RNA–Protein interactions for RNA: ENST00000265304.10

SSBP1-201, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-201ENST00000265304 GZMKP49863 264 aa11.83□□□□□ -0.52
SSBP1-201ENST00000265304 GMFBP60983 142 aa11.83□□□□□ -0.52
SSBP1-201ENST00000265304 SEC61A1P61619 476 aaKnown RBP11.83□□□□□ -0.52
SSBP1-201ENST00000265304 TAF9Q16594 264 aa11.83□□□□□ -0.52
SSBP1-201ENST00000265304 DUX4L9Q6RFH8 374 aaPredicted RBP11.83□□□□□ -0.52
SSBP1-201ENST00000265304 BIVMQ86UB2 503 aa11.83□□□□□ -0.52
SSBP1-201ENST00000265304 FAM216BQ8N7L0 139 aa11.83□□□□□ -0.52
SSBP1-201ENST00000265304 ZNRF1Q8ND25 227 aa11.83□□□□□ -0.52
SSBP1-201ENST00000265304 C18orf12Q96KH6 178 aa11.83□□□□□ -0.52
SSBP1-201ENST00000265304 URM1Q9BTM9 101 aaKnown RBP11.83□□□□□ -0.52
SSBP1-201ENST00000265304 SSBP3Q9BWW4 388 aaPredicted RBP11.83□□□□□ -0.52
SSBP1-201ENST00000265304 SELENOIQ9C0D9 397 aa11.83□□□□□ -0.52
SSBP1-201ENST00000265304 ABCG5Q9H222 651 aa11.83□□□□□ -0.52
SSBP1-201ENST00000265304 BANF2Q9H503 90 aa11.83□□□□□ -0.52
SSBP1-201ENST00000265304 DUX4Q9UBX2 424 aa11.83□□□□□ -0.52
SSBP1-201ENST00000265304 CLN8Q9UBY8 286 aa11.83□□□□□ -0.52
SSBP1-201ENST00000265304 RSL24D1Q9UHA3 163 aaKnown RBP11.83□□□□□ -0.52
SSBP1-201ENST00000265304 HSF4Q9ULV5 492 aa11.83□□□□□ -0.52
SSBP1-201ENST00000265304 MXRA5Q9NR99 2828 aa11.83□□□□□ -0.52
SSBP1-201ENST00000265304 TRBV23-1A0A0A0MS06 115 aa11.82□□□□□ -0.52
SSBP1-201ENST00000265304 A0A0A6YYD4 124 aa11.82□□□□□ -0.52
SSBP1-201ENST00000265304 SMIM30A4D0T7 59 aa11.82□□□□□ -0.52
SSBP1-201ENST00000265304 POM121CA8CG34 1229 aa11.82□□□□□ -0.52
SSBP1-201ENST00000265304 MGST3O14880 152 aa11.82□□□□□ -0.52
SSBP1-201ENST00000265304 NDUFB3O43676 98 aa11.82□□□□□ -0.52
SSBP1-201ENST00000265304 MPIG6BO95866 241 aa11.82□□□□□ -0.52
SSBP1-201ENST00000265304 FUT3P21217 361 aa11.82□□□□□ -0.52
SSBP1-201ENST00000265304 CHATP28329 748 aa11.82□□□□□ -0.52
SSBP1-201ENST00000265304 GABRA2P47869 451 aa11.82□□□□□ -0.52
SSBP1-201ENST00000265304 OR3A1P47881 315 aa11.82□□□□□ -0.52
SSBP1-201ENST00000265304 CEBPDP49716 269 aaPredicted RBP11.82□□□□□ -0.52
SSBP1-201ENST00000265304 TMEM50BP56557 158 aa11.82□□□□□ -0.52
SSBP1-201ENST00000265304 PLA2G7Q13093 441 aa11.82□□□□□ -0.52
SSBP1-201ENST00000265304 CR1LQ2VPA4 569 aa11.82□□□□□ -0.52
SSBP1-201ENST00000265304 ESCO2Q56NI9 601 aa11.82□□□□□ -0.52
SSBP1-201ENST00000265304 LRRC10Q5BKY1 277 aa11.82□□□□□ -0.52
SSBP1-201ENST00000265304 CD276Q5ZPR3 534 aa11.82□□□□□ -0.52
SSBP1-201ENST00000265304 BATF2Q8N1L9 274 aa11.82□□□□□ -0.52
SSBP1-201ENST00000265304 LINC01356Q8N9X3 169 aa11.82□□□□□ -0.52
SSBP1-201ENST00000265304 MSI2Q96DH6 328 aaKnown RBP11.82□□□□□ -0.52
SSBP1-201ENST00000265304 NXF2Q9GZY0 626 aaKnown RBP11.82□□□□□ -0.52
SSBP1-201ENST00000265304 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.82□□□□□ -0.52
SSBP1-201ENST00000265304 BATF3Q9NR55 127 aa11.82□□□□□ -0.52
SSBP1-201ENST00000265304 CCDC59Q9P031 241 aaKnown RBP11.82□□□□□ -0.52
SSBP1-201ENST00000265304 SLC25A10Q9UBX3 287 aaPredicted RBP11.82□□□□□ -0.52
SSBP1-201ENST00000265304 OR14J1Q9UGF5 321 aa11.82□□□□□ -0.52
SSBP1-201ENST00000265304 A0A075B6Q4 140 aa11.81□□□□□ -0.52
SSBP1-201ENST00000265304 A0A0A6YYH2 397 aa11.81□□□□□ -0.52
SSBP1-201ENST00000265304 A0A0B4J203 849 aa11.81□□□□□ -0.52
SSBP1-201ENST00000265304 TRAV20A0A0B4J274 112 aa11.81□□□□□ -0.52
SSBP1-201ENST00000265304 KIR2DS1A0A191URI9 304 aa11.81□□□□□ -0.52
SSBP1-201ENST00000265304 A6NJ64 397 aa11.81□□□□□ -0.52
SSBP1-201ENST00000265304 PDCD6O75340 191 aa11.81□□□□□ -0.52
SSBP1-201ENST00000265304 CA11O75493 328 aa11.81□□□□□ -0.52
SSBP1-201ENST00000265304 PAHP00439 452 aa11.81□□□□□ -0.52
SSBP1-201ENST00000265304 TFF1P04155 84 aa11.81□□□□□ -0.52
SSBP1-201ENST00000265304 LIPFP07098 398 aa11.81□□□□□ -0.52
SSBP1-201ENST00000265304 SELLP14151 372 aa11.81□□□□□ -0.52
SSBP1-201ENST00000265304 SNRPBP14678 240 aaKnown RBP11.81□□□□□ -0.52
SSBP1-201ENST00000265304 GATA3P23771 443 aa11.81□□□□□ -0.52
SSBP1-201ENST00000265304 EFNB2P52799 333 aa11.81□□□□□ -0.52
SSBP1-201ENST00000265304 MEF2CQ06413 473 aaPredicted RBP11.81□□□□□ -0.52
SSBP1-201ENST00000265304 IDNKQ5T6J7 187 aa11.81□□□□□ -0.52
SSBP1-201ENST00000265304 FOXB2Q5VYV0 432 aa11.81□□□□□ -0.52
SSBP1-201ENST00000265304 C1orf122Q6ZSJ8 110 aa11.81□□□□□ -0.52
SSBP1-201ENST00000265304 OR4S1Q8NGB4 309 aa11.81□□□□□ -0.52
SSBP1-201ENST00000265304 OR5H6Q8NGV6 325 aa11.81□□□□□ -0.52
SSBP1-201ENST00000265304 PPP1R35Q8TAP8 253 aa11.81□□□□□ -0.52
SSBP1-201ENST00000265304 LGALS14Q8TCE9 139 aa11.81□□□□□ -0.52
SSBP1-201ENST00000265304 SLC25A38Q96DW6 304 aa11.81□□□□□ -0.52
SSBP1-201ENST00000265304 DCTN5Q9BTE1 182 aa11.81□□□□□ -0.52
SSBP1-201ENST00000265304 SLIRPQ9GZT3 109 aaKnown RBP11.81□□□□□ -0.52
SSBP1-201ENST00000265304 KCNK15Q9H427 330 aa11.81□□□□□ -0.52
SSBP1-201ENST00000265304 NARFLQ9H6Q4 476 aa11.81□□□□□ -0.52
SSBP1-201ENST00000265304 ZNF581Q9P0T4 197 aa11.81□□□□□ -0.52
SSBP1-201ENST00000265304 A3GALT2U3KPV4 340 aa11.81□□□□□ -0.52
SSBP1-201ENST00000265304 METTL21EPA6NDL7 271 aa11.8□□□□□ -0.52
SSBP1-201ENST00000265304 SCGNO76038 276 aa11.8□□□□□ -0.52
SSBP1-201ENST00000265304 OR7C1O76099 320 aaPredicted RBP11.8□□□□□ -0.52
SSBP1-201ENST00000265304 MSMBP08118 114 aa11.8□□□□□ -0.52
SSBP1-201ENST00000265304 INHBBP09529 407 aa11.8□□□□□ -0.52
SSBP1-201ENST00000265304 DVL1P1P54792 670 aaPredicted RBP11.8□□□□□ -0.52
SSBP1-201ENST00000265304 GNB2P62879 340 aa11.8□□□□□ -0.52
SSBP1-201ENST00000265304 IKZF1Q13422 519 aa11.8□□□□□ -0.52
SSBP1-201ENST00000265304 CYB5R2Q6BCY4 276 aa11.8□□□□□ -0.52
SSBP1-201ENST00000265304 RAB12Q6IQ22 244 aa11.8□□□□□ -0.52
SSBP1-201ENST00000265304 SUMF2Q8NBJ7 301 aa11.8□□□□□ -0.52
SSBP1-201ENST00000265304 OR56B1Q8NGI3 324 aa11.8□□□□□ -0.52
SSBP1-201ENST00000265304 RAB40AQ8WXH6 277 aa11.8□□□□□ -0.52
SSBP1-201ENST00000265304 CORO2AQ92828 525 aa11.8□□□□□ -0.52
SSBP1-201ENST00000265304 FAM46BQ96A09 425 aa11.8□□□□□ -0.52
SSBP1-201ENST00000265304 NICN1Q9BSH3 213 aa11.8□□□□□ -0.52
SSBP1-201ENST00000265304 DPCDQ9BVM2 203 aaPredicted RBP11.8□□□□□ -0.52
SSBP1-201ENST00000265304 LINC00574Q9H8X3 128 aa11.8□□□□□ -0.52
SSBP1-201ENST00000265304 RHBDL2Q9NX52 303 aa11.8□□□□□ -0.52
SSBP1-201ENST00000265304 RPUSD1Q9UJJ7 312 aaKnown RBP11.8□□□□□ -0.52
SSBP1-201ENST00000265304 C22orf46C9J442 243 aa11.79□□□□□ -0.52
SSBP1-201ENST00000265304 SOCS1O15524 211 aa11.79□□□□□ -0.52
SSBP1-201ENST00000265304 PHF1O43189 567 aaPredicted RBP11.79□□□□□ -0.52
SSBP1-201ENST00000265304 NOL3O60936 208 aaKnown RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms