RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 C7orf77A4D0Y5 90 aa12.13□□□□□ -0.47
CACNA1A-228ENST00000636610 HSD17B6O14756 317 aa12.13□□□□□ -0.47
CACNA1A-228ENST00000636610 SSSCA1O60232 199 aa12.13□□□□□ -0.47
CACNA1A-228ENST00000636610 IGLV3-1P01715 115 aa12.13□□□□□ -0.47
CACNA1A-228ENST00000636610 HLA-HP01893 362 aa12.13□□□□□ -0.47
CACNA1A-228ENST00000636610 CD5P06127 495 aa12.13□□□□□ -0.47
CACNA1A-228ENST00000636610 EPHA1P21709 976 aa12.13□□□□□ -0.47
CACNA1A-228ENST00000636610 DVL1P1P54792 670 aaPredicted RBP12.13□□□□□ -0.47
CACNA1A-228ENST00000636610 EIF5AP63241 154 aaKnown RBP12.13□□□□□ -0.47
CACNA1A-228ENST00000636610 CCL20P78556 96 aa12.13□□□□□ -0.47
CACNA1A-228ENST00000636610 PPA1Q15181 289 aa12.13□□□□□ -0.47
CACNA1A-228ENST00000636610 C10orf91Q5T1B1 145 aa12.13□□□□□ -0.47
CACNA1A-228ENST00000636610 SPINK14Q6IE38 97 aa12.13□□□□□ -0.47
CACNA1A-228ENST00000636610 ZNF611Q8N823 705 aa12.13□□□□□ -0.47
CACNA1A-228ENST00000636610 RHBDD1Q8TEB9 315 aa12.13□□□□□ -0.47
CACNA1A-228ENST00000636610 IMMP1LQ96LU5 166 aa12.13□□□□□ -0.47
CACNA1A-228ENST00000636610 FOXB1Q99853 325 aa12.13□□□□□ -0.47
CACNA1A-228ENST00000636610 DUSP23Q9BVJ7 150 aa12.13□□□□□ -0.47
CACNA1A-228ENST00000636610 ZNF700Q9H0M5 742 aa12.13□□□□□ -0.47
CACNA1A-228ENST00000636610 CACFD1Q9UGQ2 172 aa12.13□□□□□ -0.47
CACNA1A-228ENST00000636610 GDF1P27539 372 aa12.13□□□□□ -0.47
CACNA1A-228ENST00000636610 OTX1P32242 354 aaPredicted RBP12.13□□□□□ -0.47
CACNA1A-228ENST00000636610 GPM6AP51674 278 aa12.13□□□□□ -0.47
CACNA1A-228ENST00000636610 ZNF133P52736 654 aaPredicted RBP12.13□□□□□ -0.47
CACNA1A-228ENST00000636610 RUNX1Q01196 453 aa12.13□□□□□ -0.47
CACNA1A-228ENST00000636610 HABP2Q14520 560 aaPredicted RBP12.13□□□□□ -0.47
CACNA1A-228ENST00000636610 CXorf66Q5JRM2 361 aaPredicted RBP12.13□□□□□ -0.47
CACNA1A-228ENST00000636610 ANGPTL4Q9BY76 406 aa12.13□□□□□ -0.47
CACNA1A-228ENST00000636610 SLC7A10Q9NS82 523 aa12.13□□□□□ -0.47
CACNA1A-228ENST00000636610 FAM212BQ9NTI7 297 aaPredicted RBP12.13□□□□□ -0.47
CACNA1A-228ENST00000636610 UBE2J1Q9Y385 318 aaPredicted RBP12.13□□□□□ -0.47
CACNA1A-228ENST00000636610 URGCP-MRPS24S4R325 110 aa12.13□□□□□ -0.47
CACNA1A-228ENST00000636610 CEP250Q9BV73 2442 aa12.13□□□□□ -0.47
CACNA1A-228ENST00000636610 CACNA1GO43497 2377 aa12.13□□□□□ -0.47
CACNA1A-228ENST00000636610 SCTP09683 121 aa12.13□□□□□ -0.47
CACNA1A-228ENST00000636610 CRYGSP22914 178 aa12.13□□□□□ -0.47
CACNA1A-228ENST00000636610 CTSSP25774 331 aa12.13□□□□□ -0.47
CACNA1A-228ENST00000636610 PLA2G5P39877 138 aa12.13□□□□□ -0.47
CACNA1A-228ENST00000636610 RAC1P63000 192 aa12.13□□□□□ -0.47
CACNA1A-228ENST00000636610 FAM3AP98173 230 aa12.13□□□□□ -0.47
CACNA1A-228ENST00000636610 MALLQ13021 153 aa12.13□□□□□ -0.47
CACNA1A-228ENST00000636610 CPEB3Q8NE35 698 aaKnown RBP12.13□□□□□ -0.47
CACNA1A-228ENST00000636610 NTNG2Q96CW9 530 aa12.13□□□□□ -0.47
CACNA1A-228ENST00000636610 TMEM38BQ9NVV0 291 aa12.13□□□□□ -0.47
CACNA1A-228ENST00000636610 ARHGAP21Q5T5U3 1957 aa12.12□□□□□ -0.47
CACNA1A-228ENST00000636610 ICE1Q9Y2F5 2266 aa12.12□□□□□ -0.47
CACNA1A-228ENST00000636610 PINLYPA6NC86 204 aa12.12□□□□□ -0.47
CACNA1A-228ENST00000636610 UMAD1C9J7I0 102 aa12.12□□□□□ -0.47
CACNA1A-228ENST00000636610 TAAR5O14804 337 aa12.12□□□□□ -0.47
CACNA1A-228ENST00000636610 TOX3O15405 576 aaPredicted RBP12.12□□□□□ -0.47
CACNA1A-228ENST00000636610 P04436 131 aa12.12□□□□□ -0.47
CACNA1A-228ENST00000636610 HAAOP46952 286 aa12.12□□□□□ -0.47
CACNA1A-228ENST00000636610 MRPS34P82930 218 aaKnown RBP12.12□□□□□ -0.47
CACNA1A-228ENST00000636610 HAGHQ16775 308 aa12.12□□□□□ -0.47
CACNA1A-228ENST00000636610 HES7Q9BYE0 225 aa12.12□□□□□ -0.47
CACNA1A-228ENST00000636610 DEPPQ9NTK1 212 aa12.12□□□□□ -0.47
CACNA1A-228ENST00000636610 SLC7A11Q9UPY5 501 aa12.12□□□□□ -0.47
CACNA1A-228ENST00000636610 MED13Q9UHV7 2174 aa12.12□□□□□ -0.47
CACNA1A-228ENST00000636610 EP300Q09472 2414 aaPredicted RBP12.12□□□□□ -0.47
CACNA1A-228ENST00000636610 NCKAP5O14513 1909 aa12.12□□□□□ -0.47
CACNA1A-228ENST00000636610 ADAMTS20P59510 1910 aa12.12□□□□□ -0.47
CACNA1A-228ENST00000636610 E5RGE8 158 aa12.12□□□□□ -0.47
CACNA1A-228ENST00000636610 TXNL1O43396 289 aa12.12□□□□□ -0.47
CACNA1A-228ENST00000636610 CELA3AP09093 270 aa12.12□□□□□ -0.47
CACNA1A-228ENST00000636610 NR2C1P13056 603 aa12.12□□□□□ -0.47
CACNA1A-228ENST00000636610 ZNF14P17017 642 aaPredicted RBP12.12□□□□□ -0.47
CACNA1A-228ENST00000636610 TCN2P20062 427 aa12.12□□□□□ -0.47
CACNA1A-228ENST00000636610 ALDH3B1P43353 468 aa12.12□□□□□ -0.47
CACNA1A-228ENST00000636610 RAB35Q15286 201 aa12.12□□□□□ -0.47
CACNA1A-228ENST00000636610 CNN3Q15417 329 aaKnown RBP12.12□□□□□ -0.47
CACNA1A-228ENST00000636610 C3AR1Q16581 482 aa12.12□□□□□ -0.47
CACNA1A-228ENST00000636610 HIST1H2BAQ96A08 127 aa12.12□□□□□ -0.47
CACNA1A-228ENST00000636610 WNT5BQ9H1J7 359 aa12.12□□□□□ -0.47
CACNA1A-228ENST00000636610 CALHM2Q9HA72 323 aa12.12□□□□□ -0.47
CACNA1A-228ENST00000636610 ZNF286AQ9HBT8 521 aa12.12□□□□□ -0.47
CACNA1A-228ENST00000636610 PRDM6Q9NQX0 595 aa12.12□□□□□ -0.47
CACNA1A-228ENST00000636610 PARP11Q9NR21 331 aa12.12□□□□□ -0.47
CACNA1A-228ENST00000636610 C19orf12Q9NSK7 152 aa12.12□□□□□ -0.47
CACNA1A-228ENST00000636610 NSG2Q9Y328 171 aa12.12□□□□□ -0.47
CACNA1A-228ENST00000636610 ST8SIA3O43173 380 aa12.11□□□□□ -0.47
CACNA1A-228ENST00000636610 CBR3O75828 277 aa12.11□□□□□ -0.47
CACNA1A-228ENST00000636610 VAMP5O95183 116 aa12.11□□□□□ -0.47
CACNA1A-228ENST00000636610 H2AFB1P0C5Y9 115 aa12.11□□□□□ -0.47
CACNA1A-228ENST00000636610 EDN3P14138 238 aa12.11□□□□□ -0.47
CACNA1A-228ENST00000636610 BCL3P20749 454 aa12.11□□□□□ -0.47
CACNA1A-228ENST00000636610 GLP1RP43220 463 aa12.11□□□□□ -0.47
CACNA1A-228ENST00000636610 CLDN15P56746 228 aa12.11□□□□□ -0.47
CACNA1A-228ENST00000636610 SURF2Q15527 256 aaPredicted RBP12.11□□□□□ -0.47
CACNA1A-228ENST00000636610 LIAT1Q6ZQX7 453 aa12.11□□□□□ -0.47
CACNA1A-228ENST00000636610 AGBL5Q8NDL9 886 aa12.11□□□□□ -0.47
CACNA1A-228ENST00000636610 OR56B2PQ8NGI1 322 aa12.11□□□□□ -0.47
CACNA1A-228ENST00000636610 PCED1AQ9H1Q7 454 aa12.11□□□□□ -0.47
CACNA1A-228ENST00000636610 BCO1Q9HAY6 547 aa12.11□□□□□ -0.47
CACNA1A-228ENST00000636610 SMCO4Q9NRQ5 59 aa12.11□□□□□ -0.47
CACNA1A-228ENST00000636610 ZNF727A8MUV8 499 aa12.11□□□□□ -0.47
CACNA1A-228ENST00000636610 HS3ST1O14792 307 aa12.11□□□□□ -0.47
CACNA1A-228ENST00000636610 SNCAP37840 140 aa12.11□□□□□ -0.47
CACNA1A-228ENST00000636610 IL1F10Q8WWZ1 152 aa12.11□□□□□ -0.47
CACNA1A-228ENST00000636610 MSI2Q96DH6 328 aaKnown RBP12.11□□□□□ -0.47
CACNA1A-228ENST00000636610 BCL2L14Q9BZR8 327 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms