RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 RGS7BPQ6MZT1 257 aaPredicted RBP7.47□□□□□ -1.21
SNRNP40-202ENST00000373720 MDP1Q86V88 176 aa7.47□□□□□ -1.21
SNRNP40-202ENST00000373720 CALHM1Q8IU99 346 aa7.47□□□□□ -1.21
SNRNP40-202ENST00000373720 BAP18Q8IXM2 172 aa7.47□□□□□ -1.21
SNRNP40-202ENST00000373720 ZNF565Q8N9K5 539 aa7.47□□□□□ -1.21
SNRNP40-202ENST00000373720 CLEC18CQ8NCF0 446 aa7.47□□□□□ -1.21
SNRNP40-202ENST00000373720 ADAD2Q8NCV1 583 aaKnown RBP7.47□□□□□ -1.21
SNRNP40-202ENST00000373720 OR10K1Q8NGX5 313 aa7.47□□□□□ -1.21
SNRNP40-202ENST00000373720 CASTOR1Q8WTX7 329 aa7.47□□□□□ -1.21
SNRNP40-202ENST00000373720 TMEM56Q96MV1 263 aa7.47□□□□□ -1.21
SNRNP40-202ENST00000373720 CNTNAP3BQ96NU0 1288 aa7.47□□□□□ -1.21
SNRNP40-202ENST00000373720 SULT4A1Q9BR01 284 aa7.47□□□□□ -1.21
SNRNP40-202ENST00000373720 SFXN3Q9BWM7 321 aa7.47□□□□□ -1.21
SNRNP40-202ENST00000373720 CNTNAP3Q9BZ76 1288 aa7.47□□□□□ -1.21
SNRNP40-202ENST00000373720 TLNRD1Q9H1K6 362 aa7.47□□□□□ -1.21
SNRNP40-202ENST00000373720 PIGMQ9H3S5 423 aa7.47□□□□□ -1.21
SNRNP40-202ENST00000373720 NCOR1P1Q9H4R4 102 aa7.47□□□□□ -1.21
SNRNP40-202ENST00000373720 FN3KRPQ9HA64 309 aa7.47□□□□□ -1.21
SNRNP40-202ENST00000373720 RDH8Q9NYR8 311 aa7.47□□□□□ -1.21
SNRNP40-202ENST00000373720 PROCRQ9UNN8 238 aa7.47□□□□□ -1.21
SNRNP40-202ENST00000373720 POMT1Q9Y6A1 747 aa7.47□□□□□ -1.21
SNRNP40-202ENST00000373720 TMEM56-RWDD3S4R434 201 aa7.47□□□□□ -1.21
SNRNP40-202ENST00000373720 KNTC1P50748 2209 aa7.47□□□□□ -1.21
SNRNP40-202ENST00000373720 C13orf42A0A1B0GVH6 325 aa7.46□□□□□ -1.22
SNRNP40-202ENST00000373720 SPAARA0A1B0GVQ0 90 aa7.46□□□□□ -1.22
SNRNP40-202ENST00000373720 hCG_1807616A0A1W2PRN6 198 aa7.46□□□□□ -1.22
SNRNP40-202ENST00000373720 RNF212BA8MTL3 300 aa7.46□□□□□ -1.22
SNRNP40-202ENST00000373720 FAM25EA8MYX2 175 aa7.46□□□□□ -1.22
SNRNP40-202ENST00000373720 F5H0A9 414 aaPredicted RBP7.46□□□□□ -1.22
SNRNP40-202ENST00000373720 MKRN2OSH3BPM6 223 aa7.46□□□□□ -1.22
SNRNP40-202ENST00000373720 ERVH48-1M5A8F1 160 aa7.46□□□□□ -1.22
SNRNP40-202ENST00000373720 GPR31O00270 319 aa7.46□□□□□ -1.22
SNRNP40-202ENST00000373720 SMPD2O60906 423 aa7.46□□□□□ -1.22
SNRNP40-202ENST00000373720 SIX6O95475 246 aa7.46□□□□□ -1.22
SNRNP40-202ENST00000373720 PPYP01298 95 aa7.46□□□□□ -1.22
SNRNP40-202ENST00000373720 IGLV1-44P01699 117 aa7.46□□□□□ -1.22
SNRNP40-202ENST00000373720 IGHV3-9P01782 118 aa7.46□□□□□ -1.22
SNRNP40-202ENST00000373720 GLRA1P23415 457 aa7.46□□□□□ -1.22
SNRNP40-202ENST00000373720 FCGR2CP31995 323 aa7.46□□□□□ -1.22
SNRNP40-202ENST00000373720 RFC3P40938 356 aa7.46□□□□□ -1.22
SNRNP40-202ENST00000373720 P2RY1P47900 373 aa7.46□□□□□ -1.22
SNRNP40-202ENST00000373720 GPM6AP51674 278 aa7.46□□□□□ -1.22
SNRNP40-202ENST00000373720 ARHGDIBP52566 201 aa7.46□□□□□ -1.22
SNRNP40-202ENST00000373720 P2RX3P56373 397 aa7.46□□□□□ -1.22
SNRNP40-202ENST00000373720 PIGPP57054 158 aa7.46□□□□□ -1.22
SNRNP40-202ENST00000373720 ERVK11-1P61568 191 aa7.46□□□□□ -1.22
SNRNP40-202ENST00000373720 SNTB1Q13884 538 aaKnown RBP7.46□□□□□ -1.22
SNRNP40-202ENST00000373720 C2orf68Q2NKX9 166 aa7.46□□□□□ -1.22
SNRNP40-202ENST00000373720 TUSC1Q2TAM9 212 aa7.46□□□□□ -1.22
SNRNP40-202ENST00000373720 ACSF3Q4G176 576 aaPredicted RBP7.46□□□□□ -1.22
SNRNP40-202ENST00000373720 TIMM23BQ5SRD1 257 aa7.46□□□□□ -1.22
SNRNP40-202ENST00000373720 LDLRAD3Q86YD5 345 aa7.46□□□□□ -1.22
SNRNP40-202ENST00000373720 COMMD1Q8N668 190 aa7.46□□□□□ -1.22
SNRNP40-202ENST00000373720 POC1AQ8NBT0 407 aa7.46□□□□□ -1.22
SNRNP40-202ENST00000373720 OR8G5Q8NG78 346 aa7.46□□□□□ -1.22
SNRNP40-202ENST00000373720 OR10Z1Q8NGY1 313 aa7.46□□□□□ -1.22
SNRNP40-202ENST00000373720 PPP1R35Q8TAP8 253 aa7.46□□□□□ -1.22
SNRNP40-202ENST00000373720 HPSE2Q8WWQ2 592 aa7.46□□□□□ -1.22
SNRNP40-202ENST00000373720 DCUN1D4Q92564 292 aa7.46□□□□□ -1.22
SNRNP40-202ENST00000373720 RBPMSQ93062 196 aaKnown RBP7.46□□□□□ -1.22
SNRNP40-202ENST00000373720 ERGIC1Q969X5 290 aa7.46□□□□□ -1.22
SNRNP40-202ENST00000373720 TRIB1Q96RU8 372 aa7.46□□□□□ -1.22
SNRNP40-202ENST00000373720 CABLES2Q9BTV7 478 aa7.46□□□□□ -1.22
SNRNP40-202ENST00000373720 TOLLIPQ9H0E2 274 aa7.46□□□□□ -1.22
SNRNP40-202ENST00000373720 CXXC4Q9H2H0 198 aa7.46□□□□□ -1.22
SNRNP40-202ENST00000373720 SLC2A9Q9NRM0 540 aa7.46□□□□□ -1.22
SNRNP40-202ENST00000373720 TMEM100Q9NV29 134 aa7.46□□□□□ -1.22
SNRNP40-202ENST00000373720 MTCH1Q9NZJ7 389 aa7.46□□□□□ -1.22
SNRNP40-202ENST00000373720 PRSS50Q9UI38 385 aa7.46□□□□□ -1.22
SNRNP40-202ENST00000373720 GPR160Q9UJ42 338 aa7.46□□□□□ -1.22
SNRNP40-202ENST00000373720 BORCS7-ASMTA0A0B4J1R7 106 aa7.45□□□□□ -1.22
SNRNP40-202ENST00000373720 OR5H1A6NKK0 313 aa7.45□□□□□ -1.22
SNRNP40-202ENST00000373720 A8MXK9 166 aa7.45□□□□□ -1.22
SNRNP40-202ENST00000373720 C1QTNF9BB2RNN3 333 aa7.45□□□□□ -1.22
SNRNP40-202ENST00000373720 EEF1E1-BLOC1S5C9J1V9 151 aa7.45□□□□□ -1.22
SNRNP40-202ENST00000373720 SDCBPO00560 298 aaPredicted RBP7.45□□□□□ -1.22
SNRNP40-202ENST00000373720 MPPED1O15442 326 aa7.45□□□□□ -1.22
SNRNP40-202ENST00000373720 ST8SIA3O43173 380 aa7.45□□□□□ -1.22
SNRNP40-202ENST00000373720 DEDDO75618 318 aa7.45□□□□□ -1.22
SNRNP40-202ENST00000373720 PTBP3O95758 552 aaKnown RBP7.45□□□□□ -1.22
SNRNP40-202ENST00000373720 KNG1P01042 644 aa7.45□□□□□ -1.22
SNRNP40-202ENST00000373720 NMBP08949 121 aa7.45□□□□□ -1.22
SNRNP40-202ENST00000373720 PGA5P0DJD9 388 aa7.45□□□□□ -1.22
SNRNP40-202ENST00000373720 ZP3P21754 424 aa7.45□□□□□ -1.22
SNRNP40-202ENST00000373720 VDAC1P21796 283 aa7.45□□□□□ -1.22
SNRNP40-202ENST00000373720 IGHV1-2P23083 117 aa7.45□□□□□ -1.22
SNRNP40-202ENST00000373720 GCH1P30793 250 aa7.45□□□□□ -1.22
SNRNP40-202ENST00000373720 WNT5AP41221 380 aa7.45□□□□□ -1.22
SNRNP40-202ENST00000373720 KIR2DL2P43627 348 aaPredicted RBP7.45□□□□□ -1.22
SNRNP40-202ENST00000373720 NOVA1P51513 510 aaKnown RBP7.45□□□□□ -1.22
SNRNP40-202ENST00000373720 SELENOVP59797 346 aa7.45□□□□□ -1.22
SNRNP40-202ENST00000373720 BLOC1S1P78537 153 aa7.45□□□□□ -1.22
SNRNP40-202ENST00000373720 TCF15Q12870 199 aa7.45□□□□□ -1.22
SNRNP40-202ENST00000373720 TMEM187Q14656 261 aa7.45□□□□□ -1.22
SNRNP40-202ENST00000373720 GNMTQ14749 295 aa7.45□□□□□ -1.22
SNRNP40-202ENST00000373720 OR8G1Q15617 311 aa7.45□□□□□ -1.22
SNRNP40-202ENST00000373720 IAH1Q2TAA2 248 aaPredicted RBP7.45□□□□□ -1.22
SNRNP40-202ENST00000373720 TMEM30BQ3MIR4 351 aa7.45□□□□□ -1.22
SNRNP40-202ENST00000373720 PIGYQ3MUY2 71 aa7.45□□□□□ -1.22
SNRNP40-202ENST00000373720 RNFT1Q5M7Z0 435 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms