RNA–Protein interactions for RNA: ENST00000262570.9

CHCHD3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD3, Length 1,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-201ENST00000262570 LPAR2Q9HBW0 351 aa13.78□□□□□ -0.2
CHCHD3-201ENST00000262570 RAB22AQ9UL26 194 aa13.78□□□□□ -0.2
CHCHD3-201ENST00000262570 SVEP1Q4LDE5 3571 aa13.77□□□□□ -0.2
CHCHD3-201ENST00000262570 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.77□□□□□ -0.25e-6■■■■□ 22.8
CHCHD3-201ENST00000262570 NDUFB7P17568 137 aa13.77□□□□□ -0.21
CHCHD3-201ENST00000262570 OR3A1P47881 315 aa13.77□□□□□ -0.21
CHCHD3-201ENST00000262570 PAX2Q02962 417 aa13.77□□□□□ -0.21
CHCHD3-201ENST00000262570 CD276Q5ZPR3 534 aa13.77□□□□□ -0.21
CHCHD3-201ENST00000262570 SIGIRRQ6IA17 410 aa13.77□□□□□ -0.21
CHCHD3-201ENST00000262570 BTN2A1Q7KYR7 527 aa13.77□□□□□ -0.21
CHCHD3-201ENST00000262570 FAM89BQ8N5H3 189 aa13.77□□□□□ -0.21
CHCHD3-201ENST00000262570 OR4S1Q8NGB4 309 aa13.77□□□□□ -0.21
CHCHD3-201ENST00000262570 PPP1R35Q8TAP8 253 aa13.77□□□□□ -0.21
CHCHD3-201ENST00000262570 NICN1Q9BSH3 213 aa13.77□□□□□ -0.21
CHCHD3-201ENST00000262570 URM1Q9BTM9 101 aaKnown RBP13.77□□□□□ -0.21
CHCHD3-201ENST00000262570 CHST6Q9GZX3 395 aa13.77□□□□□ -0.21
CHCHD3-201ENST00000262570 RCC2Q9P258 522 aaKnown RBP13.77□□□□□ -0.21
CHCHD3-201ENST00000262570 DOCK11Q5JSL3 2073 aa13.77□□□□□ -0.21
CHCHD3-201ENST00000262570 F8P00451 2351 aa13.76□□□□□ -0.21
CHCHD3-201ENST00000262570 LOC105371242A0A075B767 164 aa13.76□□□□□ -0.21
CHCHD3-201ENST00000262570 A0A0A6YYD4 124 aa13.76□□□□□ -0.21
CHCHD3-201ENST00000262570 PPIAL4CA0A0B4J2A2 164 aa13.76□□□□□ -0.21
CHCHD3-201ENST00000262570 SMIM31A0A1B0GVY4 71 aa13.76□□□□□ -0.21
CHCHD3-201ENST00000262570 DPPA5A6NC42 116 aa13.76□□□□□ -0.21
CHCHD3-201ENST00000262570 CCDC160A6NGH7 325 aa13.76□□□□□ -0.21
CHCHD3-201ENST00000262570 C22orf46C9J442 243 aa13.76□□□□□ -0.21
CHCHD3-201ENST00000262570 ZNF701M0R085 212 aaPredicted RBP13.76□□□□□ -0.21
CHCHD3-201ENST00000262570 ECDO95905 644 aaPredicted RBP13.76□□□□□ -0.21
CHCHD3-201ENST00000262570 TGFAP01135 160 aa13.76□□□□□ -0.21
CHCHD3-201ENST00000262570 CSN2P05814 226 aa13.76□□□□□ -0.21
CHCHD3-201ENST00000262570 RAB6AP20340 208 aa13.76□□□□□ -0.21
CHCHD3-201ENST00000262570 RORCP51449 518 aa13.76□□□□□ -0.21
CHCHD3-201ENST00000262570 EFNB2P52799 333 aa13.76□□□□□ -0.21
CHCHD3-201ENST00000262570 GRK1Q15835 563 aa13.76□□□□□ -0.21
CHCHD3-201ENST00000262570 SUMF2Q8NBJ7 301 aa13.76□□□□□ -0.21
CHCHD3-201ENST00000262570 LGALS14Q8TCE9 139 aa13.76□□□□□ -0.21
CHCHD3-201ENST00000262570 DACT3Q96B18 629 aaPredicted RBP13.76□□□□□ -0.21
CHCHD3-201ENST00000262570 DCTN5Q9BTE1 182 aa13.76□□□□□ -0.21
CHCHD3-201ENST00000262570 SPACA1Q9HBV2 294 aa13.76□□□□□ -0.21
CHCHD3-201ENST00000262570 MMP26Q9NRE1 261 aa13.76□□□□□ -0.21
CHCHD3-201ENST00000262570 ABRACLQ9P1F3 81 aa13.76□□□□□ -0.21
CHCHD3-201ENST00000262570 RSL24D1Q9UHA3 163 aaKnown RBP13.76□□□□□ -0.21
CHCHD3-201ENST00000262570 TLN2Q9Y4G6 2542 aa13.76□□□□□ -0.21
CHCHD3-201ENST00000262570 MGST3O14880 152 aa13.75□□□□□ -0.21
CHCHD3-201ENST00000262570 PAN3Q58A45 887 aaKnown RBP13.75□□□□□ -0.21
CHCHD3-201ENST00000262570 ATAD3CQ5T2N8 411 aa13.75□□□□□ -0.21
CHCHD3-201ENST00000262570 BPIFB2Q8N4F0 458 aa13.75□□□□□ -0.21
CHCHD3-201ENST00000262570 OR5H6Q8NGV6 325 aa13.75□□□□□ -0.21
CHCHD3-201ENST00000262570 RAB40AQ8WXH6 277 aa13.75□□□□□ -0.21
CHCHD3-201ENST00000262570 TMEM186Q96B77 213 aa13.75□□□□□ -0.21
CHCHD3-201ENST00000262570 KCTD12Q96CX2 325 aaKnown RBP13.75□□□□□ -0.21
CHCHD3-201ENST00000262570 SMR3AQ99954 134 aa13.75□□□□□ -0.21
CHCHD3-201ENST00000262570 DPCDQ9BVM2 203 aaPredicted RBP13.75□□□□□ -0.21
CHCHD3-201ENST00000262570 PPA2Q9H2U2 334 aa13.75□□□□□ -0.21
CHCHD3-201ENST00000262570 NDUFA13Q9P0J0 144 aa13.75□□□□□ -0.21
CHCHD3-201ENST00000262570 RPUSD1Q9UJJ7 312 aaKnown RBP13.75□□□□□ -0.21
CHCHD3-201ENST00000262570 SPATA2Q9UM82 520 aa13.75□□□□□ -0.21
CHCHD3-201ENST00000262570 ARHGAP32A7KAX9 2087 aa13.75□□□□□ -0.21
CHCHD3-201ENST00000262570 TRAV20A0A0B4J274 112 aa13.75□□□□□ -0.21
CHCHD3-201ENST00000262570 H3BUI4 141 aa13.75□□□□□ -0.21
CHCHD3-201ENST00000262570 HSPB6O14558 160 aa13.75□□□□□ -0.21
CHCHD3-201ENST00000262570 CD5LO43866 347 aa13.75□□□□□ -0.21
CHCHD3-201ENST00000262570 ZNF16P17020 682 aaPredicted RBP13.75□□□□□ -0.21
CHCHD3-201ENST00000262570 FUT3P21217 361 aa13.75□□□□□ -0.21
CHCHD3-201ENST00000262570 FAM189A2Q15884 450 aa13.75□□□□□ -0.21
CHCHD3-201ENST00000262570 BRICD5Q6PL45 260 aa13.75□□□□□ -0.21
CHCHD3-201ENST00000262570 GDPD3Q7L5L3 318 aa13.75□□□□□ -0.21
CHCHD3-201ENST00000262570 BIVMQ86UB2 503 aa13.75□□□□□ -0.21
CHCHD3-201ENST00000262570 DYNC2LI1Q8TCX1 351 aa13.75□□□□□ -0.21
CHCHD3-201ENST00000262570 H1FXQ92522 213 aaKnown RBP13.75□□□□□ -0.21
CHCHD3-201ENST00000262570 HIF1ANQ9NWT6 349 aa13.75□□□□□ -0.21
CHCHD3-201ENST00000262570 PEX16Q9Y5Y5 336 aa13.75□□□□□ -0.21
CHCHD3-201ENST00000262570 ETV7Q9Y603 341 aa13.75□□□□□ -0.21
CHCHD3-201ENST00000262570 TRBV23-1A0A0A0MS06 115 aa13.74□□□□□ -0.21
CHCHD3-201ENST00000262570 IGHV2-70DA0A0C4DH43 119 aa13.74□□□□□ -0.21
CHCHD3-201ENST00000262570 KIR2DS1A0A191URI9 304 aa13.74□□□□□ -0.21
CHCHD3-201ENST00000262570 FOXI3A8MTJ6 420 aaPredicted RBP13.74□□□□□ -0.21
CHCHD3-201ENST00000262570 PDCD6O75340 191 aa13.74□□□□□ -0.21
CHCHD3-201ENST00000262570 GLAP06280 429 aa13.74□□□□□ -0.21
CHCHD3-201ENST00000262570 ZNF182P17025 639 aaPredicted RBP13.74□□□□□ -0.21
CHCHD3-201ENST00000262570 ERP29P30040 261 aaKnown RBP13.74□□□□□ -0.21
CHCHD3-201ENST00000262570 KCNJ3P48549 501 aa13.74□□□□□ -0.21
CHCHD3-201ENST00000262570 VEGFCP49767 419 aa13.74□□□□□ -0.21
CHCHD3-201ENST00000262570 DVL1P1P54792 670 aaPredicted RBP13.74□□□□□ -0.21
CHCHD3-201ENST00000262570 RAB12Q6IQ22 244 aa13.74□□□□□ -0.21
CHCHD3-201ENST00000262570 GLCCI1Q86VQ1 547 aa13.74□□□□□ -0.21
CHCHD3-201ENST00000262570 LY6G5BQ8NDX9 201 aa13.74□□□□□ -0.21
CHCHD3-201ENST00000262570 OR56B1Q8NGI3 324 aa13.74□□□□□ -0.21
CHCHD3-201ENST00000262570 C8orf46Q8TAG6 207 aa13.74□□□□□ -0.21
CHCHD3-201ENST00000262570 METTL21EPA6NDL7 271 aa13.73□□□□□ -0.21
CHCHD3-201ENST00000262570 SOCS1O15524 211 aa13.73□□□□□ -0.21
CHCHD3-201ENST00000262570 CHATP28329 748 aa13.73□□□□□ -0.21
CHCHD3-201ENST00000262570 BLVRBP30043 206 aaPredicted RBP13.73□□□□□ -0.21
CHCHD3-201ENST00000262570 TMEM50BP56557 158 aa13.73□□□□□ -0.21
CHCHD3-201ENST00000262570 EDDM3BP56851 147 aa13.73□□□□□ -0.21
CHCHD3-201ENST00000262570 RPL31P62899 125 aaKnown RBP13.73□□□□□ -0.21
CHCHD3-201ENST00000262570 PAX5Q02548 391 aa13.73□□□□□ -0.21
CHCHD3-201ENST00000262570 AESQ08117 197 aa13.73□□□□□ -0.21
CHCHD3-201ENST00000262570 DYNC1I2Q13409 638 aaKnown RBP13.73□□□□□ -0.21
CHCHD3-201ENST00000262570 EDDM3AQ14507 147 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms