RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 GALP22466 123 aa11.79□□□□□ -0.52
SRGAP3-201ENST00000360413 TAS2R60P59551 318 aa11.79□□□□□ -0.52
SRGAP3-201ENST00000360413 OR2A5Q96R48 311 aa11.79□□□□□ -0.52
SRGAP3-201ENST00000360413 DOK1Q99704 481 aa11.79□□□□□ -0.52
SRGAP3-201ENST00000360413 GVINP1Q7Z2Y8 2422 aa11.79□□□□□ -0.52
SRGAP3-201ENST00000360413 FOCADQ5VW36 1801 aa11.79□□□□□ -0.52
SRGAP3-201ENST00000360413 TRAV38-1A0A0B4J264 116 aa11.79□□□□□ -0.52
SRGAP3-201ENST00000360413 MBPP02686 304 aaPredicted RBP11.79□□□□□ -0.52
SRGAP3-201ENST00000360413 PGA4P0DJD7 388 aa11.79□□□□□ -0.52
SRGAP3-201ENST00000360413 PGA5P0DJD9 388 aa11.79□□□□□ -0.52
SRGAP3-201ENST00000360413 ADIPOQQ15848 244 aa11.79□□□□□ -0.52
SRGAP3-201ENST00000360413 SLC25A26Q70HW3 274 aa11.79□□□□□ -0.52
SRGAP3-201ENST00000360413 GNRHR2Q96P88 292 aa11.79□□□□□ -0.52
SRGAP3-201ENST00000360413 K7ESF4 209 aa11.79□□□□□ -0.52
SRGAP3-201ENST00000360413 CDX4O14627 284 aaPredicted RBP11.79□□□□□ -0.52
SRGAP3-201ENST00000360413 RPS27P42677 84 aaKnown RBP11.79□□□□□ -0.52
SRGAP3-201ENST00000360413 WNT3P56703 355 aa11.79□□□□□ -0.52
SRGAP3-201ENST00000360413 C5orf17Q8NAS9 161 aa11.79□□□□□ -0.52
SRGAP3-201ENST00000360413 OR2Z1Q8NG97 314 aa11.79□□□□□ -0.52
SRGAP3-201ENST00000360413 OR52N5Q8NH56 324 aa11.79□□□□□ -0.52
SRGAP3-201ENST00000360413 SPACA9Q96E40 222 aaPredicted RBP11.79□□□□□ -0.52
SRGAP3-201ENST00000360413 COL25A1Q9BXS0 654 aaPredicted RBP11.79□□□□□ -0.52
SRGAP3-201ENST00000360413 ZNF576Q9H609 170 aa11.79□□□□□ -0.52
SRGAP3-201ENST00000360413 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.79□□□□□ -0.52
SRGAP3-201ENST00000360413 IGKV6D-21A0A0A0MT36 114 aa11.79□□□□□ -0.52
SRGAP3-201ENST00000360413 CXorf65A6NEN9 183 aa11.79□□□□□ -0.52
SRGAP3-201ENST00000360413 TSPAN13O95857 204 aa11.79□□□□□ -0.52
SRGAP3-201ENST00000360413 KCNMB1Q16558 191 aa11.79□□□□□ -0.52
SRGAP3-201ENST00000360413 C19orf54Q5BKX5 351 aa11.79□□□□□ -0.52
SRGAP3-201ENST00000360413 YRDCQ86U90 279 aaKnown RBP11.79□□□□□ -0.52
SRGAP3-201ENST00000360413 VAX2Q9UIW0 290 aa11.79□□□□□ -0.52
SRGAP3-201ENST00000360413 TRBV23-1A0A0A0MS06 115 aa11.79□□□□□ -0.52
SRGAP3-201ENST00000360413 F2RL2O00254 374 aa11.79□□□□□ -0.52
SRGAP3-201ENST00000360413 TNFSF11O14788 317 aa11.79□□□□□ -0.52
SRGAP3-201ENST00000360413 ACTL6AO96019 429 aa11.79□□□□□ -0.52
SRGAP3-201ENST00000360413 OR5AC1P0C628 307 aa11.79□□□□□ -0.52
SRGAP3-201ENST00000360413 FAM3BP58499 235 aaPredicted RBP11.79□□□□□ -0.52
SRGAP3-201ENST00000360413 PPP2CBP62714 309 aa11.79□□□□□ -0.52
SRGAP3-201ENST00000360413 TCTN3Q6NUS6 607 aa11.79□□□□□ -0.52
SRGAP3-201ENST00000360413 BCORP1Q8N888 145 aa11.79□□□□□ -0.52
SRGAP3-201ENST00000360413 SLC37A2Q8TED4 501 aa11.79□□□□□ -0.52
SRGAP3-201ENST00000360413 RBM14Q96PK6 669 aaKnown RBP11.79□□□□□ -0.52
SRGAP3-201ENST00000360413 SYNGR2O43760 224 aa11.78□□□□□ -0.52
SRGAP3-201ENST00000360413 UQCR10Q9UDW1 63 aa11.78□□□□□ -0.52
SRGAP3-201ENST00000360413 SPRY1O43609 319 aaPredicted RBP11.78□□□□□ -0.52
SRGAP3-201ENST00000360413 GNG10P50151 68 aa11.78□□□□□ -0.52
SRGAP3-201ENST00000360413 LINC00518Q8N0U6 118 aa11.78□□□□□ -0.52
SRGAP3-201ENST00000360413 ADAMTS5Q9UNA0 930 aa11.78□□□□□ -0.52
SRGAP3-201ENST00000360413 HLA-GP17693 338 aa11.78□□□□□ -0.52
SRGAP3-201ENST00000360413 KLF3P57682 345 aaPredicted RBP11.78□□□□□ -0.52
SRGAP3-201ENST00000360413 MRPL54Q6P161 138 aaKnown RBP11.78□□□□□ -0.52
SRGAP3-201ENST00000360413 OR1N2Q8NGR9 330 aa11.78□□□□□ -0.52
SRGAP3-201ENST00000360413 RGP1Q92546 391 aaPredicted RBP11.78□□□□□ -0.52
SRGAP3-201ENST00000360413 C3orf85A0A1B0GTC6 90 aa11.78□□□□□ -0.52
SRGAP3-201ENST00000360413 A0A1W2PPC4 97 aa11.78□□□□□ -0.52
SRGAP3-201ENST00000360413 NPPBP16860 134 aa11.78□□□□□ -0.52
SRGAP3-201ENST00000360413 METAP1P53582 386 aa11.78□□□□□ -0.52
SRGAP3-201ENST00000360413 KHDC3LQ587J8 217 aa11.78□□□□□ -0.52
SRGAP3-201ENST00000360413 OR2V1Q8NHB1 315 aa11.78□□□□□ -0.52
SRGAP3-201ENST00000360413 FAHD2AQ96GK7 314 aa11.78□□□□□ -0.52
SRGAP3-201ENST00000360413 SIGLEC11Q96RL6 698 aa11.78□□□□□ -0.52
SRGAP3-201ENST00000360413 PHF7Q9BWX1 381 aaPredicted RBP11.78□□□□□ -0.52
SRGAP3-201ENST00000360413 CLEC5AQ9NY25 188 aa11.78□□□□□ -0.52
SRGAP3-201ENST00000360413 DHCR7Q9UBM7 475 aaKnown RBP11.78□□□□□ -0.52
SRGAP3-201ENST00000360413 DAPP1Q9UN19 280 aa11.78□□□□□ -0.52
SRGAP3-201ENST00000360413 DNLZQ5SXM8 178 aa11.78□□□□□ -0.52
SRGAP3-201ENST00000360413 THAP10Q9P2Z0 257 aaPredicted RBP11.78□□□□□ -0.52
SRGAP3-201ENST00000360413 SSC5DA1L4H1 1573 aa11.78□□□□□ -0.52
SRGAP3-201ENST00000360413 ATF1P18846 271 aa11.78□□□□□ -0.52
SRGAP3-201ENST00000360413 FGF9P31371 208 aaPredicted RBP11.78□□□□□ -0.52
SRGAP3-201ENST00000360413 KLRB1Q12918 225 aa11.78□□□□□ -0.52
SRGAP3-201ENST00000360413 ANKRD55Q3KP44 614 aa11.78□□□□□ -0.52
SRGAP3-201ENST00000360413 OR1F12Q8NHA8 337 aa11.78□□□□□ -0.52
SRGAP3-201ENST00000360413 LMX1BO60663 402 aa11.78□□□□□ -0.52
SRGAP3-201ENST00000360413 RNF165Q6ZSG1 346 aa11.78□□□□□ -0.52
SRGAP3-201ENST00000360413 HSD17B10Q99714 261 aaKnown RBP11.78□□□□□ -0.52
SRGAP3-201ENST00000360413 C1QTNF6Q9BXI9 259 aa11.78□□□□□ -0.52
SRGAP3-201ENST00000360413 Q7L0L9 218 aa11.77□□□□□ -0.52
SRGAP3-201ENST00000360413 PTP4A1Q93096 173 aa11.77□□□□□ -0.52
SRGAP3-201ENST00000360413 ZNF707Q96C28 371 aaPredicted RBP11.77□□□□□ -0.52
SRGAP3-201ENST00000360413 NTMQ9P121 344 aa11.77□□□□□ -0.52
SRGAP3-201ENST00000360413 LOXL2Q9Y4K0 774 aa11.77□□□□□ -0.52
SRGAP3-201ENST00000360413 TNFSF15O95150 251 aa11.77□□□□□ -0.52
SRGAP3-201ENST00000360413 F12P00748 615 aaPredicted RBP11.77□□□□□ -0.52
SRGAP3-201ENST00000360413 CAPZBP47756 277 aa11.77□□□□□ -0.52
SRGAP3-201ENST00000360413 INSL4Q14641 139 aa11.77□□□□□ -0.52
SRGAP3-201ENST00000360413 DMRTA1Q5VZB9 504 aa11.77□□□□□ -0.52
SRGAP3-201ENST00000360413 HSPB9Q9BQS6 159 aa11.77□□□□□ -0.52
SRGAP3-201ENST00000360413 SLC52A3Q9NQ40 469 aa11.77□□□□□ -0.52
SRGAP3-201ENST00000360413 FCMRO60667 390 aa11.77□□□□□ -0.53
SRGAP3-201ENST00000360413 FAM157BP0CG42 384 aa11.77□□□□□ -0.53
SRGAP3-201ENST00000360413 INSM1Q01101 510 aaPredicted RBP11.77□□□□□ -0.53
SRGAP3-201ENST00000360413 DMRTC1Q5HYR2 192 aa11.77□□□□□ -0.53
SRGAP3-201ENST00000360413 ARHGAP5-AS1Q96IT6 56 aa11.77□□□□□ -0.53
SRGAP3-201ENST00000360413 TECRQ9NZ01 308 aaKnown RBP11.77□□□□□ -0.53
SRGAP3-201ENST00000360413 PDE6DO43924 150 aa11.77□□□□□ -0.53
SRGAP3-201ENST00000360413 NUDT3O95989 172 aa11.77□□□□□ -0.53
SRGAP3-201ENST00000360413 SRFP11831 508 aa11.77□□□□□ -0.53
SRGAP3-201ENST00000360413 NCOR1O75376 2440 aa11.77□□□□□ -0.53
SRGAP3-201ENST00000360413 CTAG2O75638 210 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms