RNA–Protein interactions for RNA: ENST00000607092.1

CUX1-220, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 559 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-220ENST00000607092 C9orf66Q5T8R8 295 aa5.02□□□□□ -1.61
CUX1-220ENST00000607092 HEPN1Q6WQI6 88 aa5.02□□□□□ -1.61
CUX1-220ENST00000607092 EGFL6Q8IUX8 553 aa5.02□□□□□ -1.61
CUX1-220ENST00000607092 CPOQ8IVL8 374 aa5.02□□□□□ -1.61
CUX1-220ENST00000607092 FOXRED2Q8IWF2 684 aa5.02□□□□□ -1.61
CUX1-220ENST00000607092 ELMOD2Q8IZ81 293 aa5.02□□□□□ -1.61
CUX1-220ENST00000607092 DYNAPQ8N1N2 210 aa5.02□□□□□ -1.61
CUX1-220ENST00000607092 ABHD12Q8N2K0 398 aa5.02□□□□□ -1.61
CUX1-220ENST00000607092 DNAAF1Q8NEP3 725 aa5.02□□□□□ -1.61
CUX1-220ENST00000607092 OR4D6Q8NGJ1 314 aa5.02□□□□□ -1.61
CUX1-220ENST00000607092 OR5M8Q8NGP6 311 aa5.02□□□□□ -1.61
CUX1-220ENST00000607092 PP6455Q8WZ26 134 aa5.02□□□□□ -1.61
CUX1-220ENST00000607092 BORCS8Q96FH0 119 aa5.02□□□□□ -1.61
CUX1-220ENST00000607092 HRASLS5Q96KN8 279 aa5.02□□□□□ -1.61
CUX1-220ENST00000607092 LRGUKQ96M69 825 aa5.02□□□□□ -1.61
CUX1-220ENST00000607092 CNN2Q99439 309 aaKnown RBP5.02□□□□□ -1.61
CUX1-220ENST00000607092 TEAD3Q99594 435 aa5.02□□□□□ -1.61
CUX1-220ENST00000607092 ZNF649Q9BS31 505 aa5.02□□□□□ -1.61
CUX1-220ENST00000607092 FGF23Q9GZV9 251 aaPredicted RBP5.02□□□□□ -1.61
CUX1-220ENST00000607092 MED20Q9H944 212 aa5.02□□□□□ -1.61
CUX1-220ENST00000607092 C8orf4Q9NR00 106 aa5.02□□□□□ -1.61
CUX1-220ENST00000607092 BATF3Q9NR55 127 aa5.02□□□□□ -1.61
CUX1-220ENST00000607092 GTF2A1LQ9UNN4 478 aa5.02□□□□□ -1.61
CUX1-220ENST00000607092 MOB4Q9Y3A3 225 aa5.02□□□□□ -1.61
CUX1-220ENST00000607092 AP4S1Q9Y587 144 aa5.02□□□□□ -1.61
CUX1-220ENST00000607092 SNX5Q9Y5X3 404 aa5.02□□□□□ -1.61
CUX1-220ENST00000607092 HSPE1-MOB4S4R3N1 261 aa5.02□□□□□ -1.61
CUX1-220ENST00000607092 V9GYS6 101 aa5.02□□□□□ -1.61
CUX1-220ENST00000607092 DNAH9Q9NYC9 4486 aa5.01□□□□□ -1.61
CUX1-220ENST00000607092 SERPINE3A8MV23 424 aa5.01□□□□□ -1.61
CUX1-220ENST00000607092 ZNF670-ZNF695F2Z2N8 137 aa5.01□□□□□ -1.61
CUX1-220ENST00000607092 H3BNX3 289 aa5.01□□□□□ -1.61
CUX1-220ENST00000607092 LCE2BO14633 110 aa5.01□□□□□ -1.61
CUX1-220ENST00000607092 SH2D1BO14796 132 aa5.01□□□□□ -1.61
CUX1-220ENST00000607092 EIF4EBP3O60516 100 aaPredicted RBP5.01□□□□□ -1.61
CUX1-220ENST00000607092 HAND1O96004 215 aa5.01□□□□□ -1.61
CUX1-220ENST00000607092 CST1P01037 141 aa5.01□□□□□ -1.61
CUX1-220ENST00000607092 KRT8P05787 483 aa5.01□□□□□ -1.61
CUX1-220ENST00000607092 RPSAP08865 295 aaKnown RBP5.01□□□□□ -1.61
CUX1-220ENST00000607092 RAP2AP10114 183 aa5.01□□□□□ -1.61
CUX1-220ENST00000607092 FCGR1AP12314 374 aa5.01□□□□□ -1.61
CUX1-220ENST00000607092 ANXA8P13928 327 aa5.01□□□□□ -1.61
CUX1-220ENST00000607092 PRKACBP22694 351 aa5.01□□□□□ -1.61
CUX1-220ENST00000607092 HOXD3P31249 432 aaPredicted RBP5.01□□□□□ -1.61
CUX1-220ENST00000607092 OR3A4PP47883 348 aa5.01□□□□□ -1.61
CUX1-220ENST00000607092 CEBPDP49716 269 aaPredicted RBP5.01□□□□□ -1.61
CUX1-220ENST00000607092 RBP2P50120 134 aa5.01□□□□□ -1.61
CUX1-220ENST00000607092 INSL3P51460 131 aa5.01□□□□□ -1.61
CUX1-220ENST00000607092 KRTAP10-11P60412 298 aa5.01□□□□□ -1.61
CUX1-220ENST00000607092 RPL23AP62750 156 aaKnown RBP5.01□□□□□ -1.61
CUX1-220ENST00000607092 APOFQ13790 326 aa5.01□□□□□ -1.61
CUX1-220ENST00000607092 EDDM3AQ14507 147 aa5.01□□□□□ -1.61
CUX1-220ENST00000607092 ZNF146Q15072 292 aa5.01□□□□□ -1.61
CUX1-220ENST00000607092 TMEM95Q3KNT9 176 aa5.01□□□□□ -1.61
CUX1-220ENST00000607092 TCTEX1D4Q5JR98 221 aa5.01□□□□□ -1.61
CUX1-220ENST00000607092 C9orf152Q5JTZ5 239 aa5.01□□□□□ -1.61
CUX1-220ENST00000607092 TEX38Q6PEX7 206 aa5.01□□□□□ -1.61
CUX1-220ENST00000607092 ZNF322Q6U7Q0 402 aaPredicted RBP5.01□□□□□ -1.61
CUX1-220ENST00000607092 SLC16A12Q6ZSM3 486 aa5.01□□□□□ -1.61
CUX1-220ENST00000607092 OR2W3Q7Z3T1 314 aa5.01□□□□□ -1.61
CUX1-220ENST00000607092 SPATA24Q86W54 205 aa5.01□□□□□ -1.61
CUX1-220ENST00000607092 ZNF695Q8IW36 515 aa5.01□□□□□ -1.61
CUX1-220ENST00000607092 PQLC1Q8N2U9 271 aa5.01□□□□□ -1.61
CUX1-220ENST00000607092 CHST4Q8NCG5 386 aa5.01□□□□□ -1.61
CUX1-220ENST00000607092 OR4P4Q8NGL7 312 aa5.01□□□□□ -1.61
CUX1-220ENST00000607092 OR8U1Q8NH10 309 aa5.01□□□□□ -1.61
CUX1-220ENST00000607092 CORO2AQ92828 525 aa5.01□□□□□ -1.61
CUX1-220ENST00000607092 EMG1Q92979 244 aaKnown RBP5.01□□□□□ -1.61
CUX1-220ENST00000607092 RPEQ96AT9 228 aa5.01□□□□□ -1.61
CUX1-220ENST00000607092 CCDC124Q96CT7 223 aaKnown RBP5.01□□□□□ -1.61
CUX1-220ENST00000607092 ZNF488Q96MN9 340 aa5.01□□□□□ -1.61
CUX1-220ENST00000607092 NR1H4Q96RI1 486 aaPredicted RBP5.01□□□□□ -1.61
CUX1-220ENST00000607092 MYCBPQ99417 103 aaPredicted RBP5.01□□□□□ -1.61
CUX1-220ENST00000607092 FEVQ99581 238 aa5.01□□□□□ -1.61
CUX1-220ENST00000607092 ZNF184Q99676 751 aaPredicted RBP5.01□□□□□ -1.61
CUX1-220ENST00000607092 SLC25A19Q9HC21 320 aa5.01□□□□□ -1.61
CUX1-220ENST00000607092 GPR173Q9NS66 373 aa5.01□□□□□ -1.61
CUX1-220ENST00000607092 OR6C3Q9NZP0 311 aa5.01□□□□□ -1.61
CUX1-220ENST00000607092 H2AFY2Q9P0M6 372 aaPredicted RBP5.01□□□□□ -1.61
CUX1-220ENST00000607092 ENOPH1Q9UHY7 261 aa5.01□□□□□ -1.61
CUX1-220ENST00000607092 OR52A1Q9UKL2 312 aa5.01□□□□□ -1.61
CUX1-220ENST00000607092 R4GMQ9 66 aa5.01□□□□□ -1.61
CUX1-220ENST00000607092 U3KQV3 271 aa5.01□□□□□ -1.61
CUX1-220ENST00000607092 TRBV2A0A0J9YWF9 115 aa5□□□□□ -1.61
CUX1-220ENST00000607092 FAM230AA0A1W2PPH8 454 aa5□□□□□ -1.61
CUX1-220ENST00000607092 BUB1B-PAK6H3BSN5 160 aa5□□□□□ -1.61
CUX1-220ENST00000607092 AP4M1O00189 453 aa5□□□□□ -1.61
CUX1-220ENST00000607092 SYT7O43581 403 aa5□□□□□ -1.61
CUX1-220ENST00000607092 IGLV1-47P01700 117 aa5□□□□□ -1.61
CUX1-220ENST00000607092 TTRP02766 147 aa5□□□□□ -1.61
CUX1-220ENST00000607092 CSN2P05814 226 aa5□□□□□ -1.61
CUX1-220ENST00000607092 OCM2P0CE71 109 aa5□□□□□ -1.61
CUX1-220ENST00000607092 OCMP0CE72 109 aaPredicted RBP5□□□□□ -1.61
CUX1-220ENST00000607092 UBCP0CG48 685 aaKnown RBP5□□□□□ -1.61
CUX1-220ENST00000607092 OR5H8P0DN80 308 aa5□□□□□ -1.61
CUX1-220ENST00000607092 CCL1P22362 96 aa5□□□□□ -1.61
CUX1-220ENST00000607092 CDK2P24941 298 aa5□□□□□ -1.61
CUX1-220ENST00000607092 CHATP28329 748 aa5□□□□□ -1.61
CUX1-220ENST00000607092 PTGFRP43088 359 aa5□□□□□ -1.61
CUX1-220ENST00000607092 HSPA13P48723 471 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms