16695 136 aa12.76□□□□□ -0.37
CCNF-202ENST00000397066 GPR61Q9BZJ8 451 aa12.76□□□□□ -0.37
CCNF-202ENST00000397066 OPA3Q9H6K4 179 aa12.76□□□□□ -0.37
CCNF-202ENST00000397066 IGKV1-27A0A075B6S5 117 aa12.76□□□□□ -0.37
CCNF-202ENST00000397066 SEC14L6B5MCN3 397 aa12.76□□□□□ -0.37
CCNF-202ENST00000397066 CHST1O43916 411 aa12.76□□□□□ -0.37
CCNF-202ENST00000397066 SCAF4O95104 1147 aaKnown RBP12.76□□□□□ -0.37
CCNF-202ENST00000397066 IGFBP4P22692 258 aa12.76□□□□□ -0.37
CCNF-202ENST00000397066 FUT6P51993 359 aa12.76□□□□□ -0.37
CCNF-202ENST00000397066 C1orf87Q8N0U7 546 aa12.76□□□□□ -0.37
CCNF-202ENST00000397066 EXTL1Q92935 676 aa12.76□□□□□ -0.37
CCNF-202ENST00000397066 RHOVQ96L33 236 aa12.76□□□□□ -0.37
CCNF-202ENST00000397066 TMEM222Q9H0R3 208 aa12.76□□□□□ -0.37
CCNF-202ENST00000397066 SERPINE2P07093 398 aa12.75□□□□□ -0.37
CCNF-202ENST00000397066 CELA2AP08217 269 aa12.75□□□□□ -0.37
CCNF-202ENST00000397066 HNF4GQ14541 408 aa12.75□□□□□ -0.37
CCNF-202ENST00000397066 SSX9Q7RTT3 188 aa12.75□□□□□ -0.37
CCNF-202ENST00000397066 AAED1Q7RTV5 226 aa12.75□□□□□ -0.37
CCNF-202ENST00000397066 ZNF100Q8IYN0 542 aa12.75□□□□□ -0.37
CCNF-202ENST00000397066 GAPTQ8N292 157 aa12.75□□□□□ -0.37
CCNF-202ENST00000397066 NAT6Q93015 286 aa12.75□□□□□ -0.37
CCNF-202ENST00000397066 PRO1933Q9H354 126 aa12.75□□□□□ -0.37
CCNF-202ENST00000397066 BCAT2O15382 392 aaPredicted RBP12.75□□□□□ -0.37
CCNF-202ENST00000397066 SLC34A2O95436 690 aa12.75□□□□□ -0.37
CCNF-202ENST00000397066 SRP19P09132 144 aaKnown RBP12.75□□□□□ -0.37
CCNF-202ENST00000397066 PYY3Q5JQD4 70 aa12.75□□□□□ -0.37
CCNF-202ENST00000397066 OR51H1Q8NH63 302 aa12.75□□□□□ -0.37
CCNF-202ENST00000397066 IGHV3-9P01782 118 aa12.75□□□□□ -0.37
CCNF-202ENST00000397066 HLA-DRB3P79483 266 aa12.75□□□□□ -0.37
CCNF-202ENST00000397066 FAM185AQ8N0U4 392 aa12.75□□□□□ -0.37
CCNF-202ENST00000397066 SLC25A45Q8N413 288 aa12.75□□□□□ -0.37
CCNF-202ENST00000397066 ZNF611Q8N823 705 aa12.75□□□□□ -0.37
CCNF-202ENST00000397066 FAM210BQ96KR6 192 aa12.75□□□□□ -0.37
CCNF-202ENST00000397066 SHANK1Q9Y566 2161 aa12.75□□□□□ -0.37
CCNF-202ENST00000397066 TSTD3H0UI37 97 aa12.74□□□□□ -0.37
CCNF-202ENST00000397066 F10P00742 488 aa12.74□□□□□ -0.37
CCNF-202ENST00000397066 CXCL1P09341 107 aa12.74□□□□□ -0.37
CCNF-202ENST00000397066 CD200P41217 278 aa12.74□□□□□ -0.37
CCNF-202ENST00000397066 C10orf128Q5T292 105 aa12.74□□□□□ -0.37
CCNF-202ENST00000397066 CRIP3Q6Q6R5 217 aa12.74□□□□□ -0.37
CCNF-202ENST00000397066 LRTM2Q8N967 370 aa12.74□□□□□ -0.37
CCNF-202ENST00000397066 CPAMD8Q8IZJ3 1885 aa12.74□□□□□ -0.37
CCNF-202ENST00000397066 LOC102725191A0A1B0GVB3 256 aa12.74□□□□□ -0.37
CCNF-202ENST00000397066 ZNF729A6NN14 1252 aaPredicted RBP12.74□□□□□ -0.37
CCNF-202ENST00000397066 HAAOP46952 286 aa12.74□□□□□ -0.37
CCNF-202ENST00000397066 USF2Q15853 346 aaPredicted RBP12.74□□□□□ -0.37
CCNF-202ENST00000397066 HIST2H3PS2Q5TEC6 136 aa12.74□□□□□ -0.37
CCNF-202ENST00000397066 WDR74Q6RFH5 385 aaPredicted RBP12.74□□□□□ -0.37
CCNF-202ENST00000397066 SPNS3Q6ZMD2 512 aa12.74□□□□□ -0.37
CCNF-202ENST00000397066 YRDCQ86U90 279 aaKnown RBP12.74□□□□□ -0.37
CCNF-202ENST00000397066 RBMXL1Q96E39 390 aaKnown RBP12.74□□□□□ -0.37
CCNF-202ENST00000397066 TREM2Q9NZC2 230 aa12.74□□□□□ -0.37
CCNF-202ENST00000397066 UCP2P55851 309 aa12.74□□□□□ -0.37
CCNF-202ENST00000397066 TMEM267Q0VDI3 215 aaPredicted RBP12.74□□□□□ -0.37
CCNF-202ENST00000397066 ELOBQ15370 118 aa12.74□□□□□ -0.37
CCNF-202ENST00000397066 RSPO1Q2MKA7 263 aaPredicted RBP12.74□□□□□ -0.37
CCNF-202ENST00000397066 FAM27BQ5VT28 67 aa12.74□□□□□ -0.37
CCNF-202ENST00000397066 C9orf135Q5VTT2 229 aa12.74□□□□□ -0.37
CCNF-202ENST00000397066 C1QL4Q86Z23 238 aa12.74□□□□□ -0.37
CCNF-202ENST00000397066 OR4D5Q8NGN0 318 aa12.74□□□□□ -0.37
CCNF-202ENST00000397066 LYRM2Q9NU23 88 aaPredicted RBP12.74□□□□□ -0.37
CCNF-202ENST00000397066 NCOA6Q14686 2063 aaPredicted RBP12.74□□□□□ -0.37
CCNF-202ENST00000397066 SMCO3A2RU48 225 aa12.74□□□□□ -0.37
CCNF-202ENST00000397066 SHISA7A6NL88 538 aa12.74□□□□□ -0.37
CCNF-202ENST00000397066 MPV17LQ2QL34 196 aa12.74□□□□□ -0.37
CCNF-202ENST00000397066 IL1F10Q8WWZ1 152 aa12.74□□□□□ -0.37
CCNF-202ENST00000397066 TMEM54Q969K7 222 aa12.74□□□□□ -0.37
CCNF-202ENST00000397066 NABP1Q96AH0 204 aa12.74□□□□□ -0.37
CCNF-202ENST00000397066 SCRT1Q9BWW7 348 aa12.74□□□□□ -0.37
CCNF-202ENST00000397066 UFSP2Q9NUQ7 469 aa12.74□□□□□ -0.37
CCNF-202ENST00000397066 COL4A2P08572 1712 aa12.74□□□□□ -0.37
CCNF-202ENST00000397066 IGKV1-12A0A0C4DH73 117 aa12.73□□□□□ -0.37
CCNF-202ENST00000397066 IGKV1D-12P01611 117 aa12.73□□□□□ -0.37
CCNF-202ENST00000397066 C5orf24Q7Z6I8 188 aa12.73□□□□□ -0.37
CCNF-202ENST00000397066 DECR2Q9NUI1 292 aa12.73□□□□□ -0.37
CCNF-202ENST00000397066 PTRH2Q9Y3E5 179 aaKnown RBP12.73□□□□□ -0.37
CCNF-202ENST00000397066 CCL3P10147 92 aa12.73□□□□□ -0.37
CCNF-202ENST00000397066 CARD18P57730 90 aa12.73□□□□□ -0.37
CCNF-202ENST00000397066 TMEM211Q6ICI0 200 aa12.73□□□□□ -0.37
CCNF-202ENST00000397066 LILRB2Q8N423 598 aa12.73□□□□□ -0.37
CCNF-202ENST00000397066 HPSE2Q8WWQ2 592 aa12.73□□□□□ -0.37
CCNF-202ENST00000397066 HIST1H2AAQ96QV6 131 aa12.73□□□□□ -0.37
CCNF-202ENST00000397066 WNT16Q9UBV4 365 aa12.73□□□□□ -0.37
CCNF-202ENST00000397066 A0A087WZY1 265 aa12.73□□□□□ -0.37
CCNF-202ENST00000397066 ZNHIT1O43257 154 aa12.73□□□□□ -0.37
CCNF-202ENST00000397066 FGF8P55075 233 aaPredicted RBP12.73□□□□□ -0.37
CCNF-202ENST00000397066 RBM11P57052 281 aaKnown RBP12.73□□□□□ -0.37
CCNF-202ENST00000397066 GFI1BQ5VTD9 330 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms