RNA–Protein interactions for RNA: ENST00000371429.3

NDC1-201, Transcript of NDC1 transmembrane nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC1, Length 5,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-201ENST00000371429 INSIG2Q9Y5U4 225 aa12.89□□□□□ -0.35
NDC1-201ENST00000371429 LIPGQ9Y5X9 500 aa12.89□□□□□ -0.35
NDC1-201ENST00000371429 INTS1Q8N201 2190 aaKnown RBP12.89□□□□□ -0.35
NDC1-201ENST00000371429 IGHV3OR15-7A0A075B7D8 119 aa12.89□□□□□ -0.35
NDC1-201ENST00000371429 RFPL4AA6NLU0 287 aa12.89□□□□□ -0.35
NDC1-201ENST00000371429 ZNF705GA8MUZ8 300 aaPredicted RBP12.89□□□□□ -0.35
NDC1-201ENST00000371429 RFPL4AL1F8VTS6 287 aa12.89□□□□□ -0.35
NDC1-201ENST00000371429 CD80P33681 288 aa12.89□□□□□ -0.35
NDC1-201ENST00000371429 GGTLC2Q14390 218 aa12.89□□□□□ -0.35
NDC1-201ENST00000371429 PCGF1Q9BSM1 259 aa12.89□□□□□ -0.35
NDC1-201ENST00000371429 SOCS1O15524 211 aa12.89□□□□□ -0.35
NDC1-201ENST00000371429 AKR1C3P42330 323 aa12.89□□□□□ -0.35
NDC1-201ENST00000371429 PDZK1IP1Q13113 114 aa12.89□□□□□ -0.35
NDC1-201ENST00000371429 ASB13Q8WXK3 278 aa12.89□□□□□ -0.35
NDC1-201ENST00000371429 ADAM19Q9H013 955 aa12.89□□□□□ -0.35
NDC1-201ENST00000371429 SLC25A32Q9H2D1 315 aa12.89□□□□□ -0.35
NDC1-201ENST00000371429 AAMDCQ9H7C9 122 aa12.89□□□□□ -0.35
NDC1-201ENST00000371429 NAA60Q9H7X0 242 aa12.89□□□□□ -0.35
NDC1-201ENST00000371429 PRSS50Q9UI38 385 aa12.89□□□□□ -0.35
NDC1-201ENST00000371429 KPTNQ9Y664 436 aa12.89□□□□□ -0.35
NDC1-201ENST00000371429 ZBTB37Q5TC79 503 aa12.89□□□□□ -0.35
NDC1-201ENST00000371429 GLDNQ6ZMI3 551 aaPredicted RBP12.89□□□□□ -0.35
NDC1-201ENST00000371429 OR5B3Q8NH48 314 aa12.89□□□□□ -0.35
NDC1-201ENST00000371429 GRAMD2BQ96HH9 432 aa12.89□□□□□ -0.35
NDC1-201ENST00000371429 RAB40CQ96S21 281 aa12.89□□□□□ -0.35
NDC1-201ENST00000371429 PRSS27Q9BQR3 290 aa12.89□□□□□ -0.35
NDC1-201ENST00000371429 CHRNA10Q9GZZ6 450 aa12.89□□□□□ -0.35
NDC1-201ENST00000371429 KCNMB2Q9Y691 235 aa12.89□□□□□ -0.35
NDC1-201ENST00000371429 PRSS44E7EML9 344 aa12.88□□□□□ -0.35
NDC1-201ENST00000371429 ADRA2AP08913 450 aa12.88□□□□□ -0.35
NDC1-201ENST00000371429 PMELP40967 661 aa12.88□□□□□ -0.35
NDC1-201ENST00000371429 RPL31P62899 125 aaKnown RBP12.88□□□□□ -0.35
NDC1-201ENST00000371429 FHL5Q5TD97 284 aa12.88□□□□□ -0.35
NDC1-201ENST00000371429 RPUSD3Q6P087 351 aaKnown RBP12.88□□□□□ -0.35
NDC1-201ENST00000371429 FAM122BQ7Z309 247 aa12.88□□□□□ -0.35
NDC1-201ENST00000371429 MRGPRGQ86SM5 289 aa12.88□□□□□ -0.35
NDC1-201ENST00000371429 SCNM1Q9BWG6 230 aa12.88□□□□□ -0.35
NDC1-201ENST00000371429 TUBG2Q9NRH3 451 aa12.88□□□□□ -0.35
NDC1-201ENST00000371429 CD37P11049 281 aa12.88□□□□□ -0.35
NDC1-201ENST00000371429 ETV3LQ6ZN32 361 aa12.88□□□□□ -0.35
NDC1-201ENST00000371429 DIRC2Q96SL1 478 aa12.88□□□□□ -0.35
NDC1-201ENST00000371429 HSD17B10Q99714 261 aaKnown RBP12.88□□□□□ -0.35
NDC1-201ENST00000371429 NPTNQ9Y639 398 aa12.88□□□□□ -0.35
NDC1-201ENST00000371429 URGCP-MRPS24S4R325 110 aa12.88□□□□□ -0.35
NDC1-201ENST00000371429 C20orf202A1L168 122 aa12.88□□□□□ -0.35
NDC1-201ENST00000371429 SFT2D2O95562 160 aa12.88□□□□□ -0.35
NDC1-201ENST00000371429 PAX6P26367 422 aa12.88□□□□□ -0.35
NDC1-201ENST00000371429 PPP1R1AQ13522 171 aa12.88□□□□□ -0.35
NDC1-201ENST00000371429 OR5I1Q13606 314 aa12.88□□□□□ -0.35
NDC1-201ENST00000371429 GABRA6Q16445 453 aa12.88□□□□□ -0.35
NDC1-201ENST00000371429 GAB2Q9UQC2 676 aa12.88□□□□□ -0.35
NDC1-201ENST00000371429 CA11O75493 328 aa12.88□□□□□ -0.35
NDC1-201ENST00000371429 C1QCP02747 245 aa12.88□□□□□ -0.35
NDC1-201ENST00000371429 IFI6P09912 130 aa12.88□□□□□ -0.35
NDC1-201ENST00000371429 DHRS2Q13268 280 aa12.88□□□□□ -0.35
NDC1-201ENST00000371429 MUC20Q8N307 709 aaPredicted RBP12.88□□□□□ -0.35
NDC1-201ENST00000371429 ZPLD1Q8TCW7 415 aa12.88□□□□□ -0.35
NDC1-201ENST00000371429 PDGFAP04085 211 aa12.87□□□□□ -0.35
NDC1-201ENST00000371429 SKA3Q8IX90 412 aa12.87□□□□□ -0.35
NDC1-201ENST00000371429 MS4A3Q96HJ5 214 aa12.87□□□□□ -0.35
NDC1-201ENST00000371429 SLC25A10Q9UBX3 287 aaPredicted RBP12.87□□□□□ -0.35
NDC1-201ENST00000371429 PLXNA1Q9UIW2 1896 aa12.87□□□□□ -0.35
NDC1-201ENST00000371429 K7ESF4 209 aa12.87□□□□□ -0.35
NDC1-201ENST00000371429 TMEM267Q0VDI3 215 aaPredicted RBP12.87□□□□□ -0.35
NDC1-201ENST00000371429 PRR27Q6MZM9 219 aa12.87□□□□□ -0.35
NDC1-201ENST00000371429 CRIPAKQ8N1N5 446 aa12.87□□□□□ -0.35
NDC1-201ENST00000371429 MYO16Q9Y6X6 1858 aa12.87□□□□□ -0.35
NDC1-201ENST00000371429 RAB19A4D1S5 217 aa12.87□□□□□ -0.35
NDC1-201ENST00000371429 CHEK1O14757 476 aa12.87□□□□□ -0.35
NDC1-201ENST00000371429 S100A4P26447 101 aaKnown RBP12.87□□□□□ -0.35
NDC1-201ENST00000371429 MVDP53602 400 aa12.87□□□□□ -0.35
NDC1-201ENST00000371429 FOXB2Q5VYV0 432 aa12.87□□□□□ -0.35
NDC1-201ENST00000371429 H3F3CQ6NXT2 135 aa12.87□□□□□ -0.35
NDC1-201ENST00000371429 OR52L2PQ8NGH6 319 aa12.87□□□□□ -0.35
NDC1-201ENST00000371429 ZNF519Q8TB69 540 aa12.87□□□□□ -0.35
NDC1-201ENST00000371429 RBPMSQ93062 196 aaKnown RBP12.87□□□□□ -0.35
NDC1-201ENST00000371429 TMUB1Q9BVT8 246 aa12.87□□□□□ -0.35
NDC1-201ENST00000371429 OR5AC1P0C628 307 aa12.87□□□□□ -0.35
NDC1-201ENST00000371429 OR4F17Q8NGA8 305 aa12.87□□□□□ -0.35
NDC1-201ENST00000371429 WDFY2Q96P53 400 aa12.87□□□□□ -0.35
NDC1-201ENST00000371429 DNASE2O00115 360 aaPredicted RBP12.86□□□□□ -0.35
NDC1-201ENST00000371429 RAB5CP51148 216 aa12.86□□□□□ -0.35
NDC1-201ENST00000371429 SPINK9Q5DT21 86 aa12.86□□□□□ -0.35
NDC1-201ENST00000371429 RAB18Q9NP72 206 aa12.86□□□□□ -0.35
NDC1-201ENST00000371429 COA4Q9NYJ1 87 aa12.86□□□□□ -0.35
NDC1-201ENST00000371429 TRAV39A0A0B4J263 110 aa12.86□□□□□ -0.35
NDC1-201ENST00000371429 CTRB1P17538 263 aa12.86□□□□□ -0.35
NDC1-201ENST00000371429 RPS4XP62701 263 aaKnown RBP12.86□□□□□ -0.35
NDC1-201ENST00000371429 SLC38A11Q08AI6 406 aa12.86□□□□□ -0.35
NDC1-201ENST00000371429 CTRB2Q6GPI1 263 aa12.86□□□□□ -0.35
NDC1-201ENST00000371429 SPNS3Q6ZMD2 512 aa12.86□□□□□ -0.35
NDC1-201ENST00000371429 LRRC3CA6NJW4 275 aa12.86□□□□□ -0.35
NDC1-201ENST00000371429 CNN1P51911 297 aaKnown RBP12.86□□□□□ -0.35
NDC1-201ENST00000371429 EXOSC2Q13868 293 aaKnown RBP12.86□□□□□ -0.35
NDC1-201ENST00000371429 PIGYQ3MUY2 71 aa12.86□□□□□ -0.35
NDC1-201ENST00000371429 RXFP4Q8TDU9 374 aa12.86□□□□□ -0.35
NDC1-201ENST00000371429 MITD1Q8WV92 249 aa12.86□□□□□ -0.35
NDC1-201ENST00000371429 CTHRC1Q96CG8 243 aa12.86□□□□□ -0.35
NDC1-201ENST00000371429 MS4A7Q9GZW8 240 aaPredicted RBP12.86□□□□□ -0.35
NDC1-201ENST00000371429 LPAR3Q9UBY5 353 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms