RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 DBX1A6NMT0 343 aa6.11□□□□□ -1.43
SRGAP3-213ENST00000618999 SHISA8B8ZZ34 492 aa6.11□□□□□ -1.43
SRGAP3-213ENST00000618999 GPR137BO60478 399 aa6.11□□□□□ -1.43
SRGAP3-213ENST00000618999 OR5H8P0DN80 308 aa6.11□□□□□ -1.43
SRGAP3-213ENST00000618999 ZNF133P52736 654 aaPredicted RBP6.11□□□□□ -1.43
SRGAP3-213ENST00000618999 PIGPP57054 158 aa6.11□□□□□ -1.43
SRGAP3-213ENST00000618999 CLINT1Q14677 625 aa6.11□□□□□ -1.43
SRGAP3-213ENST00000618999 PCK2Q16822 640 aa6.11□□□□□ -1.43
SRGAP3-213ENST00000618999 SPIN3Q5JUX0 258 aa6.11□□□□□ -1.43
SRGAP3-213ENST00000618999 AKR1C8PQ5T2L2 129 aa6.11□□□□□ -1.43
SRGAP3-213ENST00000618999 BTNL8Q6UX41 500 aa6.11□□□□□ -1.43
SRGAP3-213ENST00000618999 LGI3Q8N145 548 aa6.11□□□□□ -1.43
SRGAP3-213ENST00000618999 ZNF610Q8N9Z0 462 aa6.11□□□□□ -1.43
SRGAP3-213ENST00000618999 OR14K1Q8NGZ2 314 aa6.11□□□□□ -1.43
SRGAP3-213ENST00000618999 THOC3Q96J01 351 aaKnown RBP6.11□□□□□ -1.43
SRGAP3-213ENST00000618999 GPR87Q9BY21 358 aa6.11□□□□□ -1.43
SRGAP3-213ENST00000618999 FAM206AQ9NX38 181 aa6.11□□□□□ -1.43
SRGAP3-213ENST00000618999 URGCP-MRPS24S4R325 110 aa6.11□□□□□ -1.43
SRGAP3-213ENST00000618999 LOC101059948A0A1B0GTJ6 334 aa6.1□□□□□ -1.43
SRGAP3-213ENST00000618999 TSTD3H0UI37 97 aa6.1□□□□□ -1.43
SRGAP3-213ENST00000618999 H7C1Q1 480 aa6.1□□□□□ -1.43
SRGAP3-213ENST00000618999 RAD51DO75771 328 aa6.1□□□□□ -1.43
SRGAP3-213ENST00000618999 CD5P06127 495 aa6.1□□□□□ -1.43
SRGAP3-213ENST00000618999 SEC11BP0C7V7 166 aa6.1□□□□□ -1.43
SRGAP3-213ENST00000618999 DUSP1P28562 367 aa6.1□□□□□ -1.43
SRGAP3-213ENST00000618999 GRB2P62993 217 aaKnown RBP6.1□□□□□ -1.43
SRGAP3-213ENST00000618999 MST1LQ2TV78 715 aa6.1□□□□□ -1.43
SRGAP3-213ENST00000618999 SSX9Q7RTT3 188 aa6.1□□□□□ -1.43
SRGAP3-213ENST00000618999 BHLHE23Q8NDY6 225 aa6.1□□□□□ -1.43
SRGAP3-213ENST00000618999 NIPSNAP3BQ9BS92 247 aa6.1□□□□□ -1.43
SRGAP3-213ENST00000618999 OPA3Q9H6K4 179 aa6.1□□□□□ -1.43
SRGAP3-213ENST00000618999 RNF122Q9H9V4 155 aa6.1□□□□□ -1.43
SRGAP3-213ENST00000618999 UFSP2Q9NUQ7 469 aa6.1□□□□□ -1.43
SRGAP3-213ENST00000618999 NECAP2Q9NVZ3 263 aa6.1□□□□□ -1.43
SRGAP3-213ENST00000618999 MMP24Q9Y5R2 645 aa6.1□□□□□ -1.43
SRGAP3-213ENST00000618999 A0A1W2PP11 408 aa6.1□□□□□ -1.43
SRGAP3-213ENST00000618999 C21orf140B9A014 251 aa6.1□□□□□ -1.43
SRGAP3-213ENST00000618999 DEDDO75618 318 aa6.1□□□□□ -1.43
SRGAP3-213ENST00000618999 GLI4P10075 376 aa6.1□□□□□ -1.43
SRGAP3-213ENST00000618999 NBL1P41271 181 aa6.1□□□□□ -1.43
SRGAP3-213ENST00000618999 USF2Q15853 346 aaPredicted RBP6.1□□□□□ -1.43
SRGAP3-213ENST00000618999 PHLDA2Q53GA4 152 aa6.1□□□□□ -1.43
SRGAP3-213ENST00000618999 C9orf152Q5JTZ5 239 aa6.1□□□□□ -1.43
SRGAP3-213ENST00000618999 ABHD17BQ5VST6 288 aa6.1□□□□□ -1.43
SRGAP3-213ENST00000618999 C8orf86Q6ZUL3 223 aa6.1□□□□□ -1.43
SRGAP3-213ENST00000618999 OR2G3Q8NGZ4 309 aa6.1□□□□□ -1.43
SRGAP3-213ENST00000618999 RTN4IP1Q8WWV3 396 aaPredicted RBP6.1□□□□□ -1.43
SRGAP3-213ENST00000618999 PIGTQ969N2 578 aa6.1□□□□□ -1.43
SRGAP3-213ENST00000618999 TMEM230Q96A57 120 aa6.1□□□□□ -1.43
SRGAP3-213ENST00000618999 ZNF524Q96C55 264 aa6.1□□□□□ -1.43
SRGAP3-213ENST00000618999 C1orf159Q96HA4 380 aa6.1□□□□□ -1.43
SRGAP3-213ENST00000618999 IP6K3Q96PC2 410 aa6.1□□□□□ -1.43
SRGAP3-213ENST00000618999 RBM14Q96PK6 669 aaKnown RBP6.1□□□□□ -1.43
SRGAP3-213ENST00000618999 SPIN2AQ99865 258 aa6.1□□□□□ -1.43
SRGAP3-213ENST00000618999 SPIN2BQ9BPZ2 258 aa6.1□□□□□ -1.43
SRGAP3-213ENST00000618999 ALKBH4Q9NXW9 302 aa6.1□□□□□ -1.43
SRGAP3-213ENST00000618999 UBE2J1Q9Y385 318 aaPredicted RBP6.1□□□□□ -1.43
SRGAP3-213ENST00000618999 CFAP54Q96N23 3096 aa6.1□□□□□ -1.43
SRGAP3-213ENST00000618999 P04436 131 aa6.1□□□□□ -1.43
SRGAP3-213ENST00000618999 SERPINA7P05543 415 aa6.1□□□□□ -1.43
SRGAP3-213ENST00000618999 FCGR3AP08637 254 aa6.1□□□□□ -1.43
SRGAP3-213ENST00000618999 ZNF708P17019 499 aa6.1□□□□□ -1.43
SRGAP3-213ENST00000618999 PAX6P26367 422 aa6.1□□□□□ -1.43
SRGAP3-213ENST00000618999 S100GP29377 79 aa6.1□□□□□ -1.43
SRGAP3-213ENST00000618999 SFTPDP35247 375 aa6.1□□□□□ -1.43
SRGAP3-213ENST00000618999 ID3Q02535 119 aa6.1□□□□□ -1.43
SRGAP3-213ENST00000618999 KISS1Q15726 138 aa6.1□□□□□ -1.43
SRGAP3-213ENST00000618999 SP6Q3SY56 376 aa6.1□□□□□ -1.43
SRGAP3-213ENST00000618999 GPR157Q5UAW9 335 aa6.1□□□□□ -1.43
SRGAP3-213ENST00000618999 CLEC9AQ6UXN8 241 aa6.1□□□□□ -1.43
SRGAP3-213ENST00000618999 UBAC2Q8NBM4 344 aa6.1□□□□□ -1.43
SRGAP3-213ENST00000618999 OR8B12Q8NGG6 310 aa6.1□□□□□ -1.43
SRGAP3-213ENST00000618999 OR14L1PQ8NHC6 308 aa6.1□□□□□ -1.43
SRGAP3-213ENST00000618999 METTL9Q9H1A3 318 aa6.1□□□□□ -1.43
SRGAP3-213ENST00000618999 ZMAT4Q9H898 229 aa6.1□□□□□ -1.43
SRGAP3-213ENST00000618999 SH3BGRL2Q9UJC5 107 aa6.1□□□□□ -1.43
SRGAP3-213ENST00000618999 TIMM10BQ9Y5J6 103 aa6.1□□□□□ -1.43
SRGAP3-213ENST00000618999 MED12Q93074 2177 aa6.1□□□□□ -1.43
SRGAP3-213ENST00000618999 ANKUB1A6NFN9 424 aa6.09□□□□□ -1.43
SRGAP3-213ENST00000618999 PHF1O43189 567 aaPredicted RBP6.09□□□□□ -1.43
SRGAP3-213ENST00000618999 DNPH1O43598 174 aa6.09□□□□□ -1.43
SRGAP3-213ENST00000618999 CLN5O75503 358 aa6.09□□□□□ -1.43
SRGAP3-213ENST00000618999 IGHMP01871 453 aa6.09□□□□□ -1.43
SRGAP3-213ENST00000618999 CTSDP07339 412 aaPredicted RBP6.09□□□□□ -1.43
SRGAP3-213ENST00000618999 OMGP23515 440 aa6.09□□□□□ -1.43
SRGAP3-213ENST00000618999 G0S2P27469 103 aa6.09□□□□□ -1.43
SRGAP3-213ENST00000618999 SNCAP37840 140 aa6.09□□□□□ -1.43
SRGAP3-213ENST00000618999 MTCP1P56278 107 aa6.09□□□□□ -1.43
SRGAP3-213ENST00000618999 PLAC9Q5JTB6 97 aa6.09□□□□□ -1.43
SRGAP3-213ENST00000618999 ACER2Q5QJU3 275 aa6.09□□□□□ -1.43
SRGAP3-213ENST00000618999 NSUN5P2Q63ZY6 315 aa6.09□□□□□ -1.43
SRGAP3-213ENST00000618999 PLXDC2Q6UX71 529 aa6.09□□□□□ -1.43
SRGAP3-213ENST00000618999 LINC00696Q6ZRV3 163 aa6.09□□□□□ -1.43
SRGAP3-213ENST00000618999 OR5L1Q8NGL2 311 aa6.09□□□□□ -1.43
SRGAP3-213ENST00000618999 MRPL24Q96A35 216 aaKnown RBP6.09□□□□□ -1.43
SRGAP3-213ENST00000618999 GNRHR2Q96P88 292 aa6.09□□□□□ -1.43
SRGAP3-213ENST00000618999 BCL2L14Q9BZR8 327 aa6.09□□□□□ -1.43
SRGAP3-213ENST00000618999 SLC25A31Q9H0C2 315 aa6.09□□□□□ -1.43
SRGAP3-213ENST00000618999 ZNF587BE7ETH6 402 aa6.09□□□□□ -1.43
SRGAP3-213ENST00000618999 CCL3P10147 92 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms