RNA–Protein interactions for RNA: ENST00000640076.1

SCARB2-220, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 1,991 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-220ENST00000640076 SDC2P34741 201 aa6.79□□□□□ -1.32
SCARB2-220ENST00000640076 FHITP49789 147 aa6.79□□□□□ -1.32
SCARB2-220ENST00000640076 PPP1CBP62140 327 aa6.79□□□□□ -1.32
SCARB2-220ENST00000640076 FAM3AP98173 230 aa6.79□□□□□ -1.32
SCARB2-220ENST00000640076 TNK1Q13470 666 aa6.79□□□□□ -1.32
SCARB2-220ENST00000640076 OR8B8Q15620 311 aa6.79□□□□□ -1.32
SCARB2-220ENST00000640076 HSD17B12Q53GQ0 312 aa6.79□□□□□ -1.32
SCARB2-220ENST00000640076 UNQ6126/PRO20091Q6UXV3 157 aa6.79□□□□□ -1.32
SCARB2-220ENST00000640076 USP43Q70EL4 1123 aa6.79□□□□□ -1.32
SCARB2-220ENST00000640076 PARP16Q8N5Y8 322 aa6.79□□□□□ -1.32
SCARB2-220ENST00000640076 CCDC54Q8NEL0 328 aa6.79□□□□□ -1.32
SCARB2-220ENST00000640076 OR5L1Q8NGL2 311 aa6.79□□□□□ -1.32
SCARB2-220ENST00000640076 LINC01560Q8TB33 94 aa6.79□□□□□ -1.32
SCARB2-220ENST00000640076 TMEM170AQ8WVE7 144 aa6.79□□□□□ -1.32
SCARB2-220ENST00000640076 FGGYQ96C11 551 aa6.79□□□□□ -1.32
SCARB2-220ENST00000640076 ADAT3Q96EY9 351 aaPredicted RBP6.79□□□□□ -1.32
SCARB2-220ENST00000640076 DCSTAMPQ9H295 470 aa6.79□□□□□ -1.32
SCARB2-220ENST00000640076 CLEC5AQ9NY25 188 aa6.79□□□□□ -1.32
SCARB2-220ENST00000640076 PKDREJQ9NTG1 2253 aa6.79□□□□□ -1.32
SCARB2-220ENST00000640076 TRAV8-7A0A075B6U6 113 aa6.78□□□□□ -1.32
SCARB2-220ENST00000640076 TRAV1-2A0A0B4J238 106 aa6.78□□□□□ -1.32
SCARB2-220ENST00000640076 DPRXA6NFQ7 191 aa6.78□□□□□ -1.32
SCARB2-220ENST00000640076 TUBAL3A6NHL2 446 aa6.78□□□□□ -1.32
SCARB2-220ENST00000640076 A6NIN4 97 aa6.78□□□□□ -1.32
SCARB2-220ENST00000640076 KDM4BO94953 1096 aa6.78□□□□□ -1.32
SCARB2-220ENST00000640076 RNF224P0DH78 156 aa6.78□□□□□ -1.32
SCARB2-220ENST00000640076 SERPINB10P48595 397 aa6.78□□□□□ -1.32
SCARB2-220ENST00000640076 ERVS71-1P61550 626 aa6.78□□□□□ -1.32
SCARB2-220ENST00000640076 BSPH1Q075Z2 132 aa6.78□□□□□ -1.32
SCARB2-220ENST00000640076 SPOCK1Q08629 439 aa6.78□□□□□ -1.32
SCARB2-220ENST00000640076 CNPY1Q3B7I2 92 aa6.78□□□□□ -1.32
SCARB2-220ENST00000640076 FBXW12Q6X9E4 464 aa6.78□□□□□ -1.32
SCARB2-220ENST00000640076 PGAP1Q75T13 922 aa6.78□□□□□ -1.32
SCARB2-220ENST00000640076 MRPL21Q7Z2W9 205 aaKnown RBP6.78□□□□□ -1.32
SCARB2-220ENST00000640076 OR52B4Q8NGK2 314 aa6.78□□□□□ -1.32
SCARB2-220ENST00000640076 OR1J1Q8NGS3 322 aa6.78□□□□□ -1.32
SCARB2-220ENST00000640076 BCL2L14Q9BZR8 327 aa6.78□□□□□ -1.32
SCARB2-220ENST00000640076 OR2J1Q9GZK6 312 aa6.78□□□□□ -1.32
SCARB2-220ENST00000640076 DNTTIP1Q9H147 329 aa6.78□□□□□ -1.32
SCARB2-220ENST00000640076 RIMS4Q9H426 269 aaPredicted RBP6.78□□□□□ -1.32
SCARB2-220ENST00000640076 PLEKHA1Q9HB21 404 aa6.78□□□□□ -1.32
SCARB2-220ENST00000640076 SPATA2Q9UM82 520 aa6.78□□□□□ -1.32
SCARB2-220ENST00000640076 LSM4Q9Y4Z0 139 aaKnown RBP6.78□□□□□ -1.32
SCARB2-220ENST00000640076 A1L4Q6 167 aa6.78□□□□□ -1.32
SCARB2-220ENST00000640076 ATP6V1G2-DDX39BF2Z307 99 aa6.78□□□□□ -1.32
SCARB2-220ENST00000640076 ABCD4O14678 606 aa6.78□□□□□ -1.32
SCARB2-220ENST00000640076 CASKO14936 926 aa6.78□□□□□ -1.32
SCARB2-220ENST00000640076 CDRT1O95170 752 aa6.78□□□□□ -1.32
SCARB2-220ENST00000640076 ZNF20P17024 532 aa6.78□□□□□ -1.32
SCARB2-220ENST00000640076 IGFBP3P17936 291 aaPredicted RBP6.78□□□□□ -1.32
SCARB2-220ENST00000640076 MYL9P24844 172 aa6.78□□□□□ -1.32
SCARB2-220ENST00000640076 AZGP1P25311 298 aaKnown RBP6.78□□□□□ -1.32
SCARB2-220ENST00000640076 RPS19P39019 145 aaKnown RBP6.78□□□□□ -1.32
SCARB2-220ENST00000640076 GDNFP39905 211 aa6.78□□□□□ -1.32
SCARB2-220ENST00000640076 MXD1Q05195 221 aa6.78□□□□□ -1.32
SCARB2-220ENST00000640076 RIPPLY1Q0D2K3 151 aa6.78□□□□□ -1.32
SCARB2-220ENST00000640076 MADCAM1Q13477 382 aa6.78□□□□□ -1.32
SCARB2-220ENST00000640076 USF2Q15853 346 aaPredicted RBP6.78□□□□□ -1.32
SCARB2-220ENST00000640076 CD300EQ496F6 205 aaPredicted RBP6.78□□□□□ -1.32
SCARB2-220ENST00000640076 LBHQ53QV2 105 aaPredicted RBP6.78□□□□□ -1.32
SCARB2-220ENST00000640076 C1orf174Q8IYL3 243 aa6.78□□□□□ -1.32
SCARB2-220ENST00000640076 LINC00482Q8N8I6 264 aa6.78□□□□□ -1.32
SCARB2-220ENST00000640076 MINDY2Q8NBR6 621 aa6.78□□□□□ -1.32
SCARB2-220ENST00000640076 SEMA6DQ8NFY4 1073 aa6.78□□□□□ -1.32
SCARB2-220ENST00000640076 OR56B1Q8NGI3 324 aa6.78□□□□□ -1.32
SCARB2-220ENST00000640076 SLC25A40Q8TBP6 338 aa6.78□□□□□ -1.32
SCARB2-220ENST00000640076 DYNC2LI1Q8TCX1 351 aa6.78□□□□□ -1.32
SCARB2-220ENST00000640076 C10orf35Q96D05 121 aa6.78□□□□□ -1.32
SCARB2-220ENST00000640076 ALKBH7Q9BT30 221 aaPredicted RBP6.78□□□□□ -1.32
SCARB2-220ENST00000640076 DCUN1D5Q9BTE7 237 aa6.78□□□□□ -1.32
SCARB2-220ENST00000640076 TAS2R4Q9NYW5 299 aa6.78□□□□□ -1.32
SCARB2-220ENST00000640076 CKLFQ9UBR5 152 aa6.78□□□□□ -1.32
SCARB2-220ENST00000640076 PIGLQ9Y2B2 252 aa6.78□□□□□ -1.32
SCARB2-220ENST00000640076 CTDSPLO15194 276 aa6.77□□□□□ -1.33
SCARB2-220ENST00000640076 FCGR3BO75015 233 aa6.77□□□□□ -1.33
SCARB2-220ENST00000640076 RAB3DO95716 219 aa6.77□□□□□ -1.33
SCARB2-220ENST00000640076 DDOSTP39656 456 aa6.77□□□□□ -1.33
SCARB2-220ENST00000640076 SRSF1Q07955 248 aaKnown RBP eCLIP6.77□□□□□ -1.33
SCARB2-220ENST00000640076 RIN1Q13671 783 aa6.77□□□□□ -1.33
SCARB2-220ENST00000640076 PDLIM3Q53GG5 364 aaPredicted RBP6.77□□□□□ -1.33
SCARB2-220ENST00000640076 TMEM41BQ5BJD5 291 aa6.77□□□□□ -1.33
SCARB2-220ENST00000640076 TBC1D26Q86UD7 250 aa6.77□□□□□ -1.33
SCARB2-220ENST00000640076 LRRTM1Q86UE6 522 aa6.77□□□□□ -1.33
SCARB2-220ENST00000640076 NR2C2APQ86WQ0 139 aa6.77□□□□□ -1.33
SCARB2-220ENST00000640076 ZDHHC23Q8IYP9 409 aa6.77□□□□□ -1.33
SCARB2-220ENST00000640076 OR5D14Q8NGL3 314 aa6.77□□□□□ -1.33
SCARB2-220ENST00000640076 KLF14Q8TD94 323 aaPredicted RBP6.77□□□□□ -1.33
SCARB2-220ENST00000640076 PP6455Q8WZ26 134 aa6.77□□□□□ -1.33
SCARB2-220ENST00000640076 HAVCR1Q96D42 359 aa6.77□□□□□ -1.33
SCARB2-220ENST00000640076 MS4A10Q96PG2 267 aa6.77□□□□□ -1.33
SCARB2-220ENST00000640076 SLC30A2Q9BRI3 323 aa6.77□□□□□ -1.33
SCARB2-220ENST00000640076 CHST5Q9GZS9 411 aa6.77□□□□□ -1.33
SCARB2-220ENST00000640076 SLITRK2Q9H156 845 aa6.77□□□□□ -1.33
SCARB2-220ENST00000640076 TPK1Q9H3S4 243 aa6.77□□□□□ -1.33
SCARB2-220ENST00000640076 ESRP2Q9H6T0 727 aaKnown RBP6.77□□□□□ -1.33
SCARB2-220ENST00000640076 AUNIPQ9H7T9 357 aa6.77□□□□□ -1.33
SCARB2-220ENST00000640076 FOXJ3Q9UPW0 622 aa6.77□□□□□ -1.33
SCARB2-220ENST00000640076 GGT3PA6NGU5 568 aa6.77□□□□□ -1.33
SCARB2-220ENST00000640076 CD300LBA8K4G0 201 aa6.77□□□□□ -1.33
SCARB2-220ENST00000640076 C19orf84I3L1E1 186 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms