RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 LRRC61Q9BV99 259 aa8.37□□□□□ -1.07
HOXA1-201ENST00000343060 ZNF160Q9HCG1 818 aa8.37□□□□□ -1.07
HOXA1-201ENST00000343060 ZNF581Q9P0T4 197 aa8.37□□□□□ -1.07
HOXA1-201ENST00000343060 PIGLQ9Y2B2 252 aa8.37□□□□□ -1.07
HOXA1-201ENST00000343060 NCOA6Q14686 2063 aaPredicted RBP8.37□□□□□ -1.07
HOXA1-201ENST00000343060 MKI67P46013 3256 aaKnown RBP8.37□□□□□ -1.07
HOXA1-201ENST00000343060 C5orf42Q9H799 3197 aa8.37□□□□□ -1.07
HOXA1-201ENST00000343060 IGLV3-32A0A0A0MS00 114 aa8.37□□□□□ -1.07
HOXA1-201ENST00000343060 LOC102725191A0A1B0GVB3 256 aa8.37□□□□□ -1.07
HOXA1-201ENST00000343060 SSSCA1O60232 199 aa8.37□□□□□ -1.07
HOXA1-201ENST00000343060 ZNF205O95201 554 aa8.37□□□□□ -1.07
HOXA1-201ENST00000343060 TMEM50AO95807 157 aa8.37□□□□□ -1.07
HOXA1-201ENST00000343060 ONECUT2O95948 504 aa8.37□□□□□ -1.07
HOXA1-201ENST00000343060 AADACP22760 399 aa8.37□□□□□ -1.07
HOXA1-201ENST00000343060 RUNX1Q01196 453 aa8.37□□□□□ -1.07
HOXA1-201ENST00000343060 RSPO1Q2MKA7 263 aaPredicted RBP8.37□□□□□ -1.07
HOXA1-201ENST00000343060 PLPPR5Q32ZL2 321 aa8.37□□□□□ -1.07
HOXA1-201ENST00000343060 C4orf17Q53FE4 359 aa8.37□□□□□ -1.07
HOXA1-201ENST00000343060 PARM1Q6UWI2 310 aa8.37□□□□□ -1.07
HOXA1-201ENST00000343060 Q6ZPA2 131 aa8.37□□□□□ -1.07
HOXA1-201ENST00000343060 PLPPR1Q8TBJ4 325 aa8.37□□□□□ -1.07
HOXA1-201ENST00000343060 MBD3L1Q8WWY6 194 aa8.37□□□□□ -1.07
HOXA1-201ENST00000343060 ZNF845Q96IR2 970 aaPredicted RBP8.37□□□□□ -1.07
HOXA1-201ENST00000343060 RPP25Q9BUL9 199 aaKnown RBP8.37□□□□□ -1.07
HOXA1-201ENST00000343060 TPSD1Q9BZJ3 242 aa8.37□□□□□ -1.07
HOXA1-201ENST00000343060 CERS4Q9HA82 394 aa8.37□□□□□ -1.07
HOXA1-201ENST00000343060 PLSCR2Q9NRY7 297 aa8.37□□□□□ -1.07
HOXA1-201ENST00000343060 SHANK1Q9Y566 2161 aa8.36□□□□□ -1.07
HOXA1-201ENST00000343060 ATXN7O15265 892 aaPredicted RBP8.36□□□□□ -1.07
HOXA1-201ENST00000343060 DFFBO76075 338 aa8.36□□□□□ -1.07
HOXA1-201ENST00000343060 PFN1P07737 140 aaKnown RBP8.36□□□□□ -1.07
HOXA1-201ENST00000343060 GLI4P10075 376 aa8.36□□□□□ -1.07
HOXA1-201ENST00000343060 NPBWR2P48146 333 aa8.36□□□□□ -1.07
HOXA1-201ENST00000343060 FBXW4P57775 412 aa8.36□□□□□ -1.07
HOXA1-201ENST00000343060 HERV-K104P61576 105 aa8.36□□□□□ -1.07
HOXA1-201ENST00000343060 VAMP2P63027 116 aa8.36□□□□□ -1.07
HOXA1-201ENST00000343060 RNF4P78317 190 aa8.36□□□□□ -1.07
HOXA1-201ENST00000343060 ENDOGQ14249 297 aaKnown RBP8.36□□□□□ -1.07
HOXA1-201ENST00000343060 MEX3BQ6ZN04 569 aaKnown RBP8.36□□□□□ -1.07
HOXA1-201ENST00000343060 SELENOHQ8IZQ5 122 aaKnown RBP8.36□□□□□ -1.07
HOXA1-201ENST00000343060 ADGRG7Q96K78 797 aa8.36□□□□□ -1.07
HOXA1-201ENST00000343060 OXGR1Q96P68 337 aa8.36□□□□□ -1.07
HOXA1-201ENST00000343060 AGMATQ9BSE5 352 aa8.36□□□□□ -1.07
HOXA1-201ENST00000343060 CABLES2Q9BTV7 478 aa8.36□□□□□ -1.07
HOXA1-201ENST00000343060 P4HTMQ9NXG6 502 aa8.36□□□□□ -1.07
HOXA1-201ENST00000343060 VAX2Q9UIW0 290 aa8.36□□□□□ -1.07
HOXA1-201ENST00000343060 WASF3Q9UPY6 502 aa8.36□□□□□ -1.07
HOXA1-201ENST00000343060 C2orf72A6NCS6 295 aa8.36□□□□□ -1.07
HOXA1-201ENST00000343060 SHISA7A6NL88 538 aa8.36□□□□□ -1.07
HOXA1-201ENST00000343060 ZNF814B7Z6K7 855 aa8.36□□□□□ -1.07
HOXA1-201ENST00000343060 SHISA8B8ZZ34 492 aa8.36□□□□□ -1.07
HOXA1-201ENST00000343060 PPYP01298 95 aa8.36□□□□□ -1.07
HOXA1-201ENST00000343060 ATXN8OSP0DMR3 200 aa8.36□□□□□ -1.07
HOXA1-201ENST00000343060 COX5BP10606 129 aa8.36□□□□□ -1.07
HOXA1-201ENST00000343060 MSR1P21757 451 aa8.36□□□□□ -1.07
HOXA1-201ENST00000343060 FBLP22087 321 aaKnown RBP8.36□□□□□ -1.07
HOXA1-201ENST00000343060 OMGP23515 440 aa8.36□□□□□ -1.07
HOXA1-201ENST00000343060 MSX1P28360 303 aa8.36□□□□□ -1.07
HOXA1-201ENST00000343060 RAB11AP62491 216 aa8.36□□□□□ -1.07
HOXA1-201ENST00000343060 COL10A1Q03692 680 aa8.36□□□□□ -1.07
HOXA1-201ENST00000343060 TNFRSF9Q07011 255 aa8.36□□□□□ -1.07
HOXA1-201ENST00000343060 PMS2P11Q13670 270 aa8.36□□□□□ -1.07
HOXA1-201ENST00000343060 RNPS1Q15287 305 aaKnown RBP8.36□□□□□ -1.07
HOXA1-201ENST00000343060 C10orf128Q5T292 105 aa8.36□□□□□ -1.07
HOXA1-201ENST00000343060 CARD17Q5XLA6 110 aa8.36□□□□□ -1.07
HOXA1-201ENST00000343060 CENPVQ7Z7K6 275 aaPredicted RBP8.36□□□□□ -1.07
HOXA1-201ENST00000343060 IL22RA1Q8N6P7 574 aa8.36□□□□□ -1.07
HOXA1-201ENST00000343060 ACY3Q96HD9 319 aa8.36□□□□□ -1.07
HOXA1-201ENST00000343060 TMEM106CQ9BVX2 250 aa8.36□□□□□ -1.07
HOXA1-201ENST00000343060 IL36GQ9NZH8 169 aa8.36□□□□□ -1.07
HOXA1-201ENST00000343060 OR14J1Q9UGF5 321 aa8.36□□□□□ -1.07
HOXA1-201ENST00000343060 DNAH14Q0VDD8 3507 aa8.35□□□□□ -1.07
HOXA1-201ENST00000343060 PIAS2O75928 621 aa8.35□□□□□ -1.07
HOXA1-201ENST00000343060 TK1P04183 234 aa8.35□□□□□ -1.07
HOXA1-201ENST00000343060 THEGLP0DJG4 465 aa8.35□□□□□ -1.07
HOXA1-201ENST00000343060 NR2C1P13056 603 aa8.35□□□□□ -1.07
HOXA1-201ENST00000343060 BLKP51451 505 aa8.35□□□□□ -1.07
HOXA1-201ENST00000343060 CCR5P51681 352 aa8.35□□□□□ -1.07
HOXA1-201ENST00000343060 USF2Q15853 346 aaPredicted RBP8.35□□□□□ -1.07
HOXA1-201ENST00000343060 CXorf66Q5JRM2 361 aaPredicted RBP8.35□□□□□ -1.07
HOXA1-201ENST00000343060 CPEB2Q7Z5Q1 589 aaKnown RBP8.35□□□□□ -1.07
HOXA1-201ENST00000343060 SUMF1Q8NBK3 374 aa8.35□□□□□ -1.07
HOXA1-201ENST00000343060 GJC3Q8NFK1 279 aa8.35□□□□□ -1.07
HOXA1-201ENST00000343060 OR2V1Q8NHB1 315 aa8.35□□□□□ -1.07
HOXA1-201ENST00000343060 DYRK2Q92630 601 aa8.35□□□□□ -1.07
HOXA1-201ENST00000343060 GNG13Q9P2W3 67 aa8.35□□□□□ -1.07
HOXA1-201ENST00000343060 RNF115Q9Y4L5 304 aa8.35□□□□□ -1.07
HOXA1-201ENST00000343060 F5P12259 2224 aa8.35□□□□□ -1.07
HOXA1-201ENST00000343060 IGKV1-27A0A075B6S5 117 aa8.35□□□□□ -1.07
HOXA1-201ENST00000343060 FAM221AA4D161 298 aa8.35□□□□□ -1.07
HOXA1-201ENST00000343060 AQP7P3A6NL99 342 aa8.35□□□□□ -1.07
HOXA1-201ENST00000343060 ADAM20O43506 726 aa8.35□□□□□ -1.07
HOXA1-201ENST00000343060 CST7O76096 145 aa8.35□□□□□ -1.07
HOXA1-201ENST00000343060 UCP1P25874 307 aa8.35□□□□□ -1.07
HOXA1-201ENST00000343060 APLNRP35414 380 aa8.35□□□□□ -1.07
HOXA1-201ENST00000343060 PAX9P55771 341 aa8.35□□□□□ -1.07
HOXA1-201ENST00000343060 TMEM240Q5SV17 173 aa8.35□□□□□ -1.07
HOXA1-201ENST00000343060 TMEM211Q6ICI0 200 aa8.35□□□□□ -1.07
HOXA1-201ENST00000343060 TMEM92Q6UXU6 159 aa8.35□□□□□ -1.07
HOXA1-201ENST00000343060 Q6ZS49 121 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms