RNA–Protein interactions for RNA: ENST00000293968.11

CCNF-201, Transcript of cyclin F, humanhuman

TSL 1 (best)

Gene CCNF, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-201ENST00000293968 NXPH1P58417 271 aa12.74□□□□□ -0.37
CCNF-201ENST00000293968 STARD6P59095 220 aa12.74□□□□□ -0.37
CCNF-201ENST00000293968 ERVFRD-1P60508 538 aa12.74□□□□□ -0.37
CCNF-201ENST00000293968 RSPO1Q2MKA7 263 aaPredicted RBP12.74□□□□□ -0.37
CCNF-201ENST00000293968 MPV17LQ2QL34 196 aa12.74□□□□□ -0.37
CCNF-201ENST00000293968 SNIP1Q8TAD8 396 aaKnown RBP12.74□□□□□ -0.37
CCNF-201ENST00000293968 MEGF10Q96KG7 1140 aa12.74□□□□□ -0.37
CCNF-201ENST00000293968 ARV1Q9H2C2 271 aa12.74□□□□□ -0.37
CCNF-201ENST00000293968 IGKV1-12A0A0C4DH73 117 aa12.74□□□□□ -0.37
CCNF-201ENST00000293968 YKT6O15498 198 aa12.74□□□□□ -0.37
CCNF-201ENST00000293968 CHST1O43916 411 aa12.74□□□□□ -0.37
CCNF-201ENST00000293968 IGKV1D-12P01611 117 aa12.74□□□□□ -0.37
CCNF-201ENST00000293968 IGFBP4P22692 258 aa12.74□□□□□ -0.37
CCNF-201ENST00000293968 TLE4Q04727 773 aa12.74□□□□□ -0.37
CCNF-201ENST00000293968 USF2Q15853 346 aaPredicted RBP12.74□□□□□ -0.37
CCNF-201ENST00000293968 IZUMO4Q1ZYL8 232 aa12.74□□□□□ -0.37
CCNF-201ENST00000293968 SYT13Q7L8C5 426 aa12.74□□□□□ -0.37
CCNF-201ENST00000293968 SSX9Q7RTT3 188 aa12.74□□□□□ -0.37
CCNF-201ENST00000293968 GAPTQ8N292 157 aa12.74□□□□□ -0.37
CCNF-201ENST00000293968 PRR18Q8N4B5 295 aa12.74□□□□□ -0.37
CCNF-201ENST00000293968 TMEM171Q8WVE6 324 aa12.74□□□□□ -0.37
CCNF-201ENST00000293968 CHRNA10Q9GZZ6 450 aa12.74□□□□□ -0.37
CCNF-201ENST00000293968 C19orf25Q9UFG5 118 aaPredicted RBP12.74□□□□□ -0.37
CCNF-201ENST00000293968 PPIHO43447 177 aaKnown RBP12.73□□□□□ -0.37
CCNF-201ENST00000293968 TRAPPC6AO75865 159 aa12.73□□□□□ -0.37
CCNF-201ENST00000293968 SLC34A2O95436 690 aa12.73□□□□□ -0.37
CCNF-201ENST00000293968 ALDH3B1P43353 468 aa12.73□□□□□ -0.37
CCNF-201ENST00000293968 NTNG2Q96CW9 530 aa12.73□□□□□ -0.37
CCNF-201ENST00000293968 TMEM131Q92545 1883 aa12.73□□□□□ -0.37
CCNF-201ENST00000293968 TRDCB7Z8K6 153 aa12.73□□□□□ -0.37
CCNF-201ENST00000293968 PDCD6O75340 191 aa12.73□□□□□ -0.37
CCNF-201ENST00000293968 SCAF4O95104 1147 aaKnown RBP12.73□□□□□ -0.37
CCNF-201ENST00000293968 SRP19P09132 144 aaKnown RBP12.73□□□□□ -0.37
CCNF-201ENST00000293968 KCNMB1Q16558 191 aa12.73□□□□□ -0.37
CCNF-201ENST00000293968 HIKESHIQ53FT3 197 aa12.73□□□□□ -0.37
CCNF-201ENST00000293968 LHFPL2Q6ZUX7 228 aa12.73□□□□□ -0.37
CCNF-201ENST00000293968 YRDCQ86U90 279 aaKnown RBP12.73□□□□□ -0.37
CCNF-201ENST00000293968 SLC25A45Q8N413 288 aa12.73□□□□□ -0.37
CCNF-201ENST00000293968 NECAP1Q8NC96 275 aa12.73□□□□□ -0.37
CCNF-201ENST00000293968 OR1F12Q8NHA8 337 aa12.73□□□□□ -0.37
CCNF-201ENST00000293968 HPSE2Q8WWQ2 592 aa12.73□□□□□ -0.37
CCNF-201ENST00000293968 MOB3AQ96BX8 217 aa12.73□□□□□ -0.37
CCNF-201ENST00000293968 TERTO14746 1132 aaKnown RBP12.73□□□□□ -0.37
CCNF-201ENST00000293968 ELOBQ15370 118 aa12.73□□□□□ -0.37
CCNF-201ENST00000293968 HIST2H3PS2Q5TEC6 136 aa12.73□□□□□ -0.37
CCNF-201ENST00000293968 SCGB1C1Q8TD33 95 aa12.73□□□□□ -0.37
CCNF-201ENST00000293968 IL1F10Q8WWZ1 152 aa12.73□□□□□ -0.37
CCNF-201ENST00000293968 GATCO43716 136 aaKnown RBP12.73□□□□□ -0.37
CCNF-201ENST00000293968 NPBWR2P48146 333 aa12.73□□□□□ -0.37
CCNF-201ENST00000293968 ADPRHL1Q8NDY3 354 aa12.73□□□□□ -0.37
CCNF-201ENST00000293968 EXTL1Q92935 676 aa12.73□□□□□ -0.37
CCNF-201ENST00000293968 FAM210BQ96KR6 192 aa12.73□□□□□ -0.37
CCNF-201ENST00000293968 SNX22Q96L94 193 aa12.73□□□□□ -0.37
CCNF-201ENST00000293968 GLRX2Q9NS18 164 aa12.73□□□□□ -0.37
CCNF-201ENST00000293968 HS3ST3B1Q9Y662 390 aa12.73□□□□□ -0.37
CCNF-201ENST00000293968 CPAMD8Q8IZJ3 1885 aa12.72□□□□□ -0.37
CCNF-201ENST00000293968 RABEPKQ7Z6M1 372 aa12.72□□□□□ -0.37
CCNF-201ENST00000293968 ZNF611Q8N823 705 aa12.72□□□□□ -0.37
CCNF-201ENST00000293968 KIAA1456Q9P272 454 aa12.72□□□□□ -0.37
CCNF-201ENST00000293968 ZNF729A6NN14 1252 aaPredicted RBP12.72□□□□□ -0.37
CCNF-201ENST00000293968 GDF9O60383 454 aa12.72□□□□□ -0.37
CCNF-201ENST00000293968 HIST1H2BKO60814 126 aa12.72□□□□□ -0.37
CCNF-201ENST00000293968 CA11O75493 328 aa12.72□□□□□ -0.37
CCNF-201ENST00000293968 F10P00742 488 aa12.72□□□□□ -0.37
CCNF-201ENST00000293968 HIST1H2BJP06899 126 aa12.72□□□□□ -0.37
CCNF-201ENST00000293968 CCL3P10147 92 aa12.72□□□□□ -0.37
CCNF-201ENST00000293968 FUT3P21217 361 aa12.72□□□□□ -0.37
CCNF-201ENST00000293968 HIST1H2BOP23527 126 aa12.72□□□□□ -0.37
CCNF-201ENST00000293968 HIST1H2BBP33778 126 aa12.72□□□□□ -0.37
CCNF-201ENST00000293968 HIST1H2BDP58876 126 aa12.72□□□□□ -0.37
CCNF-201ENST00000293968 HIST1H2BCP62807 126 aa12.72□□□□□ -0.37
CCNF-201ENST00000293968 HIST2H2BEQ16778 126 aa12.72□□□□□ -0.37
CCNF-201ENST00000293968 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.72□□□□□ -0.37
CCNF-201ENST00000293968 C17orf82Q86X59 251 aaPredicted RBP12.72□□□□□ -0.37
CCNF-201ENST00000293968 HIST1H2BHQ93079 126 aa12.72□□□□□ -0.37
CCNF-201ENST00000293968 HIST1H2BNQ99877 126 aa12.72□□□□□ -0.37
CCNF-201ENST00000293968 HIST1H2BMQ99879 126 aa12.72□□□□□ -0.37
CCNF-201ENST00000293968 CCL28Q9NRJ3 127 aa12.72□□□□□ -0.37
CCNF-201ENST00000293968 LRP4O75096 1905 aa12.72□□□□□ -0.37
CCNF-201ENST00000293968 CNOT4O95628 575 aaKnown RBP12.72□□□□□ -0.37
CCNF-201ENST00000293968 IAPPP10997 89 aa12.72□□□□□ -0.37
CCNF-201ENST00000293968 CD200P41217 278 aa12.72□□□□□ -0.37
CCNF-201ENST00000293968 GAMTQ14353 236 aa12.72□□□□□ -0.37
CCNF-201ENST00000293968 ZNF880Q6PDB4 577 aa12.72□□□□□ -0.37
CCNF-201ENST00000293968 ZNF100Q8IYN0 542 aa12.72□□□□□ -0.37
CCNF-201ENST00000293968 TMEM222Q9H0R3 208 aa12.72□□□□□ -0.37
CCNF-201ENST00000293968 TREM2Q9NZC2 230 aa12.72□□□□□ -0.37
CCNF-201ENST00000293968 PITX3O75364 302 aa12.71□□□□□ -0.37
CCNF-201ENST00000293968 IGLV3-19P01714 112 aa12.71□□□□□ -0.37
CCNF-201ENST00000293968 SCTP09683 121 aa12.71□□□□□ -0.37
CCNF-201ENST00000293968 PMELP40967 661 aa12.71□□□□□ -0.37
CCNF-201ENST00000293968 ELLP55199 621 aaPredicted RBP12.71□□□□□ -0.37
CCNF-201ENST00000293968 ZNF92Q03936 586 aa12.71□□□□□ -0.37
CCNF-201ENST00000293968 KDF1Q8NAX2 398 aaPredicted RBP12.71□□□□□ -0.37
CCNF-201ENST00000293968 OR5T1Q8NG75 326 aa12.71□□□□□ -0.37
CCNF-201ENST00000293968 GNPNAT1Q96EK6 184 aaPredicted RBP12.71□□□□□ -0.37
CCNF-201ENST00000293968 HSF4Q9ULV5 492 aa12.71□□□□□ -0.37
CCNF-201ENST00000293968 A0A1B0GV90 55 aa12.71□□□□□ -0.37
CCNF-201ENST00000293968 SEC14L6B5MCN3 397 aa12.71□□□□□ -0.37
CCNF-201ENST00000293968 PROB1E7EW31 1015 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms