RNA–Protein interactions for RNA: ENST00000379996.7

CDKL5-202, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-202ENST00000379996 RND1Q92730 232 aa6.61□□□□□ -1.35
CDKL5-202ENST00000379996 MARC2Q969Z3 335 aa6.61□□□□□ -1.35
CDKL5-202ENST00000379996 RCC1LQ96I51 464 aaKnown RBP6.61□□□□□ -1.35
CDKL5-202ENST00000379996 NKX6-2Q9C056 277 aaPredicted RBP6.61□□□□□ -1.35
CDKL5-202ENST00000379996 DNAJB11Q9UBS4 358 aa6.61□□□□□ -1.35
CDKL5-202ENST00000379996 IGF2RP11717 2491 aa6.61□□□□□ -1.35
CDKL5-202ENST00000379996 A8MXE2 369 aa6.61□□□□□ -1.35
CDKL5-202ENST00000379996 NUDT19A8MXV4 375 aa6.61□□□□□ -1.35
CDKL5-202ENST00000379996 HKR1P10072 659 aa6.61□□□□□ -1.35
CDKL5-202ENST00000379996 IGHV1-2P23083 117 aa6.61□□□□□ -1.35
CDKL5-202ENST00000379996 ACKR3P25106 362 aa6.61□□□□□ -1.35
CDKL5-202ENST00000379996 HOXC12P31275 282 aa6.61□□□□□ -1.35
CDKL5-202ENST00000379996 NPY4RP50391 375 aa6.61□□□□□ -1.35
CDKL5-202ENST00000379996 PRKXP51817 358 aa6.61□□□□□ -1.35
CDKL5-202ENST00000379996 CEACAM16Q2WEN9 425 aa6.61□□□□□ -1.35
CDKL5-202ENST00000379996 LRRC37A5PQ49AS3 106 aa6.61□□□□□ -1.35
CDKL5-202ENST00000379996 LCE2CQ5TA81 110 aa6.61□□□□□ -1.35
CDKL5-202ENST00000379996 FAM57BQ71RH2 274 aa6.61□□□□□ -1.35
CDKL5-202ENST00000379996 TMEM17Q86X19 198 aa6.61□□□□□ -1.35
CDKL5-202ENST00000379996 ZNF808Q8N4W9 903 aaPredicted RBP6.61□□□□□ -1.35
CDKL5-202ENST00000379996 OR10A2Q9H208 303 aa6.61□□□□□ -1.35
CDKL5-202ENST00000379996 PRSS50Q9UI38 385 aa6.61□□□□□ -1.35
CDKL5-202ENST00000379996 AMDHD2Q9Y303 409 aa6.61□□□□□ -1.35
CDKL5-202ENST00000379996 OR6C6A6NF89 314 aa6.6□□□□□ -1.35
CDKL5-202ENST00000379996 CRYM-AS1A6NIL9 109 aa6.6□□□□□ -1.35
CDKL5-202ENST00000379996 SERPINE3A8MV23 424 aa6.6□□□□□ -1.35
CDKL5-202ENST00000379996 CD5P06127 495 aa6.6□□□□□ -1.35
CDKL5-202ENST00000379996 HEXAP06865 529 aa6.6□□□□□ -1.35
CDKL5-202ENST00000379996 ZNF20P17024 532 aa6.6□□□□□ -1.35
CDKL5-202ENST00000379996 AKR1C4P17516 323 aa6.6□□□□□ -1.35
CDKL5-202ENST00000379996 ARR3P36575 388 aa6.6□□□□□ -1.35
CDKL5-202ENST00000379996 TGFBR3Q03167 851 aa6.6□□□□□ -1.35
CDKL5-202ENST00000379996 RAB35Q15286 201 aa6.6□□□□□ -1.35
CDKL5-202ENST00000379996 GABRA6Q16445 453 aa6.6□□□□□ -1.35
CDKL5-202ENST00000379996 GUCA2BQ16661 112 aa6.6□□□□□ -1.35
CDKL5-202ENST00000379996 VWA1Q6PCB0 445 aa6.6□□□□□ -1.35
CDKL5-202ENST00000379996 BTNL8Q6UX41 500 aa6.6□□□□□ -1.35
CDKL5-202ENST00000379996 CCDC54Q8NEL0 328 aa6.6□□□□□ -1.35
CDKL5-202ENST00000379996 GJC3Q8NFK1 279 aa6.6□□□□□ -1.35
CDKL5-202ENST00000379996 MEGF10Q96KG7 1140 aa6.6□□□□□ -1.35
CDKL5-202ENST00000379996 MMP26Q9NRE1 261 aa6.6□□□□□ -1.35
CDKL5-202ENST00000379996 TINAGQ9UJW2 476 aa6.6□□□□□ -1.35
CDKL5-202ENST00000379996 ZDHHC8Q9ULC8 765 aa6.6□□□□□ -1.35
CDKL5-202ENST00000379996 CELSR3Q9NYQ7 3312 aa6.6□□□□□ -1.35
CDKL5-202ENST00000379996 LOC100509620A0A075B734 347 aa6.6□□□□□ -1.35
CDKL5-202ENST00000379996 MPIG6BO95866 241 aa6.6□□□□□ -1.35
CDKL5-202ENST00000379996 FCGR3AP08637 254 aa6.6□□□□□ -1.35
CDKL5-202ENST00000379996 CHRNB4P30926 498 aa6.6□□□□□ -1.35
CDKL5-202ENST00000379996 SCRN3Q0VDG4 424 aa6.6□□□□□ -1.35
CDKL5-202ENST00000379996 RBM39Q14498 530 aaKnown RBP6.6□□□□□ -1.35
CDKL5-202ENST00000379996 CARD17Q5XLA6 110 aa6.6□□□□□ -1.35
CDKL5-202ENST00000379996 DHRS11Q6UWP2 260 aa6.6□□□□□ -1.35
CDKL5-202ENST00000379996 UNQ6126/PRO20091Q6UXV3 157 aa6.6□□□□□ -1.35
CDKL5-202ENST00000379996 BAP18Q8IXM2 172 aa6.6□□□□□ -1.35
CDKL5-202ENST00000379996 RPRMLQ8N4K4 120 aa6.6□□□□□ -1.35
CDKL5-202ENST00000379996 LRTM2Q8N967 370 aa6.6□□□□□ -1.35
CDKL5-202ENST00000379996 CHST4Q8NCG5 386 aa6.6□□□□□ -1.35
CDKL5-202ENST00000379996 PP6455Q8WZ26 134 aa6.6□□□□□ -1.35
CDKL5-202ENST00000379996 EMG1Q92979 244 aaKnown RBP6.6□□□□□ -1.35
CDKL5-202ENST00000379996 BBC3Q96PG8 261 aaPredicted RBP6.6□□□□□ -1.35
CDKL5-202ENST00000379996 LPAR3Q9UBY5 353 aa6.6□□□□□ -1.35
CDKL5-202ENST00000379996 HSF4Q9ULV5 492 aa6.6□□□□□ -1.35
CDKL5-202ENST00000379996 GPR31O00270 319 aa6.6□□□□□ -1.35
CDKL5-202ENST00000379996 TSPAN4O14817 238 aa6.6□□□□□ -1.35
CDKL5-202ENST00000379996 FARS2O95363 451 aaKnown RBP6.6□□□□□ -1.35
CDKL5-202ENST00000379996 GLRA1P23415 457 aa6.6□□□□□ -1.35
CDKL5-202ENST00000379996 ASCL1P50553 236 aa6.6□□□□□ -1.35
CDKL5-202ENST00000379996 PLXDC2Q6UX71 529 aa6.6□□□□□ -1.35
CDKL5-202ENST00000379996 IL34Q6ZMJ4 242 aa6.6□□□□□ -1.35
CDKL5-202ENST00000379996 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.6□□□□□ -1.35
CDKL5-202ENST00000379996 Q8NFD4 153 aa6.6□□□□□ -1.35
CDKL5-202ENST00000379996 OR2AJ1Q8NGZ0 328 aa6.6□□□□□ -1.35
CDKL5-202ENST00000379996 SGK3Q96BR1 496 aa6.6□□□□□ -1.35
CDKL5-202ENST00000379996 FAM71F1Q96KD3 344 aaPredicted RBP6.6□□□□□ -1.35
CDKL5-202ENST00000379996 C2orf50Q96LR7 162 aa6.6□□□□□ -1.35
CDKL5-202ENST00000379996 ALKBH3Q96Q83 286 aaPredicted RBP6.6□□□□□ -1.35
CDKL5-202ENST00000379996 ZNF471Q9BX82 626 aaPredicted RBP6.6□□□□□ -1.35
CDKL5-202ENST00000379996 TIMM10BQ9Y5J6 103 aa6.6□□□□□ -1.35
CDKL5-202ENST00000379996 EEF1E1-BLOC1S5C9J1V9 151 aa6.59□□□□□ -1.35
CDKL5-202ENST00000379996 DEDDO75618 318 aa6.59□□□□□ -1.35
CDKL5-202ENST00000379996 IGLV1-44P01699 117 aa6.59□□□□□ -1.35
CDKL5-202ENST00000379996 PAX6P26367 422 aa6.59□□□□□ -1.35
CDKL5-202ENST00000379996 GUCA1AP43080 201 aaPredicted RBP6.59□□□□□ -1.35
CDKL5-202ENST00000379996 TAS2R46P59540 309 aa6.59□□□□□ -1.35
CDKL5-202ENST00000379996 ARF1P84077 181 aaKnown RBP6.59□□□□□ -1.35
CDKL5-202ENST00000379996 ADORA2A-AS1P86434 159 aa6.59□□□□□ -1.35
CDKL5-202ENST00000379996 CYCSP99999 105 aaKnown RBP6.59□□□□□ -1.35
CDKL5-202ENST00000379996 RAB32Q13637 225 aa6.59□□□□□ -1.35
CDKL5-202ENST00000379996 TIMM23BQ5SRD1 257 aa6.59□□□□□ -1.35
CDKL5-202ENST00000379996 ZNF474Q6S9Z5 364 aaPredicted RBP6.59□□□□□ -1.35
CDKL5-202ENST00000379996 C1orf174Q8IYL3 243 aa6.59□□□□□ -1.35
CDKL5-202ENST00000379996 THAP6Q8TBB0 222 aa6.59□□□□□ -1.35
CDKL5-202ENST00000379996 DCUN1D4Q92564 292 aa6.59□□□□□ -1.35
CDKL5-202ENST00000379996 MARS2Q96GW9 593 aaKnown RBP6.59□□□□□ -1.35
CDKL5-202ENST00000379996 IL36GQ9NZH8 169 aa6.59□□□□□ -1.35
CDKL5-202ENST00000379996 COMMD9Q9P000 198 aa6.59□□□□□ -1.35
CDKL5-202ENST00000379996 USP24Q9UPU5 2620 aa6.59□□□□□ -1.35
CDKL5-202ENST00000379996 ZNF407Q9C0G0 2248 aa6.59□□□□□ -1.35
CDKL5-202ENST00000379996 ATMQ13315 3056 aa6.59□□□□□ -1.35
CDKL5-202ENST00000379996 IGKV1-12A0A0C4DH73 117 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms