RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 CCDC144NLQ6NUI1 221 aa7.82□□□□□ -1.16
HDAC9-229ENST00000622668 ZNF596Q8TC21 504 aa7.82□□□□□ -1.16
HDAC9-229ENST00000622668 RNF167Q9H6Y7 350 aa7.82□□□□□ -1.16
HDAC9-229ENST00000622668 CLCF1Q9UBD9 225 aa7.82□□□□□ -1.16
HDAC9-229ENST00000622668 MGAT4CQ9UBM8 478 aa7.82□□□□□ -1.16
HDAC9-229ENST00000622668 AUP1Q9Y679 476 aa7.82□□□□□ -1.16
HDAC9-229ENST00000622668 SETD2Q9BYW2 2564 aaPredicted RBP7.82□□□□□ -1.16
HDAC9-229ENST00000622668 MALRD1Q5VYJ5 2156 aa7.82□□□□□ -1.16
HDAC9-229ENST00000622668 RNF223E7ERA6 249 aa7.82□□□□□ -1.16
HDAC9-229ENST00000622668 SLC22A5O76082 557 aa7.82□□□□□ -1.16
HDAC9-229ENST00000622668 FREM3P0C091 2139 aa7.82□□□□□ -1.16
HDAC9-229ENST00000622668 TMEM11P17152 192 aa7.82□□□□□ -1.16
HDAC9-229ENST00000622668 PI3P19957 117 aa7.82□□□□□ -1.16
HDAC9-229ENST00000622668 LIMS1P48059 325 aa7.82□□□□□ -1.16
HDAC9-229ENST00000622668 SUB1P53999 127 aaKnown RBP eCLIP7.82□□□□□ -1.16
HDAC9-229ENST00000622668 RPL23AP62750 156 aaKnown RBP7.82□□□□□ -1.16
HDAC9-229ENST00000622668 ZNF816Q0VGE8 651 aaPredicted RBP7.82□□□□□ -1.16
HDAC9-229ENST00000622668 PSG7Q13046 419 aa7.82□□□□□ -1.16
HDAC9-229ENST00000622668 PDLIM3Q53GG5 364 aaPredicted RBP7.82□□□□□ -1.16
HDAC9-229ENST00000622668 C10orf128Q5T292 105 aa7.82□□□□□ -1.16
HDAC9-229ENST00000622668 SEH1LQ96EE3 360 aa7.82□□□□□ -1.16
HDAC9-229ENST00000622668 ARHGAP5-AS1Q96IT6 56 aa7.82□□□□□ -1.16
HDAC9-229ENST00000622668 ZNF714Q96N38 554 aa7.82□□□□□ -1.16
HDAC9-229ENST00000622668 RSRP1Q9BUV0 290 aa7.82□□□□□ -1.16
HDAC9-229ENST00000622668 FRRS1LQ9P0K9 344 aa7.82□□□□□ -1.16
HDAC9-229ENST00000622668 FOXJ3Q9UPW0 622 aa7.82□□□□□ -1.16
HDAC9-229ENST00000622668 GMEB1Q9Y692 573 aa7.82□□□□□ -1.16
HDAC9-229ENST00000622668 PHF3Q92576 2039 aaKnown RBP7.82□□□□□ -1.16
HDAC9-229ENST00000622668 GEMIN2O14893 280 aaKnown RBP7.82□□□□□ -1.16
HDAC9-229ENST00000622668 FCGR3BO75015 233 aa7.82□□□□□ -1.16
HDAC9-229ENST00000622668 TXNDC12O95881 172 aa7.82□□□□□ -1.16
HDAC9-229ENST00000622668 TTRP02766 147 aa7.82□□□□□ -1.16
HDAC9-229ENST00000622668 TNFSF8P32971 234 aa7.82□□□□□ -1.16
HDAC9-229ENST00000622668 PTGDSP41222 190 aa7.82□□□□□ -1.16
HDAC9-229ENST00000622668 CD83Q01151 205 aa7.82□□□□□ -1.16
HDAC9-229ENST00000622668 PDZK1IP1Q13113 114 aa7.82□□□□□ -1.16
HDAC9-229ENST00000622668 FNDC7Q5VTL7 733 aa7.82□□□□□ -1.16
HDAC9-229ENST00000622668 GDPD1Q8N9F7 314 aa7.82□□□□□ -1.16
HDAC9-229ENST00000622668 POM121Q96HA1 1249 aa7.82□□□□□ -1.16
HDAC9-229ENST00000622668 MEGF10Q96KG7 1140 aa7.82□□□□□ -1.16
HDAC9-229ENST00000622668 SLX1AQ9BQ83 275 aa7.82□□□□□ -1.16
HDAC9-229ENST00000622668 DPCDQ9BVM2 203 aaPredicted RBP7.82□□□□□ -1.16
HDAC9-229ENST00000622668 CHST5Q9GZS9 411 aa7.82□□□□□ -1.16
HDAC9-229ENST00000622668 CNTD2Q9H8S5 307 aa7.82□□□□□ -1.16
HDAC9-229ENST00000622668 PITPNC1Q9UKF7 332 aa7.82□□□□□ -1.16
HDAC9-229ENST00000622668 IGHV3-72A0A0B4J1Y9 119 aa7.81□□□□□ -1.16
HDAC9-229ENST00000622668 ST8SIA5O15466 376 aa7.81□□□□□ -1.16
HDAC9-229ENST00000622668 LIPFP07098 398 aa7.81□□□□□ -1.16
HDAC9-229ENST00000622668 GIFP27352 417 aa7.81□□□□□ -1.16
HDAC9-229ENST00000622668 CEBPDP49716 269 aaPredicted RBP7.81□□□□□ -1.16
HDAC9-229ENST00000622668 EFNA4P52798 201 aa7.81□□□□□ -1.16
HDAC9-229ENST00000622668 CEACAM21Q3KPI0 293 aa7.81□□□□□ -1.16
HDAC9-229ENST00000622668 SLC25A30Q5SVS4 291 aa7.81□□□□□ -1.16
HDAC9-229ENST00000622668 EIF5AL1Q6IS14 154 aaKnown RBP7.81□□□□□ -1.16
HDAC9-229ENST00000622668 ARHGEF39Q8N4T4 335 aa7.81□□□□□ -1.16
HDAC9-229ENST00000622668 HPSE2Q8WWQ2 592 aa7.81□□□□□ -1.16
HDAC9-229ENST00000622668 LHX4Q969G2 390 aa7.81□□□□□ -1.16
HDAC9-229ENST00000622668 GPX7Q96SL4 187 aaPredicted RBP7.81□□□□□ -1.16
HDAC9-229ENST00000622668 KLHDC3Q9BQ90 382 aa7.81□□□□□ -1.16
HDAC9-229ENST00000622668 PRORYQ9H606 182 aa7.81□□□□□ -1.16
HDAC9-229ENST00000622668 TAF9BQ9HBM6 251 aa7.81□□□□□ -1.16
HDAC9-229ENST00000622668 GCM1Q9NP62 436 aa7.81□□□□□ -1.16
HDAC9-229ENST00000622668 MRPL22Q9NWU5 206 aaKnown RBP7.81□□□□□ -1.16
HDAC9-229ENST00000622668 KLHDC2Q9Y2U9 406 aa7.81□□□□□ -1.16
HDAC9-229ENST00000622668 BORCS7-ASMTA0A0B4J1R7 106 aa7.81□□□□□ -1.16
HDAC9-229ENST00000622668 IGHV1-18A0A0C4DH31 117 aa7.81□□□□□ -1.16
HDAC9-229ENST00000622668 OOEPA6NGQ2 149 aa7.81□□□□□ -1.16
HDAC9-229ENST00000622668 A6NNC1 897 aa7.81□□□□□ -1.16
HDAC9-229ENST00000622668 GABARAPH6UMI1 98 aa7.81□□□□□ -1.16
HDAC9-229ENST00000622668 TSPAN4O14817 238 aa7.81□□□□□ -1.16
HDAC9-229ENST00000622668 MGST3O14880 152 aa7.81□□□□□ -1.16
HDAC9-229ENST00000622668 SEMA7AO75326 666 aa7.81□□□□□ -1.16
HDAC9-229ENST00000622668 GABARAPO95166 117 aa7.81□□□□□ -1.16
HDAC9-229ENST00000622668 CLEC3BP05452 202 aa7.81□□□□□ -1.16
HDAC9-229ENST00000622668 USF1P22415 310 aaPredicted RBP7.81□□□□□ -1.16
HDAC9-229ENST00000622668 ZNF85Q03923 595 aa7.81□□□□□ -1.16
HDAC9-229ENST00000622668 INSL4Q14641 139 aa7.81□□□□□ -1.16
HDAC9-229ENST00000622668 S100A7AQ86SG5 101 aa7.81□□□□□ -1.16
HDAC9-229ENST00000622668 LAX1Q8IWV1 398 aa7.81□□□□□ -1.16
HDAC9-229ENST00000622668 NEUROG1Q92886 237 aa7.81□□□□□ -1.16
HDAC9-229ENST00000622668 TMEM54Q969K7 222 aa7.81□□□□□ -1.16
HDAC9-229ENST00000622668 IGKV1D-43A0A0B4J1Z2 117 aa7.81□□□□□ -1.16
HDAC9-229ENST00000622668 SERPINE3A8MV23 424 aa7.81□□□□□ -1.16
HDAC9-229ENST00000622668 H3BMQ9 156 aa7.81□□□□□ -1.16
HDAC9-229ENST00000622668 LYRM1O43325 122 aa7.81□□□□□ -1.16
HDAC9-229ENST00000622668 SYNGR1O43759 233 aa7.81□□□□□ -1.16
HDAC9-229ENST00000622668 KRASP01116 189 aa7.81□□□□□ -1.16
HDAC9-229ENST00000622668 OPN1MWP04001 364 aa7.81□□□□□ -1.16
HDAC9-229ENST00000622668 OPN1MW2P0DN77 364 aa7.81□□□□□ -1.16
HDAC9-229ENST00000622668 OPN1MW3P0DN78 364 aa7.81□□□□□ -1.16
HDAC9-229ENST00000622668 ANXA7P20073 488 aaKnown RBP7.81□□□□□ -1.16
HDAC9-229ENST00000622668 RPS19P39019 145 aaKnown RBP7.81□□□□□ -1.16
HDAC9-229ENST00000622668 OPRL1P41146 370 aa7.81□□□□□ -1.16
HDAC9-229ENST00000622668 ZFP69Q49AA0 526 aa7.81□□□□□ -1.16
HDAC9-229ENST00000622668 TRAT1Q6PIZ9 186 aa7.81□□□□□ -1.16
HDAC9-229ENST00000622668 MOB1BQ7L9L4 216 aa7.81□□□□□ -1.16
HDAC9-229ENST00000622668 ADAT3Q96EY9 351 aaPredicted RBP7.81□□□□□ -1.16
HDAC9-229ENST00000622668 SSBP3Q9BWW4 388 aaPredicted RBP7.81□□□□□ -1.16
HDAC9-229ENST00000622668 OR4C45A6NMZ5 311 aa7.81□□□□□ -1.16
HDAC9-229ENST00000622668 GPR137BO60478 399 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms