RNA–Protein interactions for RNA: ENST00000369592.1

SMNDC1-201, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SMNDC1, Length 1,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-201ENST00000369592 PAK1IP1Q9NWT1 392 aaPredicted RBP16.66■□□□□ 0.26
SMNDC1-201ENST00000369592 IL36GQ9NZH8 169 aa16.66■□□□□ 0.26
SMNDC1-201ENST00000369592 UBE2J1Q9Y385 318 aaPredicted RBP16.66■□□□□ 0.26
SMNDC1-201ENST00000369592 PAHP00439 452 aa16.65■□□□□ 0.26
SMNDC1-201ENST00000369592 CDK1P06493 297 aa16.65■□□□□ 0.26
SMNDC1-201ENST00000369592 COX7A1P24310 79 aa16.65■□□□□ 0.26
SMNDC1-201ENST00000369592 PTGFRP43088 359 aa16.65■□□□□ 0.26
SMNDC1-201ENST00000369592 PAX5Q02548 391 aa16.65■□□□□ 0.26
SMNDC1-201ENST00000369592 IL13RA2Q14627 380 aa16.65■□□□□ 0.26
SMNDC1-201ENST00000369592 NHLRC3Q5JS37 347 aa16.65■□□□□ 0.26
SMNDC1-201ENST00000369592 GDPGP1Q6ZNW5 385 aa16.65■□□□□ 0.26
SMNDC1-201ENST00000369592 DYNAPQ8N1N2 210 aa16.65■□□□□ 0.26
SMNDC1-201ENST00000369592 STX19Q8N4C7 294 aa16.65■□□□□ 0.26
SMNDC1-201ENST00000369592 OR4F5Q8NH21 305 aa16.65■□□□□ 0.26
SMNDC1-201ENST00000369592 TNFAIP8L1Q8WVP5 186 aa16.65■□□□□ 0.26
SMNDC1-201ENST00000369592 NKX3-1Q99801 234 aaPredicted RBP16.65■□□□□ 0.26
SMNDC1-201ENST00000369592 LSM2Q9Y333 95 aaKnown RBP16.65■□□□□ 0.26
SMNDC1-201ENST00000369592 TRAV8-7A0A075B6U6 113 aa16.64■□□□□ 0.25
SMNDC1-201ENST00000369592 TRAV24A0A0B4J272 114 aa16.64■□□□□ 0.25
SMNDC1-201ENST00000369592 MAGEA13PA6NCF6 341 aa16.64■□□□□ 0.25
SMNDC1-201ENST00000369592 VGLL3A8MV65 326 aa16.64■□□□□ 0.25
SMNDC1-201ENST00000369592 PIN1P1O15428 100 aa16.64■□□□□ 0.25
SMNDC1-201ENST00000369592 MAGEB3O15480 346 aa16.64■□□□□ 0.25
SMNDC1-201ENST00000369592 MMP23AO75900 390 aa16.64■□□□□ 0.25
SMNDC1-201ENST00000369592 CGB3P0DN86 165 aa16.64■□□□□ 0.25
SMNDC1-201ENST00000369592 CGB7P0DN87 165 aa16.64■□□□□ 0.25
SMNDC1-201ENST00000369592 BDKRB2P30411 391 aa16.64■□□□□ 0.25
SMNDC1-201ENST00000369592 OR3A4PP47883 348 aa16.64■□□□□ 0.25
SMNDC1-201ENST00000369592 GLIPR1P48060 266 aa16.64■□□□□ 0.25
SMNDC1-201ENST00000369592 BDH1Q02338 343 aa16.64■□□□□ 0.25
SMNDC1-201ENST00000369592 IRF3Q14653 427 aa16.64■□□□□ 0.25
SMNDC1-201ENST00000369592 LHFPL4Q7Z7J7 247 aa16.64■□□□□ 0.25
SMNDC1-201ENST00000369592 SGCDQ92629 289 aa16.64■□□□□ 0.25
SMNDC1-201ENST00000369592 PPA2Q9H2U2 334 aa16.64■□□□□ 0.25
SMNDC1-201ENST00000369592 NCOR1P1Q9H4R4 102 aa16.64■□□□□ 0.25
SMNDC1-201ENST00000369592 TBL2Q9Y4P3 447 aaKnown RBP16.64■□□□□ 0.25
SMNDC1-201ENST00000369592 SESN1Q9Y6P5 492 aa16.64■□□□□ 0.25
SMNDC1-201ENST00000369592 CLPSL1A2RUU4 121 aa16.63■□□□□ 0.25
SMNDC1-201ENST00000369592 DEGS1O15121 323 aa16.63■□□□□ 0.25
SMNDC1-201ENST00000369592 TSPAN9O75954 239 aa16.63■□□□□ 0.25
SMNDC1-201ENST00000369592 CRYBA1P05813 215 aa16.63■□□□□ 0.25
SMNDC1-201ENST00000369592 ZNF44P15621 663 aa16.63■□□□□ 0.25
SMNDC1-201ENST00000369592 MYF6P23409 242 aa16.63■□□□□ 0.25
SMNDC1-201ENST00000369592 PAX6P26367 422 aa16.63■□□□□ 0.25
SMNDC1-201ENST00000369592 SLC35A2P78381 396 aa16.63■□□□□ 0.25
SMNDC1-201ENST00000369592 AESQ08117 197 aa16.63■□□□□ 0.25
SMNDC1-201ENST00000369592 DDI2Q5TDH0 399 aa16.63■□□□□ 0.25
SMNDC1-201ENST00000369592 Q6ZSV7 163 aa16.63■□□□□ 0.25
SMNDC1-201ENST00000369592 SATL1Q86VE3 508 aa16.63■□□□□ 0.25
SMNDC1-201ENST00000369592 OR13D1Q8NGV5 346 aa16.63■□□□□ 0.25
SMNDC1-201ENST00000369592 SGMS2Q8NHU3 365 aa16.63■□□□□ 0.25
SMNDC1-201ENST00000369592 LINC01006Q8NI28 216 aa16.63■□□□□ 0.25
SMNDC1-201ENST00000369592 WFDC12Q8WWY7 111 aa16.63■□□□□ 0.25
SMNDC1-201ENST00000369592 DERL3Q96Q80 235 aa16.63■□□□□ 0.25
SMNDC1-201ENST00000369592 SSX3Q99909 188 aa16.63■□□□□ 0.25
SMNDC1-201ENST00000369592 ANKRD60Q9BZ19 345 aa16.63■□□□□ 0.25
SMNDC1-201ENST00000369592 DUSP21Q9H596 190 aa16.63■□□□□ 0.25
SMNDC1-201ENST00000369592 C16orf95Q9H693 158 aa16.63■□□□□ 0.25
SMNDC1-201ENST00000369592 IFT22Q9H7X7 185 aa16.63■□□□□ 0.25
SMNDC1-201ENST00000369592 BEX1Q9HBH7 125 aa16.63■□□□□ 0.25
SMNDC1-201ENST00000369592 TAS2R3Q9NYW6 316 aa16.63■□□□□ 0.25
SMNDC1-201ENST00000369592 PCDHGB5Q9Y5G0 923 aa16.63■□□□□ 0.25
SMNDC1-201ENST00000369592 ODAMA1E959 279 aa16.62■□□□□ 0.25
SMNDC1-201ENST00000369592 H3BUX3 64 aa16.62■□□□□ 0.25
SMNDC1-201ENST00000369592 MYL12BO14950 172 aa16.62■□□□□ 0.25
SMNDC1-201ENST00000369592 CDRT1O95170 752 aa16.62■□□□□ 0.25
SMNDC1-201ENST00000369592 CELP19835 753 aa16.62■□□□□ 0.25
SMNDC1-201ENST00000369592 ZNF93P35789 620 aaPredicted RBP16.62■□□□□ 0.25
SMNDC1-201ENST00000369592 PPP3R1P63098 170 aa16.62■□□□□ 0.25
SMNDC1-201ENST00000369592 RIPK1Q13546 671 aa16.62■□□□□ 0.25
SMNDC1-201ENST00000369592 LRRC75BQ2VPJ9 315 aa16.62■□□□□ 0.25
SMNDC1-201ENST00000369592 OLFML2AQ68BL7 652 aa16.62■□□□□ 0.25
SMNDC1-201ENST00000369592 UNQ9370/PRO34162Q6UXP9 181 aa16.62■□□□□ 0.25
SMNDC1-201ENST00000369592 HEPN1Q6WQI6 88 aa16.62■□□□□ 0.25
SMNDC1-201ENST00000369592 OR10K1Q8NGX5 313 aa16.62■□□□□ 0.25
SMNDC1-201ENST00000369592 OR14A2Q96R54 314 aa16.62■□□□□ 0.25
SMNDC1-201ENST00000369592 GPER1Q99527 375 aa16.62■□□□□ 0.25
SMNDC1-201ENST00000369592 FOXJ3Q9UPW0 622 aa16.62■□□□□ 0.25
SMNDC1-201ENST00000369592 IGHV2-26A0A0B4J1V2 119 aa16.61■□□□□ 0.25
SMNDC1-201ENST00000369592 FUOMA2VDF0 154 aa16.61■□□□□ 0.25
SMNDC1-201ENST00000369592 CLPXO76031 633 aa16.61■□□□□ 0.25
SMNDC1-201ENST00000369592 TGFBR2P37173 567 aa16.61■□□□□ 0.25
SMNDC1-201ENST00000369592 GP2P55259 537 aaKnown RBP16.61■□□□□ 0.25
SMNDC1-201ENST00000369592 PROK1P58294 105 aa16.61■□□□□ 0.25
SMNDC1-201ENST00000369592 SCN1BQ07699 218 aa16.61■□□□□ 0.25
SMNDC1-201ENST00000369592 PIGYQ3MUY2 71 aa16.61■□□□□ 0.25
SMNDC1-201ENST00000369592 CDH26Q8IXH8 852 aa16.61■□□□□ 0.25
SMNDC1-201ENST00000369592 MALSU1Q96EH3 234 aa16.61■□□□□ 0.25
SMNDC1-201ENST00000369592 ZNF184Q99676 751 aaPredicted RBP16.61■□□□□ 0.25
SMNDC1-201ENST00000369592 TMEM133Q9H2Q1 129 aa16.61■□□□□ 0.25
SMNDC1-201ENST00000369592 LINC00574Q9H8X3 128 aa16.61■□□□□ 0.25
SMNDC1-201ENST00000369592 ZNF581Q9P0T4 197 aa16.61■□□□□ 0.25
SMNDC1-201ENST00000369592 ERGIC3Q9Y282 383 aa16.61■□□□□ 0.25
SMNDC1-201ENST00000369592 WNK1Q9H4A3 2382 aa16.61■□□□□ 0.25
SMNDC1-201ENST00000369592 BTBD17A6NE02 478 aa16.6■□□□□ 0.25
SMNDC1-201ENST00000369592 ERICH4A6NGS2 130 aa16.6■□□□□ 0.25
SMNDC1-201ENST00000369592 ARG1P05089 322 aa16.6■□□□□ 0.25
SMNDC1-201ENST00000369592 CD34P28906 385 aa16.6■□□□□ 0.25
SMNDC1-201ENST00000369592 GDNFP39905 211 aa16.6■□□□□ 0.25
SMNDC1-201ENST00000369592 LGALS4P56470 323 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms