RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 LRRTM1Q86UE6 522 aa11.22□□□□□ -0.61
VEGFA-201ENST00000230480 ANKRD13BQ86YJ7 626 aa11.22□□□□□ -0.61
VEGFA-201ENST00000230480 PDZD9Q8IXQ8 264 aa11.22□□□□□ -0.61
VEGFA-201ENST00000230480 TPRX1Q8N7U7 411 aa11.22□□□□□ -0.61
VEGFA-201ENST00000230480 OR51T1Q8NGJ9 327 aa11.22□□□□□ -0.61
VEGFA-201ENST00000230480 CHAC2Q8WUX2 184 aa11.22□□□□□ -0.61
VEGFA-201ENST00000230480 LHX4Q969G2 390 aa11.22□□□□□ -0.61
VEGFA-201ENST00000230480 COQ2Q96H96 371 aa11.22□□□□□ -0.61
VEGFA-201ENST00000230480 SNX22Q96L94 193 aa11.22□□□□□ -0.61
VEGFA-201ENST00000230480 NOX4Q9NPH5 578 aa11.22□□□□□ -0.61
VEGFA-201ENST00000230480 TMEM138Q9NPI0 162 aa11.22□□□□□ -0.61
VEGFA-201ENST00000230480 SCN3BQ9NY72 215 aa11.22□□□□□ -0.61
VEGFA-201ENST00000230480 TPRKBQ9Y3C4 175 aa11.22□□□□□ -0.61
VEGFA-201ENST00000230480 TRBV23-1A0A0A0MS06 115 aa11.21□□□□□ -0.61
VEGFA-201ENST00000230480 TRAV24A0A0B4J272 114 aa11.21□□□□□ -0.61
VEGFA-201ENST00000230480 C17orf98A8MV24 154 aa11.21□□□□□ -0.61
VEGFA-201ENST00000230480 RGS10O43665 173 aa11.21□□□□□ -0.61
VEGFA-201ENST00000230480 MMP23AO75900 390 aa11.21□□□□□ -0.61
VEGFA-201ENST00000230480 HCKP08631 526 aa11.21□□□□□ -0.61
VEGFA-201ENST00000230480 CGB3P0DN86 165 aa11.21□□□□□ -0.61
VEGFA-201ENST00000230480 CGB7P0DN87 165 aa11.21□□□□□ -0.61
VEGFA-201ENST00000230480 TMEM225BP0DP42 221 aa11.21□□□□□ -0.61
VEGFA-201ENST00000230480 PRTN3P24158 256 aa11.21□□□□□ -0.61
VEGFA-201ENST00000230480 BDKRB2P30411 391 aa11.21□□□□□ -0.61
VEGFA-201ENST00000230480 PTGFRP43088 359 aa11.21□□□□□ -0.61
VEGFA-201ENST00000230480 TAS2R43P59537 309 aa11.21□□□□□ -0.61
VEGFA-201ENST00000230480 RPS25P62851 125 aaKnown RBP11.21□□□□□ -0.61
VEGFA-201ENST00000230480 ACSM3Q53FZ2 586 aa11.21□□□□□ -0.61
VEGFA-201ENST00000230480 OR8H2Q8N162 312 aa11.21□□□□□ -0.61
VEGFA-201ENST00000230480 OR4D6Q8NGJ1 314 aa11.21□□□□□ -0.61
VEGFA-201ENST00000230480 DUX5Q96PT3 197 aa11.21□□□□□ -0.61
VEGFA-201ENST00000230480 C19orf24Q9BVV8 132 aa11.21□□□□□ -0.61
VEGFA-201ENST00000230480 MND1Q9BWT6 205 aa11.21□□□□□ -0.61
VEGFA-201ENST00000230480 CHST6Q9GZX3 395 aa11.21□□□□□ -0.61
VEGFA-201ENST00000230480 ONECUT1Q9UBC0 465 aa11.21□□□□□ -0.61
VEGFA-201ENST00000230480 GSTK1Q9Y2Q3 226 aa11.21□□□□□ -0.61
VEGFA-201ENST00000230480 A0A0U1RQK1 487 aa11.2□□□□□ -0.62
VEGFA-201ENST00000230480 SHISA3A0PJX4 238 aa11.2□□□□□ -0.62
VEGFA-201ENST00000230480 J3QRK9 145 aa11.2□□□□□ -0.62
VEGFA-201ENST00000230480 M0R1W7 72 aa11.2□□□□□ -0.62
VEGFA-201ENST00000230480 SIRPB1O00241 398 aa11.2□□□□□ -0.62
VEGFA-201ENST00000230480 SLC33A1O00400 549 aaPredicted RBP11.2□□□□□ -0.62
VEGFA-201ENST00000230480 RGS13O14921 159 aa11.2□□□□□ -0.62
VEGFA-201ENST00000230480 ZNF182P17025 639 aaPredicted RBP11.2□□□□□ -0.62
VEGFA-201ENST00000230480 GDNFP39905 211 aa11.2□□□□□ -0.62
VEGFA-201ENST00000230480 RPL31P62899 125 aaKnown RBP11.2□□□□□ -0.62
VEGFA-201ENST00000230480 UBA52P62987 128 aaKnown RBP11.2□□□□□ -0.62
VEGFA-201ENST00000230480 EMX1Q04741 257 aaPredicted RBP11.2□□□□□ -0.62
VEGFA-201ENST00000230480 GPR50Q13585 617 aa11.2□□□□□ -0.62
VEGFA-201ENST00000230480 SLC9A3R2Q15599 337 aa11.2□□□□□ -0.62
VEGFA-201ENST00000230480 NEDD8Q15843 81 aa11.2□□□□□ -0.62
VEGFA-201ENST00000230480 PIGYQ3MUY2 71 aa11.2□□□□□ -0.62
VEGFA-201ENST00000230480 SPIN3Q5JUX0 258 aa11.2□□□□□ -0.62
VEGFA-201ENST00000230480 DDI2Q5TDH0 399 aa11.2□□□□□ -0.62
VEGFA-201ENST00000230480 METTL11BQ5VVY1 283 aa11.2□□□□□ -0.62
VEGFA-201ENST00000230480 LIPKQ5VXJ0 399 aa11.2□□□□□ -0.62
VEGFA-201ENST00000230480 BAIAP2L2Q6UXY1 529 aa11.2□□□□□ -0.62
VEGFA-201ENST00000230480 Q8IYB0 196 aa11.2□□□□□ -0.62
VEGFA-201ENST00000230480 TEX29Q8N6K0 151 aa11.2□□□□□ -0.62
VEGFA-201ENST00000230480 TNFAIP8L1Q8WVP5 186 aa11.2□□□□□ -0.62
VEGFA-201ENST00000230480 MUL1Q969V5 352 aa11.2□□□□□ -0.62
VEGFA-201ENST00000230480 ISYNA1Q9NPH2 558 aa11.2□□□□□ -0.62
VEGFA-201ENST00000230480 ACOT13Q9NPJ3 140 aa11.2□□□□□ -0.62
VEGFA-201ENST00000230480 IL36GQ9NZH8 169 aa11.2□□□□□ -0.62
VEGFA-201ENST00000230480 FOXJ3Q9UPW0 622 aa11.2□□□□□ -0.62
VEGFA-201ENST00000230480 DNAJC9-AS1A6NH13 148 aa11.19□□□□□ -0.62
VEGFA-201ENST00000230480 MRPS14O60783 128 aaKnown RBP11.19□□□□□ -0.62
VEGFA-201ENST00000230480 CD2P06729 351 aa11.19□□□□□ -0.62
VEGFA-201ENST00000230480 CPEP16870 476 aa11.19□□□□□ -0.62
VEGFA-201ENST00000230480 PAX6P26367 422 aa11.19□□□□□ -0.62
VEGFA-201ENST00000230480 ZNF93P35789 620 aaPredicted RBP11.19□□□□□ -0.62
VEGFA-201ENST00000230480 MED22Q15528 200 aa11.19□□□□□ -0.62
VEGFA-201ENST00000230480 Q6YL49 198 aa11.19□□□□□ -0.62
VEGFA-201ENST00000230480 FAM185AQ8N0U4 392 aa11.19□□□□□ -0.62
VEGFA-201ENST00000230480 PLPPR1Q8TBJ4 325 aa11.19□□□□□ -0.62
VEGFA-201ENST00000230480 MS4A7Q9GZW8 240 aaPredicted RBP11.19□□□□□ -0.62
VEGFA-201ENST00000230480 NAA50Q9GZZ1 169 aaKnown RBP11.19□□□□□ -0.62
VEGFA-201ENST00000230480 A0A1W2PRD5 423 aa11.18□□□□□ -0.62
VEGFA-201ENST00000230480 A0A1W2PRF3 423 aa11.18□□□□□ -0.62
VEGFA-201ENST00000230480 A0A1W2PRM7 423 aa11.18□□□□□ -0.62
VEGFA-201ENST00000230480 MAS1P04201 325 aa11.18□□□□□ -0.62
VEGFA-201ENST00000230480 UCHL1P09936 223 aa11.18□□□□□ -0.62
VEGFA-201ENST00000230480 FPR2P25090 351 aa11.18□□□□□ -0.62
VEGFA-201ENST00000230480 ERP29P30040 261 aaKnown RBP11.18□□□□□ -0.62
VEGFA-201ENST00000230480 GLIPR1P48060 266 aa11.18□□□□□ -0.62
VEGFA-201ENST00000230480 MTNR1BP49286 362 aa11.18□□□□□ -0.62
VEGFA-201ENST00000230480 CAPZA1P52907 286 aa11.18□□□□□ -0.62
VEGFA-201ENST00000230480 FABP5Q01469 135 aa11.18□□□□□ -0.62
VEGFA-201ENST00000230480 AESQ08117 197 aa11.18□□□□□ -0.62
VEGFA-201ENST00000230480 MLLT11Q13015 90 aaPredicted RBP11.18□□□□□ -0.62
VEGFA-201ENST00000230480 TBCEQ15813 527 aaPredicted RBP11.18□□□□□ -0.62
VEGFA-201ENST00000230480 NHLRC3Q5JS37 347 aa11.18□□□□□ -0.62
VEGFA-201ENST00000230480 GPR157Q5UAW9 335 aa11.18□□□□□ -0.62
VEGFA-201ENST00000230480 SIGIRRQ6IA17 410 aa11.18□□□□□ -0.62
VEGFA-201ENST00000230480 SPARTQ8N0X7 666 aa11.18□□□□□ -0.62
VEGFA-201ENST00000230480 CADM3Q8N126 398 aa11.18□□□□□ -0.62
VEGFA-201ENST00000230480 DYNAPQ8N1N2 210 aa11.18□□□□□ -0.62
VEGFA-201ENST00000230480 BPIFB2Q8N4F0 458 aa11.18□□□□□ -0.62
VEGFA-201ENST00000230480 ASCC1Q8N9N2 400 aaKnown RBP11.18□□□□□ -0.62
VEGFA-201ENST00000230480 TMEM104Q8NE00 496 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms