RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 SftpcP21841 193 aa14.49□□□□□ -0.09
Shh-201ENSMUST00000002708 S1pr2P52592 352 aa14.49□□□□□ -0.09
Shh-201ENSMUST00000002708 Supt4h1aP63271 117 aa14.49□□□□□ -0.09
Shh-201ENSMUST00000002708 Slc38a11Q3USY0 453 aa14.49□□□□□ -0.09
Shh-201ENSMUST00000002708 Glra1Q64018 457 aa14.49□□□□□ -0.09
Shh-201ENSMUST00000002708 Ccdc36Q6PDM4 574 aa14.49□□□□□ -0.09
Shh-201ENSMUST00000002708 Olfr885Q7TRE0 309 aa14.49□□□□□ -0.09
Shh-201ENSMUST00000002708 MastlQ8C0P0 865 aa14.49□□□□□ -0.09
Shh-201ENSMUST00000002708 Alg12Q8VDB2 486 aa14.49□□□□□ -0.09
Shh-201ENSMUST00000002708 Olfr794Q8VF26 320 aa14.49□□□□□ -0.09
Shh-201ENSMUST00000002708 Olfr279Q8VFD8 310 aa14.49□□□□□ -0.09
Shh-201ENSMUST00000002708 Fgf16Q9ESL8 207 aa14.49□□□□□ -0.09
Shh-201ENSMUST00000002708 Hacd1Q9QY80 281 aa14.49□□□□□ -0.09
Shh-201ENSMUST00000002708 Slc37a2Q9WU81 501 aa14.49□□□□□ -0.09
Shh-201ENSMUST00000002708 SncgQ9Z0F7 123 aaKnown RBP14.49□□□□□ -0.09
Shh-201ENSMUST00000002708 Dchs1E9PVD3 3291 aa14.49□□□□□ -0.09
Shh-201ENSMUST00000002708 Gm21488A0A087WR99 222 aa14.48□□□□□ -0.09
Shh-201ENSMUST00000002708 FggyA2AJL3 552 aa14.48□□□□□ -0.09
Shh-201ENSMUST00000002708 RpiaP47968 303 aa14.48□□□□□ -0.09
Shh-201ENSMUST00000002708 DdiasQ6NZG4 898 aa14.48□□□□□ -0.09
Shh-201ENSMUST00000002708 Q80X32 188 aaKnown RBP14.48□□□□□ -0.09
Shh-201ENSMUST00000002708 Adamts4Q8BNJ2 833 aa14.48□□□□□ -0.09
Shh-201ENSMUST00000002708 Abhd3Q91ZH7 411 aa14.48□□□□□ -0.09
Shh-201ENSMUST00000002708 Hsbp1Q9CQZ1 76 aa14.48□□□□□ -0.09
Shh-201ENSMUST00000002708 Vmn1r172Q9EPS4 313 aa14.48□□□□□ -0.09
Shh-201ENSMUST00000002708 Akip1Q9JJR5 212 aa14.48□□□□□ -0.09
Shh-201ENSMUST00000002708 Ap4m1Q9JKC7 449 aa14.48□□□□□ -0.09
Shh-201ENSMUST00000002708 Gm5901D3YVJ1 333 aa14.48□□□□□ -0.09
Shh-201ENSMUST00000002708 Olfr370E9Q848 314 aa14.48□□□□□ -0.09
Shh-201ENSMUST00000002708 Tspan15F7BWT7 294 aa14.48□□□□□ -0.09
Shh-201ENSMUST00000002708 Raet1aO08602 253 aa14.48□□□□□ -0.09
Shh-201ENSMUST00000002708 Raet1bO08603 253 aa14.48□□□□□ -0.09
Shh-201ENSMUST00000002708 Serf1O88892 62 aa14.48□□□□□ -0.09
Shh-201ENSMUST00000002708 FgrP14234 517 aa14.48□□□□□ -0.09
Shh-201ENSMUST00000002708 MpzP27573 248 aa14.48□□□□□ -0.09
Shh-201ENSMUST00000002708 Perm1Q149B8 807 aa14.48□□□□□ -0.09
Shh-201ENSMUST00000002708 CstbQ62426 98 aaKnown RBP14.48□□□□□ -0.09
Shh-201ENSMUST00000002708 Lcn4Q62472 185 aa14.48□□□□□ -0.09
Shh-201ENSMUST00000002708 Zfp286Q8C0E6 519 aa14.48□□□□□ -0.09
Shh-201ENSMUST00000002708 C1ql2Q8CFR0 287 aa14.48□□□□□ -0.09
Shh-201ENSMUST00000002708 Cst14Q8VII3 130 aa14.48□□□□□ -0.09
Shh-201ENSMUST00000002708 Ogfod3Q9D136 315 aa14.48□□□□□ -0.09
Shh-201ENSMUST00000002708 Irak1bp1Q9ESJ7 259 aa14.48□□□□□ -0.09
Shh-201ENSMUST00000002708 Fxyd1Q9Z239 92 aa14.48□□□□□ -0.09
Shh-201ENSMUST00000002708 Prr12E9PYL2 2035 aaKnown RBP14.48□□□□□ -0.09
Shh-201ENSMUST00000002708 Esp16A8R0U9 85 aa14.47□□□□□ -0.09
Shh-201ENSMUST00000002708 Olfr608E9Q564 316 aa14.47□□□□□ -0.09
Shh-201ENSMUST00000002708 Tex45G3XA23 500 aa14.47□□□□□ -0.09
Shh-201ENSMUST00000002708 Igh-1aP01865 398 aa14.47□□□□□ -0.09
Shh-201ENSMUST00000002708 RidaP52760 135 aa14.47□□□□□ -0.09
Shh-201ENSMUST00000002708 Ldlrad2Q3V0V0 142 aa14.47□□□□□ -0.09
Shh-201ENSMUST00000002708 Gm525Q3V3I5 90 aa14.47□□□□□ -0.09
Shh-201ENSMUST00000002708 Slc22a14Q497L9 629 aa14.47□□□□□ -0.09
Shh-201ENSMUST00000002708 PnkdQ69ZP3 385 aa14.47□□□□□ -0.09
Shh-201ENSMUST00000002708 Olfr1212Q7TR08 311 aa14.47□□□□□ -0.09
Shh-201ENSMUST00000002708 Olfr1148Q7TR35 314 aa14.47□□□□□ -0.09
Shh-201ENSMUST00000002708 Srrm4Q8BKA3 608 aa14.47□□□□□ -0.09
Shh-201ENSMUST00000002708 Rnf144bQ8BKD6 301 aa14.47□□□□□ -0.09
Shh-201ENSMUST00000002708 LmlnQ8BMN4 681 aa14.47□□□□□ -0.09
Shh-201ENSMUST00000002708 Ubqln3Q8C5U9 658 aa14.47□□□□□ -0.09
Shh-201ENSMUST00000002708 Entpd8Q8K0L2 497 aa14.47□□□□□ -0.09
Shh-201ENSMUST00000002708 Olfr536Q8VFE9 307 aa14.47□□□□□ -0.09
Shh-201ENSMUST00000002708 2210010C04RikQ9CPN9 247 aaKnown RBP14.47□□□□□ -0.09
Shh-201ENSMUST00000002708 Slc30a7Q9JKN1 378 aa14.47□□□□□ -0.09
Shh-201ENSMUST00000002708 Trip12G5E870 2025 aaKnown RBP14.47□□□□□ -0.09
Shh-201ENSMUST00000002708 Trav6-7-dv9A0A075B639 125 aa14.47□□□□□ -0.09
Shh-201ENSMUST00000002708 Dmrta2A2A9A2 531 aa14.47□□□□□ -0.09
Shh-201ENSMUST00000002708 Olfr1158A2BHP7 313 aa14.47□□□□□ -0.09
Shh-201ENSMUST00000002708 Zfp456B2RUK9 458 aa14.47□□□□□ -0.09
Shh-201ENSMUST00000002708 Olfr613E9PYB4 317 aa14.47□□□□□ -0.09
Shh-201ENSMUST00000002708 Fbxw25F7C9P2 466 aa14.47□□□□□ -0.09
Shh-201ENSMUST00000002708 Emg1O35130 244 aaKnown RBP14.47□□□□□ -0.09
Shh-201ENSMUST00000002708 AhsgP29699 345 aa14.47□□□□□ -0.09
Shh-201ENSMUST00000002708 Gabrr1P56475 480 aa14.47□□□□□ -0.09
Shh-201ENSMUST00000002708 AccslQ3UX83 580 aa14.47□□□□□ -0.09
Shh-201ENSMUST00000002708 Klhl24Q8BRG6 600 aa14.47□□□□□ -0.09
Shh-201ENSMUST00000002708 Nat8Q9JIY7 227 aa14.47□□□□□ -0.09
Shh-201ENSMUST00000002708 Ackr1Q9QUI6 334 aa14.47□□□□□ -0.09
Shh-201ENSMUST00000002708 1700015F17RikD3YUK8 150 aa14.47□□□□□ -0.09
Shh-201ENSMUST00000002708 Olfr424E9Q0Q2 315 aa14.47□□□□□ -0.09
Shh-201ENSMUST00000002708 Lrp3E9Q1T6 790 aa14.47□□□□□ -0.09
Shh-201ENSMUST00000002708 Wsb1O54927 421 aa14.47□□□□□ -0.09
Shh-201ENSMUST00000002708 Stc2O88452 296 aa14.47□□□□□ -0.09
Shh-201ENSMUST00000002708 Cd40lgP27548 260 aa14.47□□□□□ -0.09
Shh-201ENSMUST00000002708 Rab6aP35279 208 aaKnown RBP14.47□□□□□ -0.09
Shh-201ENSMUST00000002708 Tmem211Q3UUA0 195 aa14.47□□□□□ -0.09
Shh-201ENSMUST00000002708 Fam220aQ3ZN08 260 aa14.47□□□□□ -0.09
Shh-201ENSMUST00000002708 Phox2aQ62066 280 aa14.47□□□□□ -0.09
Shh-201ENSMUST00000002708 Dmrta1Q8CFG4 490 aa14.47□□□□□ -0.09
Shh-201ENSMUST00000002708 Mrpl48Q8JZS9 211 aaKnown RBP14.47□□□□□ -0.09
Shh-201ENSMUST00000002708 NaxeQ8K4Z3 282 aa14.47□□□□□ -0.09
Shh-201ENSMUST00000002708 Olfr135Q8VEY4 312 aa14.47□□□□□ -0.09
Shh-201ENSMUST00000002708 Hyal1Q91ZJ9 462 aa14.47□□□□□ -0.09
Shh-201ENSMUST00000002708 HaghQ99KB8 309 aa14.47□□□□□ -0.09
Shh-201ENSMUST00000002708 Znf593Q9DB42 134 aaKnown RBP14.47□□□□□ -0.09
Shh-201ENSMUST00000002708 Mmp16Q9WTR0 607 aa14.47□□□□□ -0.09
Shh-201ENSMUST00000002708 ChrdQ9Z0E2 948 aa14.47□□□□□ -0.09
Shh-201ENSMUST00000002708 Col6a3E9PWQ3 3284 aa14.46□□□□□ -0.09
Shh-201ENSMUST00000002708 Hbb-bh2B2RVB7 147 aa14.46□□□□□ -0.09
Shh-201ENSMUST00000002708 Spink14B9EJP9 96 aa14.46□□□□□ -0.09
Retrieved 100 of 22,080 RNA–protein pairs in 34.5 ms