RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 MAGEB3O15480 346 aa15.36■□□□□ 0.05
CKS1B-203ENST00000368439 MMP23AO75900 390 aa15.36■□□□□ 0.05
CKS1B-203ENST00000368439 CD1AP06126 327 aa15.36■□□□□ 0.05
CKS1B-203ENST00000368439 ZNF44P15621 663 aa15.36■□□□□ 0.05
CKS1B-203ENST00000368439 OR3A4PP47883 348 aa15.36■□□□□ 0.05
CKS1B-203ENST00000368439 GLIPR1P48060 266 aa15.36■□□□□ 0.05
CKS1B-203ENST00000368439 WNT4P56705 351 aa15.36■□□□□ 0.05
CKS1B-203ENST00000368439 SCN1BQ07699 218 aa15.36■□□□□ 0.05
CKS1B-203ENST00000368439 AESQ08117 197 aa15.36■□□□□ 0.05
CKS1B-203ENST00000368439 C6orf141Q5SZD1 244 aa15.36■□□□□ 0.05
CKS1B-203ENST00000368439 RNLSQ5VYX0 342 aa15.36■□□□□ 0.05
CKS1B-203ENST00000368439 OLFML2AQ68BL7 652 aa15.36■□□□□ 0.05
CKS1B-203ENST00000368439 Q6ZSV7 163 aa15.36■□□□□ 0.05
CKS1B-203ENST00000368439 OR13D1Q8NGV5 346 aa15.36■□□□□ 0.05
CKS1B-203ENST00000368439 PIFOQ8TCI5 191 aa15.36■□□□□ 0.05
CKS1B-203ENST00000368439 CORO2AQ92828 525 aa15.36■□□□□ 0.05
CKS1B-203ENST00000368439 CPNE2Q96FN4 548 aaPredicted RBP15.36■□□□□ 0.05
CKS1B-203ENST00000368439 GPER1Q99527 375 aa15.36■□□□□ 0.05
CKS1B-203ENST00000368439 UBE2J1Q9Y385 318 aaPredicted RBP15.36■□□□□ 0.05
CKS1B-203ENST00000368439 PCDHGB5Q9Y5G0 923 aa15.36■□□□□ 0.05
CKS1B-203ENST00000368439 CMYA5Q8N3K9 4069 aa15.36■□□□□ 0.05
CKS1B-203ENST00000368439 TRAV8-7A0A075B6U6 113 aa15.35■□□□□ 0.05
CKS1B-203ENST00000368439 CLPSL1A2RUU4 121 aa15.35■□□□□ 0.05
CKS1B-203ENST00000368439 MAGEA13PA6NCF6 341 aa15.35■□□□□ 0.05
CKS1B-203ENST00000368439 BTBD17A6NE02 478 aa15.35■□□□□ 0.05
CKS1B-203ENST00000368439 DEGS1O15121 323 aa15.35■□□□□ 0.05
CKS1B-203ENST00000368439 BDKRB2P30411 391 aa15.35■□□□□ 0.05
CKS1B-203ENST00000368439 PTGFRP43088 359 aa15.35■□□□□ 0.05
CKS1B-203ENST00000368439 TAS2R43P59537 309 aa15.35■□□□□ 0.05
CKS1B-203ENST00000368439 DDI2Q5TDH0 399 aa15.35■□□□□ 0.05
CKS1B-203ENST00000368439 OR10K1Q8NGX5 313 aa15.35■□□□□ 0.05
CKS1B-203ENST00000368439 SGMS2Q8NHU3 365 aa15.35■□□□□ 0.05
CKS1B-203ENST00000368439 LINC01006Q8NI28 216 aa15.35■□□□□ 0.05
CKS1B-203ENST00000368439 WFDC12Q8WWY7 111 aa15.35■□□□□ 0.05
CKS1B-203ENST00000368439 SESN1Q9Y6P5 492 aa15.35■□□□□ 0.05
CKS1B-203ENST00000368439 PKD1L1Q8TDX9 2849 aa15.35■□□□□ 0.05
CKS1B-203ENST00000368439 TRAV24A0A0B4J272 114 aa15.34■□□□□ 0.05
CKS1B-203ENST00000368439 PNMA8CA0A1B0GUJ8 204 aa15.34■□□□□ 0.05
CKS1B-203ENST00000368439 MYL12BO14950 172 aa15.34■□□□□ 0.05
CKS1B-203ENST00000368439 CLPXO76031 633 aa15.34■□□□□ 0.05
CKS1B-203ENST00000368439 CDRT1O95170 752 aa15.34■□□□□ 0.05
CKS1B-203ENST00000368439 ARG1P05089 322 aa15.34■□□□□ 0.05
CKS1B-203ENST00000368439 CDK1P06493 297 aa15.34■□□□□ 0.05
CKS1B-203ENST00000368439 FSTP19883 344 aa15.34■□□□□ 0.05
CKS1B-203ENST00000368439 ZNF93P35789 620 aaPredicted RBP15.34■□□□□ 0.05
CKS1B-203ENST00000368439 LGALS4P56470 323 aa15.34■□□□□ 0.05
CKS1B-203ENST00000368439 KRTAP10-3P60369 221 aa15.34■□□□□ 0.05
CKS1B-203ENST00000368439 PPP3R1P63098 170 aa15.34■□□□□ 0.05
CKS1B-203ENST00000368439 RIPK1Q13546 671 aa15.34■□□□□ 0.05
CKS1B-203ENST00000368439 IL13RA2Q14627 380 aa15.34■□□□□ 0.05
CKS1B-203ENST00000368439 LRRC75BQ2VPJ9 315 aa15.34■□□□□ 0.05
CKS1B-203ENST00000368439 SGCDQ92629 289 aa15.34■□□□□ 0.05
CKS1B-203ENST00000368439 OR14A2Q96R54 314 aa15.34■□□□□ 0.05
CKS1B-203ENST00000368439 NR1H4Q96RI1 486 aaPredicted RBP15.34■□□□□ 0.05
CKS1B-203ENST00000368439 C16orf95Q9H693 158 aa15.34■□□□□ 0.05
CKS1B-203ENST00000368439 PAK1IP1Q9NWT1 392 aaPredicted RBP15.34■□□□□ 0.05
CKS1B-203ENST00000368439 IL36GQ9NZH8 169 aa15.34■□□□□ 0.05
CKS1B-203ENST00000368439 TBL2Q9Y4P3 447 aaKnown RBP15.34■□□□□ 0.05
CKS1B-203ENST00000368439 ODAMA1E959 279 aa15.33■□□□□ 0.04
CKS1B-203ENST00000368439 ERICH4A6NGS2 130 aa15.33■□□□□ 0.04
CKS1B-203ENST00000368439 VGLL3A8MV65 326 aa15.33■□□□□ 0.04
CKS1B-203ENST00000368439 PIN1P1O15428 100 aa15.33■□□□□ 0.04
CKS1B-203ENST00000368439 TSPAN9O75954 239 aa15.33■□□□□ 0.04
CKS1B-203ENST00000368439 CELP19835 753 aa15.33■□□□□ 0.04
CKS1B-203ENST00000368439 TGFBR2P37173 567 aa15.33■□□□□ 0.04
CKS1B-203ENST00000368439 GDNFP39905 211 aa15.33■□□□□ 0.04
CKS1B-203ENST00000368439 SRSF4Q08170 494 aaKnown RBP15.33■□□□□ 0.04
CKS1B-203ENST00000368439 ATXN7L3Q14CW9 347 aaPredicted RBP15.33■□□□□ 0.04
CKS1B-203ENST00000368439 RSU1Q15404 277 aa15.33■□□□□ 0.04
CKS1B-203ENST00000368439 PIGYQ3MUY2 71 aa15.33■□□□□ 0.04
CKS1B-203ENST00000368439 DHRS7BQ6IAN0 325 aaPredicted RBP15.33■□□□□ 0.04
CKS1B-203ENST00000368439 BAIAP2L2Q6UXY1 529 aa15.33■□□□□ 0.04
CKS1B-203ENST00000368439 LYPD6Q86Y78 171 aa15.33■□□□□ 0.04
CKS1B-203ENST00000368439 DERL3Q96Q80 235 aa15.33■□□□□ 0.04
CKS1B-203ENST00000368439 ZNF184Q99676 751 aaPredicted RBP15.33■□□□□ 0.04
CKS1B-203ENST00000368439 CDCA4Q9BXL8 241 aa15.33■□□□□ 0.04
CKS1B-203ENST00000368439 FAM192AQ9GZU8 254 aa15.33■□□□□ 0.04
CKS1B-203ENST00000368439 PPIL3Q9H2H8 161 aaKnown RBP15.33■□□□□ 0.04
CKS1B-203ENST00000368439 TMEM133Q9H2Q1 129 aa15.33■□□□□ 0.04
CKS1B-203ENST00000368439 TAS2R3Q9NYW6 316 aa15.33■□□□□ 0.04
CKS1B-203ENST00000368439 ZNF581Q9P0T4 197 aa15.33■□□□□ 0.04
CKS1B-203ENST00000368439 LSM2Q9Y333 95 aaKnown RBP15.33■□□□□ 0.04
CKS1B-203ENST00000368439 TRGV10A0A0A0MS01 117 aa15.32■□□□□ 0.04
CKS1B-203ENST00000368439 IGHV2-26A0A0B4J1V2 119 aa15.32■□□□□ 0.04
CKS1B-203ENST00000368439 A0A1W2PPK0 400 aa15.32■□□□□ 0.04
CKS1B-203ENST00000368439 FUOMA2VDF0 154 aa15.32■□□□□ 0.04
CKS1B-203ENST00000368439 HTR3BO95264 441 aa15.32■□□□□ 0.04
CKS1B-203ENST00000368439 CGB3P0DN86 165 aa15.32■□□□□ 0.04
CKS1B-203ENST00000368439 CGB7P0DN87 165 aa15.32■□□□□ 0.04
CKS1B-203ENST00000368439 PROK1P58294 105 aa15.32■□□□□ 0.04
CKS1B-203ENST00000368439 BDH1Q02338 343 aa15.32■□□□□ 0.04
CKS1B-203ENST00000368439 LY6EQ16553 131 aa15.32■□□□□ 0.04
CKS1B-203ENST00000368439 NHLRC3Q5JS37 347 aa15.32■□□□□ 0.04
CKS1B-203ENST00000368439 KRBOX4Q5JUW0 171 aa15.32■□□□□ 0.04
CKS1B-203ENST00000368439 HEPN1Q6WQI6 88 aa15.32■□□□□ 0.04
CKS1B-203ENST00000368439 TRAPPC6BQ86SZ2 158 aa15.32■□□□□ 0.04
CKS1B-203ENST00000368439 MALSU1Q96EH3 234 aa15.32■□□□□ 0.04
CKS1B-203ENST00000368439 METTL9Q9H1A3 318 aa15.32■□□□□ 0.04
CKS1B-203ENST00000368439 ING4Q9UNL4 249 aa15.32■□□□□ 0.04
CKS1B-203ENST00000368439 ERGIC3Q9Y282 383 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms