RNA–Protein interactions for RNA: ENST00000349893.8

COPE-202, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 2 BASIC

Gene COPE, Length 948 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-202ENST00000349893 HERC2O95714 4834 aa12.24□□□□□ -0.45
COPE-202ENST00000349893 OR2H2O95918 312 aa12.24□□□□□ -0.45
COPE-202ENST00000349893 IGKV1D-33P01593 117 aa12.24□□□□□ -0.45
COPE-202ENST00000349893 IGKV1-33P01594 117 aa12.24□□□□□ -0.45
COPE-202ENST00000349893 RPS7P62081 194 aaKnown RBP12.24□□□□□ -0.45
COPE-202ENST00000349893 AESQ08117 197 aa12.24□□□□□ -0.45
COPE-202ENST00000349893 APOFQ13790 326 aa12.24□□□□□ -0.45
COPE-202ENST00000349893 HNF4GQ14541 408 aa12.24□□□□□ -0.45
COPE-202ENST00000349893 SPATS1Q496A3 300 aa12.24□□□□□ -0.45
COPE-202ENST00000349893 ASPHD1Q5U4P2 390 aa12.24□□□□□ -0.45
COPE-202ENST00000349893 PGAM4Q8N0Y7 254 aa12.24□□□□□ -0.45
COPE-202ENST00000349893 Q8N6K4 173 aa12.24□□□□□ -0.45
COPE-202ENST00000349893 OR11H1Q8NG94 326 aa12.24□□□□□ -0.45
COPE-202ENST00000349893 HRASLS5Q96KN8 279 aa12.24□□□□□ -0.45
COPE-202ENST00000349893 LINC00574Q9H8X3 128 aa12.24□□□□□ -0.45
COPE-202ENST00000349893 HMG20AQ9NP66 347 aa12.24□□□□□ -0.45
COPE-202ENST00000349893 LIN7CQ9NUP9 197 aaKnown RBP12.24□□□□□ -0.45
COPE-202ENST00000349893 ZNF580Q9UK33 172 aa12.24□□□□□ -0.45
COPE-202ENST00000349893 IKZF2Q9UKS7 526 aa12.24□□□□□ -0.45
COPE-202ENST00000349893 SNX5Q9Y5X3 404 aa12.24□□□□□ -0.45
COPE-202ENST00000349893 ALMS1Q8TCU4 4167 aa12.23□□□□□ -0.45
COPE-202ENST00000349893 KBTBD11-OT1A0A1B0GTJ5 212 aa12.23□□□□□ -0.45
COPE-202ENST00000349893 TCRBV5S2A0A599 114 aa12.23□□□□□ -0.45
COPE-202ENST00000349893 DYNC1I1O14576 645 aa12.23□□□□□ -0.45
COPE-202ENST00000349893 GATBO75879 557 aaKnown RBP12.23□□□□□ -0.45
COPE-202ENST00000349893 INMTO95050 263 aa12.23□□□□□ -0.45
COPE-202ENST00000349893 MRPL3P09001 348 aaKnown RBP12.23□□□□□ -0.45
COPE-202ENST00000349893 OR8U8P0C7N1 319 aa12.23□□□□□ -0.45
COPE-202ENST00000349893 BCL3P20749 454 aa12.23□□□□□ -0.45
COPE-202ENST00000349893 PSMB8P28062 276 aa12.23□□□□□ -0.45
COPE-202ENST00000349893 RUNX1Q01196 453 aa12.23□□□□□ -0.45
COPE-202ENST00000349893 MADCAM1Q13477 382 aa12.23□□□□□ -0.45
COPE-202ENST00000349893 DIAPH2-AS1Q14236 149 aa12.23□□□□□ -0.45
COPE-202ENST00000349893 C16orf89Q6UX73 402 aa12.23□□□□□ -0.45
COPE-202ENST00000349893 DNAAF1Q8NEP3 725 aa12.23□□□□□ -0.45
COPE-202ENST00000349893 RNFT2Q96EX2 444 aa12.23□□□□□ -0.45
COPE-202ENST00000349893 COQ2Q96H96 371 aa12.23□□□□□ -0.45
COPE-202ENST00000349893 TTTY10Q9BZA0 68 aa12.23□□□□□ -0.45
COPE-202ENST00000349893 COMMD4Q9H0A8 199 aa12.23□□□□□ -0.45
COPE-202ENST00000349893 GTF2A1LQ9UNN4 478 aa12.23□□□□□ -0.45
COPE-202ENST00000349893 SIRPB1O00241 398 aa12.22□□□□□ -0.45
COPE-202ENST00000349893 SH2D1BO14796 132 aa12.22□□□□□ -0.45
COPE-202ENST00000349893 PRKACAP17612 351 aa12.22□□□□□ -0.45
COPE-202ENST00000349893 ATP6V1B2P21281 511 aa12.22□□□□□ -0.45
COPE-202ENST00000349893 ZNF322Q6U7Q0 402 aaPredicted RBP12.22□□□□□ -0.45
COPE-202ENST00000349893 HDXQ7Z353 690 aa12.22□□□□□ -0.45
COPE-202ENST00000349893 IZUMO1Q8IYV9 350 aa12.22□□□□□ -0.45
COPE-202ENST00000349893 Q8N9W7 124 aa12.22□□□□□ -0.45
COPE-202ENST00000349893 BORCS8Q96FH0 119 aa12.22□□□□□ -0.45
COPE-202ENST00000349893 APOL4Q9BPW4 351 aa12.22□□□□□ -0.45
COPE-202ENST00000349893 PLEKHA1Q9HB21 404 aa12.22□□□□□ -0.45
COPE-202ENST00000349893 EXOSC4Q9NPD3 245 aaKnown RBP12.22□□□□□ -0.45
COPE-202ENST00000349893 ISYNA1Q9NPH2 558 aa12.22□□□□□ -0.45
COPE-202ENST00000349893 ACTR3BQ9P1U1 418 aa12.22□□□□□ -0.45
COPE-202ENST00000349893 I3L521 148 aa12.21□□□□□ -0.45
COPE-202ENST00000349893 LDLRAD4O15165 306 aa12.21□□□□□ -0.45
COPE-202ENST00000349893 JTBO76095 146 aa12.21□□□□□ -0.45
COPE-202ENST00000349893 GP9P14770 177 aa12.21□□□□□ -0.45
COPE-202ENST00000349893 RBP2P50120 134 aa12.21□□□□□ -0.45
COPE-202ENST00000349893 ZNF816Q0VGE8 651 aaPredicted RBP12.21□□□□□ -0.45
COPE-202ENST00000349893 KIAA0141Q14154 515 aaPredicted RBP12.21□□□□□ -0.45
COPE-202ENST00000349893 CCDC54Q8NEL0 328 aa12.21□□□□□ -0.45
COPE-202ENST00000349893 HAVCR2Q8TDQ0 301 aa12.21□□□□□ -0.45
COPE-202ENST00000349893 GIPC3Q8TF64 312 aa12.21□□□□□ -0.45
COPE-202ENST00000349893 C10orf35Q96D05 121 aa12.21□□□□□ -0.45
COPE-202ENST00000349893 EAF1Q96JC9 268 aaPredicted RBP12.21□□□□□ -0.45
COPE-202ENST00000349893 PLSCR3Q9NRY6 295 aa12.21□□□□□ -0.45
COPE-202ENST00000349893 OR6C3Q9NZP0 311 aa12.21□□□□□ -0.45
COPE-202ENST00000349893 MRM2Q9UI43 246 aaKnown RBP12.21□□□□□ -0.45
COPE-202ENST00000349893 PSG11Q9UQ72 335 aa12.21□□□□□ -0.45
COPE-202ENST00000349893 TRIM64CA6NLI5 447 aa12.2□□□□□ -0.46
COPE-202ENST00000349893 A8MZ25 164 aa12.2□□□□□ -0.46
COPE-202ENST00000349893 MAGEB4O15481 346 aaPredicted RBP12.2□□□□□ -0.46
COPE-202ENST00000349893 RRP9O43818 475 aaKnown RBP12.2□□□□□ -0.46
COPE-202ENST00000349893 MPZL2O60487 215 aa12.2□□□□□ -0.46
COPE-202ENST00000349893 CYB5AP00167 134 aa12.2□□□□□ -0.46
COPE-202ENST00000349893 IGF1P05019 195 aa12.2□□□□□ -0.46
COPE-202ENST00000349893 OSMP13725 252 aa12.2□□□□□ -0.46
COPE-202ENST00000349893 SPNP16150 400 aa12.2□□□□□ -0.46
COPE-202ENST00000349893 NFYBP25208 207 aa12.2□□□□□ -0.46
COPE-202ENST00000349893 CXCR4P61073 352 aa12.2□□□□□ -0.46
COPE-202ENST00000349893 ACTR3P61158 418 aa12.2□□□□□ -0.46
COPE-202ENST00000349893 ZNF616Q08AN1 781 aa12.2□□□□□ -0.46
COPE-202ENST00000349893 KRBOX4Q5JUW0 171 aa12.2□□□□□ -0.46
COPE-202ENST00000349893 Q6P435 159 aa12.2□□□□□ -0.46
COPE-202ENST00000349893 CYP2R1Q6VVX0 501 aa12.2□□□□□ -0.46
COPE-202ENST00000349893 PLEKHG7Q6ZR37 379 aa12.2□□□□□ -0.46
COPE-202ENST00000349893 SLC16A12Q6ZSM3 486 aa12.2□□□□□ -0.46
COPE-202ENST00000349893 CHST4Q8NCG5 386 aa12.2□□□□□ -0.46
COPE-202ENST00000349893 UBE2E2Q96LR5 201 aa12.2□□□□□ -0.46
COPE-202ENST00000349893 CNN2Q99439 309 aaKnown RBP12.2□□□□□ -0.46
COPE-202ENST00000349893 MNTQ99583 582 aa12.2□□□□□ -0.46
COPE-202ENST00000349893 NCOR1P1Q9H4R4 102 aa12.2□□□□□ -0.46
COPE-202ENST00000349893 SLC25A19Q9HC21 320 aa12.2□□□□□ -0.46
COPE-202ENST00000349893 IGKV1-9A0A0C4DH69 117 aa12.19□□□□□ -0.46
COPE-202ENST00000349893 NPIPB11E5RHQ5 1161 aa12.19□□□□□ -0.46
COPE-202ENST00000349893 SLC33A1O00400 549 aaPredicted RBP12.19□□□□□ -0.46
COPE-202ENST00000349893 SYT7O43581 403 aa12.19□□□□□ -0.46
COPE-202ENST00000349893 SERPINA3P01011 423 aa12.19□□□□□ -0.46
COPE-202ENST00000349893 CALCBP10092 127 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms