RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 ALDOBP05062 364 aa9.83□□□□□ -0.84
SCFD1-201ENST00000311943 OR10A3P58181 314 aa9.83□□□□□ -0.84
SCFD1-201ENST00000311943 MLLT11Q13015 90 aaPredicted RBP9.83□□□□□ -0.84
SCFD1-201ENST00000311943 TBCEQ15813 527 aaPredicted RBP9.83□□□□□ -0.84
SCFD1-201ENST00000311943 PXT1Q8NFP0 134 aa9.83□□□□□ -0.84
SCFD1-201ENST00000311943 ST3GAL6Q9Y274 331 aa9.83□□□□□ -0.84
SCFD1-201ENST00000311943 MRPS28Q9Y2Q9 187 aaKnown RBP9.83□□□□□ -0.84
SCFD1-201ENST00000311943 KPTNQ9Y664 436 aa9.83□□□□□ -0.84
SCFD1-201ENST00000311943 IGHV4-59P01825 116 aa9.82□□□□□ -0.84
SCFD1-201ENST00000311943 SRMP19623 302 aa9.82□□□□□ -0.84
SCFD1-201ENST00000311943 CPT2P23786 658 aa9.82□□□□□ -0.84
SCFD1-201ENST00000311943 SAA4P35542 130 aa9.82□□□□□ -0.84
SCFD1-201ENST00000311943 TGFBR1P36897 503 aa9.82□□□□□ -0.84
SCFD1-201ENST00000311943 SLC9A3R2Q15599 337 aa9.82□□□□□ -0.84
SCFD1-201ENST00000311943 PLA1AQ53H76 456 aa9.82□□□□□ -0.84
SCFD1-201ENST00000311943 NR2C2APQ86WQ0 139 aa9.82□□□□□ -0.84
SCFD1-201ENST00000311943 SAXO1Q8IYX7 474 aa9.82□□□□□ -0.84
SCFD1-201ENST00000311943 LEAP2Q969E1 77 aa9.82□□□□□ -0.84
SCFD1-201ENST00000311943 A0A0B4J203 849 aa9.82□□□□□ -0.84
SCFD1-201ENST00000311943 SH2D1BO14796 132 aa9.82□□□□□ -0.84
SCFD1-201ENST00000311943 CD1AP06126 327 aa9.82□□□□□ -0.84
SCFD1-201ENST00000311943 UCHL1P09936 223 aa9.82□□□□□ -0.84
SCFD1-201ENST00000311943 LMO1P25800 156 aa9.82□□□□□ -0.84
SCFD1-201ENST00000311943 CALRP27797 417 aaKnown RBP9.82□□□□□ -0.84
SCFD1-201ENST00000311943 PSMB9P28065 219 aa9.82□□□□□ -0.84
SCFD1-201ENST00000311943 RAB13P51153 203 aa9.82□□□□□ -0.84
SCFD1-201ENST00000311943 P2RY14Q15391 338 aa9.82□□□□□ -0.84
SCFD1-201ENST00000311943 NEDD8Q15843 81 aa9.82□□□□□ -0.84
SCFD1-201ENST00000311943 LTC4SQ16873 150 aa9.82□□□□□ -0.84
SCFD1-201ENST00000311943 FBLN7Q53RD9 439 aa9.82□□□□□ -0.84
SCFD1-201ENST00000311943 PRAMEF5Q5TYX0 476 aa9.82□□□□□ -0.84
SCFD1-201ENST00000311943 AWAT2Q6E213 333 aa9.82□□□□□ -0.84
SCFD1-201ENST00000311943 SIGIRRQ6IA17 410 aa9.82□□□□□ -0.84
SCFD1-201ENST00000311943 OSR2Q8N2R0 312 aa9.82□□□□□ -0.84
SCFD1-201ENST00000311943 ZSCAN4Q8NAM6 433 aaPredicted RBP9.82□□□□□ -0.84
SCFD1-201ENST00000311943 NICN1Q9BSH3 213 aa9.82□□□□□ -0.84
SCFD1-201ENST00000311943 FOXJ3Q9UPW0 622 aa9.82□□□□□ -0.84
SCFD1-201ENST00000311943 OR7C1O76099 320 aaPredicted RBP9.81□□□□□ -0.84
SCFD1-201ENST00000311943 FPR2P25090 351 aa9.81□□□□□ -0.84
SCFD1-201ENST00000311943 RBM11P57052 281 aaKnown RBP9.81□□□□□ -0.84
SCFD1-201ENST00000311943 UBA52P62987 128 aaKnown RBP9.81□□□□□ -0.84
SCFD1-201ENST00000311943 BAMBIQ13145 260 aa9.81□□□□□ -0.84
SCFD1-201ENST00000311943 HSD17B12Q53GQ0 312 aa9.81□□□□□ -0.84
SCFD1-201ENST00000311943 SPIN3Q5JUX0 258 aa9.81□□□□□ -0.84
SCFD1-201ENST00000311943 HIST2H2BDQ6DRA6 164 aa9.81□□□□□ -0.84
SCFD1-201ENST00000311943 ELP2Q6IA86 826 aa9.81□□□□□ -0.84
SCFD1-201ENST00000311943 Q8IYB0 196 aa9.81□□□□□ -0.84
SCFD1-201ENST00000311943 SUMF2Q8NBJ7 301 aa9.81□□□□□ -0.84
SCFD1-201ENST00000311943 OR51T1Q8NGJ9 327 aa9.81□□□□□ -0.84
SCFD1-201ENST00000311943 OR13A1Q8NGR1 328 aa9.81□□□□□ -0.84
SCFD1-201ENST00000311943 RFESDQ8TAC1 157 aa9.81□□□□□ -0.84
SCFD1-201ENST00000311943 ZNF418Q8TF45 676 aaPredicted RBP9.81□□□□□ -0.84
SCFD1-201ENST00000311943 CHIAQ9BZP6 476 aa9.81□□□□□ -0.84
SCFD1-201ENST00000311943 FAM234AQ9H0X4 552 aa9.81□□□□□ -0.84
SCFD1-201ENST00000311943 METTL9Q9H1A3 318 aa9.81□□□□□ -0.84
SCFD1-201ENST00000311943 TCF7L1Q9HCS4 588 aa9.81□□□□□ -0.84
SCFD1-201ENST00000311943 CKLFQ9UBR5 152 aa9.81□□□□□ -0.84
SCFD1-201ENST00000311943 KIF25Q9UIL4 384 aa9.81□□□□□ -0.84
SCFD1-201ENST00000311943 MEIOCA2RUB1 952 aa9.8□□□□□ -0.84
SCFD1-201ENST00000311943 MEGF11A6BM72 1044 aa9.8□□□□□ -0.84
SCFD1-201ENST00000311943 NPFFO15130 113 aa9.8□□□□□ -0.84
SCFD1-201ENST00000311943 GPR37O15354 613 aa9.8□□□□□ -0.84
SCFD1-201ENST00000311943 PRTN3P24158 256 aa9.8□□□□□ -0.84
SCFD1-201ENST00000311943 MTNR1BP49286 362 aa9.8□□□□□ -0.84
SCFD1-201ENST00000311943 P2RX3P56373 397 aa9.8□□□□□ -0.84
SCFD1-201ENST00000311943 UNC119Q13432 240 aa9.8□□□□□ -0.84
SCFD1-201ENST00000311943 KRBOX4Q5JUW0 171 aa9.8□□□□□ -0.84
SCFD1-201ENST00000311943 ATAD3CQ5T2N8 411 aa9.8□□□□□ -0.84
SCFD1-201ENST00000311943 Q8NFD4 153 aa9.8□□□□□ -0.84
SCFD1-201ENST00000311943 CCDC107Q8WV48 283 aa9.8□□□□□ -0.84
SCFD1-201ENST00000311943 SELENOIQ9C0D9 397 aa9.8□□□□□ -0.84
SCFD1-201ENST00000311943 OR51E2Q9H255 320 aa9.8□□□□□ -0.84
SCFD1-201ENST00000311943 METTL8Q9H825 291 aaKnown RBP9.8□□□□□ -0.84
SCFD1-201ENST00000311943 TRBV23-1A0A0A0MS06 115 aa9.8□□□□□ -0.84
SCFD1-201ENST00000311943 A0A0A6YYD4 124 aa9.8□□□□□ -0.84
SCFD1-201ENST00000311943 C17orf98A8MV24 154 aa9.8□□□□□ -0.84
SCFD1-201ENST00000311943 MGST3O14880 152 aa9.8□□□□□ -0.84
SCFD1-201ENST00000311943 CRTAPO75718 401 aaPredicted RBP9.8□□□□□ -0.84
SCFD1-201ENST00000311943 CSTBP04080 98 aaKnown RBP9.8□□□□□ -0.84
SCFD1-201ENST00000311943 MELTFP08582 738 aa9.8□□□□□ -0.84
SCFD1-201ENST00000311943 ZNF728P0DKX0 622 aa9.8□□□□□ -0.84
SCFD1-201ENST00000311943 VSIG8P0DPA2 414 aa9.8□□□□□ -0.84
SCFD1-201ENST00000311943 GABARAPL2P60520 117 aa9.8□□□□□ -0.84
SCFD1-201ENST00000311943 C17orf58Q2M2W7 97 aa9.8□□□□□ -0.84
SCFD1-201ENST00000311943 PAN3Q58A45 887 aaKnown RBP9.8□□□□□ -0.84
SCFD1-201ENST00000311943 C22orf42Q6IC83 251 aa9.8□□□□□ -0.84
SCFD1-201ENST00000311943 Q6ZPA2 131 aa9.8□□□□□ -0.84
SCFD1-201ENST00000311943 ZNF367Q7RTV3 350 aa9.8□□□□□ -0.84
SCFD1-201ENST00000311943 TRAPPC6BQ86SZ2 158 aa9.8□□□□□ -0.84
SCFD1-201ENST00000311943 MS4A15Q8N5U1 240 aa9.8□□□□□ -0.84
SCFD1-201ENST00000311943 MRGPRDQ8TDS7 321 aa9.8□□□□□ -0.84
SCFD1-201ENST00000311943 SLC25A28Q96A46 364 aa9.8□□□□□ -0.84
SCFD1-201ENST00000311943 FOXRED1Q96CU9 486 aaPredicted RBP9.8□□□□□ -0.84
SCFD1-201ENST00000311943 RRP9O43818 475 aaKnown RBP9.79□□□□□ -0.84
SCFD1-201ENST00000311943 MPIG6BO95866 241 aa9.79□□□□□ -0.84
SCFD1-201ENST00000311943 IGHV1-8P0DP01 117 aa9.79□□□□□ -0.84
SCFD1-201ENST00000311943 MGMTP16455 207 aa9.79□□□□□ -0.84
SCFD1-201ENST00000311943 HTR2CP28335 458 aa9.79□□□□□ -0.84
SCFD1-201ENST00000311943 SSTR5P35346 364 aa9.79□□□□□ -0.84
SCFD1-201ENST00000311943 RELBQ01201 579 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms