RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 Dnah12Q3V0Q1 3086 aa7.84□□□□□ -1.15
Upf3b-201ENSMUST00000076265 Tmem131O70472 1877 aa7.84□□□□□ -1.15
Upf3b-201ENSMUST00000076265 Olfr1214A2ATG3 311 aa7.84□□□□□ -1.15
Upf3b-201ENSMUST00000076265 Olfr432E9Q8M2 312 aa7.84□□□□□ -1.15
Upf3b-201ENSMUST00000076265 Gm10801F7C7Q0 168 aa7.84□□□□□ -1.15
Upf3b-201ENSMUST00000076265 Calhm3J3QMI4 347 aa7.84□□□□□ -1.15
Upf3b-201ENSMUST00000076265 Vmn1r16K7N775 303 aa7.84□□□□□ -1.15
Upf3b-201ENSMUST00000076265 Itln1O88310 313 aa7.84□□□□□ -1.15
Upf3b-201ENSMUST00000076265 P01803 113 aa7.84□□□□□ -1.15
Upf3b-201ENSMUST00000076265 P01811 117 aa7.84□□□□□ -1.15
Upf3b-201ENSMUST00000076265 Klk1b5P15945 261 aa7.84□□□□□ -1.15
Upf3b-201ENSMUST00000076265 Gstm3P19639 218 aa7.84□□□□□ -1.15
Upf3b-201ENSMUST00000076265 Hoxb9P20615 250 aa7.84□□□□□ -1.15
Upf3b-201ENSMUST00000076265 Rpl12P35979 165 aaKnown RBP7.84□□□□□ -1.15
Upf3b-201ENSMUST00000076265 AboP38649 332 aa7.84□□□□□ -1.15
Upf3b-201ENSMUST00000076265 Pcbp3P57722 371 aaKnown RBP7.84□□□□□ -1.15
Upf3b-201ENSMUST00000076265 Zfp936Q3ULA8 456 aa7.84□□□□□ -1.15
Upf3b-201ENSMUST00000076265 Wdr34Q5U4F6 535 aa7.84□□□□□ -1.15
Upf3b-201ENSMUST00000076265 Tas2r134Q7TQB0 298 aa7.84□□□□□ -1.15
Upf3b-201ENSMUST00000076265 Slc1a7Q8JZR4 559 aa7.84□□□□□ -1.15
Upf3b-201ENSMUST00000076265 Prl3c1Q9QUN5 212 aa7.84□□□□□ -1.15
Upf3b-201ENSMUST00000076265 St6galnac3Q9WUV2 305 aa7.84□□□□□ -1.15
Upf3b-201ENSMUST00000076265 Cldn9Q9Z0S7 217 aa7.84□□□□□ -1.15
Upf3b-201ENSMUST00000076265 Rhox2bA2A447 191 aa7.84□□□□□ -1.15
Upf3b-201ENSMUST00000076265 FggyA2AJL3 552 aa7.84□□□□□ -1.15
Upf3b-201ENSMUST00000076265 Olfr1306A2BFL7 312 aa7.84□□□□□ -1.15
Upf3b-201ENSMUST00000076265 Gm8765B7ZWJ3 1017 aa7.84□□□□□ -1.15
Upf3b-201ENSMUST00000076265 Gm1110F6Y113 635 aa7.84□□□□□ -1.15
Upf3b-201ENSMUST00000076265 Cyp2j6O54750 501 aa7.84□□□□□ -1.15
Upf3b-201ENSMUST00000076265 Mtnd4P03911 459 aa7.84□□□□□ -1.15
Upf3b-201ENSMUST00000076265 Prl2c2P04095 224 aa7.84□□□□□ -1.15
Upf3b-201ENSMUST00000076265 P20040 264 aa7.84□□□□□ -1.15
Upf3b-201ENSMUST00000076265 Tnfsf10P50592 291 aa7.84□□□□□ -1.15
Upf3b-201ENSMUST00000076265 Myl2P51667 166 aa7.84□□□□□ -1.15
Upf3b-201ENSMUST00000076265 Uchl4P58321 233 aa7.84□□□□□ -1.15
Upf3b-201ENSMUST00000076265 Abce1P61222 599 aaKnown RBP7.84□□□□□ -1.15
Upf3b-201ENSMUST00000076265 Defb25Q30KN8 71 aa7.84□□□□□ -1.15
Upf3b-201ENSMUST00000076265 Gm906Q3V0M1 1017 aa7.84□□□□□ -1.15
Upf3b-201ENSMUST00000076265 Olfr1307Q7TQX1 312 aa7.84□□□□□ -1.15
Upf3b-201ENSMUST00000076265 Hist1h2ahQ8CGP6 128 aa7.84□□□□□ -1.15
Upf3b-201ENSMUST00000076265 Dus3lQ91XI1 637 aaKnown RBP7.84□□□□□ -1.15
Upf3b-201ENSMUST00000076265 Efcab1Q9D3N2 212 aa7.84□□□□□ -1.15
Upf3b-201ENSMUST00000076265 Fundc2Q9D6K8 151 aa7.84□□□□□ -1.15
Upf3b-201ENSMUST00000076265 Vps29Q9QZ88 182 aa7.84□□□□□ -1.15
Upf3b-201ENSMUST00000076265 Trav15d-1-dv6d-1A0A075B624 124 aa7.83□□□□□ -1.16
Upf3b-201ENSMUST00000076265 A0A1Y7VLE6 161 aa7.83□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Vmn2r116E9Q6I0 856 aa7.83□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Gm2174F6ZVF2 133 aa7.83□□□□□ -1.16
Upf3b-201ENSMUST00000076265 MrasO08989 208 aa7.83□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Banf1O54962 89 aa7.83□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Nipsnap2O55126 281 aa7.83□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Rpl35aO55142 110 aa7.83□□□□□ -1.16
Upf3b-201ENSMUST00000076265 P01678 107 aa7.83□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Ceacam1P31809 521 aa7.83□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Dgcr2P98154 548 aa7.83□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Runx1Q03347 451 aa7.83□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Rtp3Q5QGU6 474 aa7.83□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Cfhr1Q61406 343 aa7.83□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Ffar4Q7TMA4 361 aa7.83□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Tas2r3Q7TQA7 316 aa7.83□□□□□ -1.16
Upf3b-201ENSMUST00000076265 9130023H24RikQ8BG98 337 aa7.83□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Ankrd55Q8BLD6 626 aa7.83□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Pggt1bQ8BUY9 377 aa7.83□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Pla2g3Q8BZT7 504 aa7.83□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Olfr593Q8VF28 327 aa7.83□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Olfr786Q8VFH8 312 aa7.83□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Glyr1Q922P9 546 aaKnown RBP7.83□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Rgs18Q99PG4 235 aa7.83□□□□□ -1.16
Upf3b-201ENSMUST00000076265 PrelpQ9JK53 378 aa7.83□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Abcb11Q9QY30 1321 aa7.83□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Cdh23Q99PF4 3354 aa7.83□□□□□ -1.16
Upf3b-201ENSMUST00000076265 D930048N14RikA2AA67 225 aa7.83□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Dhx35A2ACQ1 703 aaKnown RBP7.83□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Olfr739E9Q1P0 309 aa7.83□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Zfp94E9Q6Y4 486 aa7.83□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Rpl21O09167 160 aaKnown RBP7.83□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Kcns1O35173 497 aa7.83□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Ifna2P01573 190 aa7.83□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Epha3P29319 983 aa7.83□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Guca1aP43081 202 aa7.83□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Cav1P49817 178 aa7.83□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Rpl31P62900 125 aaKnown RBP7.83□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Vmn1r196Q5SVD5 301 aa7.83□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Foxg1Q60987 481 aa7.83□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Cxxc4Q6NXI8 198 aa7.83□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Hapln4Q80WM4 400 aa7.83□□□□□ -1.16
Upf3b-201ENSMUST00000076265 GalmQ8K157 342 aa7.83□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Vopp1Q8R1C3 172 aa7.83□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Olfr1423Q8VFV0 310 aa7.83□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Olfr541Q8VGM0 312 aa7.83□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Mrgpra4Q91WW2 313 aa7.83□□□□□ -1.16
Upf3b-201ENSMUST00000076265 SvbpQ99LQ4 66 aa7.83□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Pgpep1lQ9CWB5 130 aa7.83□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Hyls1Q9CXX0 307 aa7.83□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Trmt5Q9D0C4 501 aa7.83□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Gp2Q9D733 531 aa7.83□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Prr30Q9D9B7 401 aa7.83□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Plin3Q9DBG5 437 aa7.83□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Sult1b1Q9QWG7 299 aa7.83□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Slc35a2Q9R0M8 390 aa7.83□□□□□ -1.16
Retrieved 100 of 22,080 RNA–protein pairs in 30.9 ms