RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 DNAH2Q9P225 4427 aa11.23□□□□□ -0.61
VAMP4-202ENST00000367740 IGKV1-27A0A075B6S5 117 aa11.22□□□□□ -0.61
VAMP4-202ENST00000367740 IGHV4OR15-8A0A075B7B6 117 aa11.22□□□□□ -0.61
VAMP4-202ENST00000367740 A0A087WW49 117 aa11.22□□□□□ -0.61
VAMP4-202ENST00000367740 IGHV3-72A0A0B4J1Y9 119 aa11.22□□□□□ -0.61
VAMP4-202ENST00000367740 TMEM269A0A1B0GVZ9 245 aa11.22□□□□□ -0.61
VAMP4-202ENST00000367740 A6NIN4 97 aa11.22□□□□□ -0.61
VAMP4-202ENST00000367740 ACOD1A6NK06 481 aa11.22□□□□□ -0.61
VAMP4-202ENST00000367740 SIRPB1O00241 398 aa11.22□□□□□ -0.61
VAMP4-202ENST00000367740 IGLV1-40P01703 118 aa11.22□□□□□ -0.61
VAMP4-202ENST00000367740 OR5H8P0DN80 308 aa11.22□□□□□ -0.61
VAMP4-202ENST00000367740 AESQ08117 197 aa11.22□□□□□ -0.61
VAMP4-202ENST00000367740 METTL21CQ5VZV1 264 aa11.22□□□□□ -0.61
VAMP4-202ENST00000367740 S1PR3Q99500 378 aa11.22□□□□□ -0.61
VAMP4-202ENST00000367740 BTBD10Q9BSF8 475 aa11.22□□□□□ -0.61
VAMP4-202ENST00000367740 TMED9Q9BVK6 235 aa11.22□□□□□ -0.61
VAMP4-202ENST00000367740 TSSK6Q9BXA6 273 aa11.22□□□□□ -0.61
VAMP4-202ENST00000367740 KRTAP4-5Q9BYR2 181 aa11.22□□□□□ -0.61
VAMP4-202ENST00000367740 TUBA4BQ9H853 241 aa11.22□□□□□ -0.61
VAMP4-202ENST00000367740 TPSG1Q9NRR2 321 aa11.22□□□□□ -0.61
VAMP4-202ENST00000367740 RBFOX1Q9NWB1 397 aaKnown RBP11.22□□□□□ -0.61
VAMP4-202ENST00000367740 CHCHD3Q9NX63 227 aaKnown RBP11.22□□□□□ -0.61
VAMP4-202ENST00000367740 AP3M1Q9Y2T2 418 aa11.22□□□□□ -0.61
VAMP4-202ENST00000367740 CEPT1Q9Y6K0 416 aa11.22□□□□□ -0.61
VAMP4-202ENST00000367740 FAM230AA0A1W2PPH8 454 aa11.21□□□□□ -0.61
VAMP4-202ENST00000367740 ODAMA1E959 279 aa11.21□□□□□ -0.61
VAMP4-202ENST00000367740 ENTPD6O75354 484 aa11.21□□□□□ -0.61
VAMP4-202ENST00000367740 SEMG1P04279 462 aa11.21□□□□□ -0.61
VAMP4-202ENST00000367740 ZNF3P17036 446 aa11.21□□□□□ -0.61
VAMP4-202ENST00000367740 SNU13P55769 128 aaKnown RBP11.21□□□□□ -0.61
VAMP4-202ENST00000367740 ZNF146Q15072 292 aa11.21□□□□□ -0.61
VAMP4-202ENST00000367740 LINC00322Q6ZN03 302 aaPredicted RBP11.21□□□□□ -0.61
VAMP4-202ENST00000367740 SLC25A26Q70HW3 274 aa11.21□□□□□ -0.61
VAMP4-202ENST00000367740 ARPINQ7Z6K5 226 aa11.21□□□□□ -0.61
VAMP4-202ENST00000367740 ENTHD1Q8IYW4 607 aa11.21□□□□□ -0.61
VAMP4-202ENST00000367740 OR9Q2Q8NGE9 314 aa11.21□□□□□ -0.61
VAMP4-202ENST00000367740 RASL11BQ9BPW5 248 aa11.21□□□□□ -0.61
VAMP4-202ENST00000367740 THAP7Q9BT49 309 aaPredicted RBP11.21□□□□□ -0.61
VAMP4-202ENST00000367740 CCDC134Q9H6E4 229 aa11.21□□□□□ -0.61
VAMP4-202ENST00000367740 NUFIP1Q9UHK0 495 aaKnown RBP11.21□□□□□ -0.61
VAMP4-202ENST00000367740 STUB1Q9UNE7 303 aa11.21□□□□□ -0.61
VAMP4-202ENST00000367740 PSG11Q9UQ72 335 aa11.21□□□□□ -0.61
VAMP4-202ENST00000367740 V9GYS6 101 aa11.21□□□□□ -0.61
VAMP4-202ENST00000367740 DYNC1H1Q14204 4646 aaKnown RBP11.21□□□□□ -0.62
VAMP4-202ENST00000367740 IGHV1-3A0A0C4DH29 117 aa11.2□□□□□ -0.62
VAMP4-202ENST00000367740 A0A0G2JND7 137 aa11.2□□□□□ -0.62
VAMP4-202ENST00000367740 ZNF729A6NN14 1252 aaPredicted RBP11.2□□□□□ -0.62
VAMP4-202ENST00000367740 RIIAD1A6NNX1 92 aa11.2□□□□□ -0.62
VAMP4-202ENST00000367740 G3V318 75 aa11.2□□□□□ -0.62
VAMP4-202ENST00000367740 HSD17B6O14756 317 aa11.2□□□□□ -0.62
VAMP4-202ENST00000367740 IFNGP01579 166 aa11.2□□□□□ -0.62
VAMP4-202ENST00000367740 TTRP02766 147 aa11.2□□□□□ -0.62
VAMP4-202ENST00000367740 RRM2P31350 389 aa11.2□□□□□ -0.62
VAMP4-202ENST00000367740 SOX6P35712 828 aa11.2□□□□□ -0.62
VAMP4-202ENST00000367740 NPBWR2P48146 333 aa11.2□□□□□ -0.62
VAMP4-202ENST00000367740 RAB9AP51151 201 aa11.2□□□□□ -0.62
VAMP4-202ENST00000367740 MFGE8Q08431 387 aaPredicted RBP11.2□□□□□ -0.62
VAMP4-202ENST00000367740 ZNF816Q0VGE8 651 aaPredicted RBP11.2□□□□□ -0.62
VAMP4-202ENST00000367740 PMS2P11Q13670 270 aa11.2□□□□□ -0.62
VAMP4-202ENST00000367740 MAPRE2Q15555 327 aa11.2□□□□□ -0.62
VAMP4-202ENST00000367740 RASSF6Q6ZTQ3 369 aa11.2□□□□□ -0.62
VAMP4-202ENST00000367740 MOB3BQ86TA1 216 aa11.2□□□□□ -0.62
VAMP4-202ENST00000367740 OR2T33Q8NG76 320 aa11.2□□□□□ -0.62
VAMP4-202ENST00000367740 OR2T10Q8NGZ9 312 aa11.2□□□□□ -0.62
VAMP4-202ENST00000367740 HAVCR2Q8TDQ0 301 aa11.2□□□□□ -0.62
VAMP4-202ENST00000367740 RCN3Q96D15 328 aa11.2□□□□□ -0.62
VAMP4-202ENST00000367740 COQ2Q96H96 371 aa11.2□□□□□ -0.62
VAMP4-202ENST00000367740 MNTQ99583 582 aa11.2□□□□□ -0.62
VAMP4-202ENST00000367740 TOLLIPQ9H0E2 274 aa11.2□□□□□ -0.62
VAMP4-202ENST00000367740 CMC2Q9NRP2 79 aa11.2□□□□□ -0.62
VAMP4-202ENST00000367740 ARMC1Q9NVT9 282 aa11.2□□□□□ -0.62
VAMP4-202ENST00000367740 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.2□□□□□ -0.62
VAMP4-202ENST00000367740 BAIAP2Q9UQB8 552 aa11.2□□□□□ -0.62
VAMP4-202ENST00000367740 V9GYQ6 96 aa11.2□□□□□ -0.62
VAMP4-202ENST00000367740 V9GYY5 206 aaPredicted RBP11.2□□□□□ -0.62
VAMP4-202ENST00000367740 FUOMA2VDF0 154 aa11.19□□□□□ -0.62
VAMP4-202ENST00000367740 CXorf65A6NEN9 183 aa11.19□□□□□ -0.62
VAMP4-202ENST00000367740 NUPR2A6NF83 97 aa11.19□□□□□ -0.62
VAMP4-202ENST00000367740 SOX14O95416 240 aa11.19□□□□□ -0.62
VAMP4-202ENST00000367740 MED14OSP0DP75 135 aa11.19□□□□□ -0.62
VAMP4-202ENST00000367740 CALCBP10092 127 aa11.19□□□□□ -0.62
VAMP4-202ENST00000367740 ALOX5APP20292 161 aa11.19□□□□□ -0.62
VAMP4-202ENST00000367740 REG1BP48304 166 aa11.19□□□□□ -0.62
VAMP4-202ENST00000367740 GNG10P50151 68 aa11.19□□□□□ -0.62
VAMP4-202ENST00000367740 CDC42P60953 191 aa11.19□□□□□ -0.62
VAMP4-202ENST00000367740 SAMD4BQ5PRF9 694 aaKnown RBP11.19□□□□□ -0.62
VAMP4-202ENST00000367740 ANKRD13BQ86YJ7 626 aa11.19□□□□□ -0.62
VAMP4-202ENST00000367740 Q8IYB0 196 aa11.19□□□□□ -0.62
VAMP4-202ENST00000367740 FAM58AQ8N1B3 248 aa11.19□□□□□ -0.62
VAMP4-202ENST00000367740 OR14K1Q8NGZ2 314 aa11.19□□□□□ -0.62
VAMP4-202ENST00000367740 OTULINQ96BN8 352 aa11.19□□□□□ -0.62
VAMP4-202ENST00000367740 CHCHD6Q9BRQ6 235 aa11.19□□□□□ -0.62
VAMP4-202ENST00000367740 RSRP1Q9BUV0 290 aa11.19□□□□□ -0.62
VAMP4-202ENST00000367740 SAMD4AQ9UPU9 718 aaKnown RBP11.19□□□□□ -0.62
VAMP4-202ENST00000367740 WSB1Q9Y6I7 421 aa11.19□□□□□ -0.62
VAMP4-202ENST00000367740 TRBV2A0A0J9YWF9 115 aa11.18□□□□□ -0.62
VAMP4-202ENST00000367740 KBTBD11-OT1A0A1B0GTJ5 212 aa11.18□□□□□ -0.62
VAMP4-202ENST00000367740 PRR32B1ATL7 298 aa11.18□□□□□ -0.62
VAMP4-202ENST00000367740 OR2H2O95918 312 aa11.18□□□□□ -0.62
VAMP4-202ENST00000367740 LGALS1P09382 135 aaKnown RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms