RNA–Protein interactions for RNA: ENST00000600970.5

USE1-208, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 5

Gene USE1, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-208ENST00000600970 FAM90A12PA8MX19 464 aa13.22□□□□□ -0.29
USE1-208ENST00000600970 FAM90A5PA8MXJ8 464 aa13.22□□□□□ -0.29
USE1-208ENST00000600970 OOSP1A8MZH6 123 aa13.22□□□□□ -0.29
USE1-208ENST00000600970 H3BSH0 61 aa13.22□□□□□ -0.29
USE1-208ENST00000600970 CCL24O00175 119 aa13.22□□□□□ -0.29
USE1-208ENST00000600970 TOR1AO14656 332 aa13.22□□□□□ -0.29
USE1-208ENST00000600970 FAM90A15PP0C7V4 464 aa13.22□□□□□ -0.29
USE1-208ENST00000600970 FAM90A13PP0C7W8 464 aa13.22□□□□□ -0.29
USE1-208ENST00000600970 FAM90A14PP0C7W9 464 aa13.22□□□□□ -0.29
USE1-208ENST00000600970 FAM90A24PP0C7X0 464 aa13.22□□□□□ -0.29
USE1-208ENST00000600970 CALCBP10092 127 aa13.22□□□□□ -0.29
USE1-208ENST00000600970 RAP2AP10114 183 aa13.22□□□□□ -0.29
USE1-208ENST00000600970 BCL3P20749 454 aa13.22□□□□□ -0.29
USE1-208ENST00000600970 GP2P55259 537 aaKnown RBP13.22□□□□□ -0.29
USE1-208ENST00000600970 RAB25P57735 213 aa13.22□□□□□ -0.29
USE1-208ENST00000600970 ACTR3P61158 418 aa13.22□□□□□ -0.29
USE1-208ENST00000600970 THNSL2Q86YJ6 484 aa13.22□□□□□ -0.29
USE1-208ENST00000600970 ZNF695Q8IW36 515 aa13.22□□□□□ -0.29
USE1-208ENST00000600970 Q8IYB0 196 aa13.22□□□□□ -0.29
USE1-208ENST00000600970 C5orf56Q8N8D9 126 aa13.22□□□□□ -0.29
USE1-208ENST00000600970 BORCS8Q96FH0 119 aa13.22□□□□□ -0.29
USE1-208ENST00000600970 CNN2Q99439 309 aaKnown RBP13.22□□□□□ -0.29
USE1-208ENST00000600970 PLEKHA1Q9HB21 404 aa13.22□□□□□ -0.29
USE1-208ENST00000600970 TVP23BQ9NYZ1 205 aa13.22□□□□□ -0.29
USE1-208ENST00000600970 GLS2Q9UI32 602 aa13.22□□□□□ -0.29
USE1-208ENST00000600970 KIAA2026Q5HYC2 2103 aa13.21□□□□□ -0.29
USE1-208ENST00000600970 TRBV2A0A0J9YWF9 115 aa13.21□□□□□ -0.29
USE1-208ENST00000600970 SERPINE3A8MV23 424 aa13.21□□□□□ -0.29
USE1-208ENST00000600970 SIRPB1O00241 398 aa13.21□□□□□ -0.29
USE1-208ENST00000600970 SNX3O60493 162 aa13.21□□□□□ -0.29
USE1-208ENST00000600970 ENTPD6O75354 484 aa13.21□□□□□ -0.29
USE1-208ENST00000600970 PRKACAP17612 351 aa13.21□□□□□ -0.29
USE1-208ENST00000600970 PRRX1P54821 245 aa13.21□□□□□ -0.29
USE1-208ENST00000600970 SNU13P55769 128 aaKnown RBP13.21□□□□□ -0.29
USE1-208ENST00000600970 MS4A2Q01362 244 aa13.21□□□□□ -0.29
USE1-208ENST00000600970 RBM39Q14498 530 aaKnown RBP13.21□□□□□ -0.29
USE1-208ENST00000600970 KPNB1Q14974 876 aaKnown RBP13.21□□□□□ -0.29
USE1-208ENST00000600970 ODF4Q2M2E3 257 aa13.21□□□□□ -0.29
USE1-208ENST00000600970 UTF1Q5T230 341 aa13.21□□□□□ -0.29
USE1-208ENST00000600970 C9orf66Q5T8R8 295 aa13.21□□□□□ -0.29
USE1-208ENST00000600970 HS3ST5Q8IZT8 346 aa13.21□□□□□ -0.29
USE1-208ENST00000600970 FAM58AQ8N1B3 248 aa13.21□□□□□ -0.29
USE1-208ENST00000600970 COMMD1Q8N668 190 aa13.21□□□□□ -0.29
USE1-208ENST00000600970 ZNF556Q9HAH1 456 aa13.21□□□□□ -0.29
USE1-208ENST00000600970 MRM2Q9UI43 246 aaKnown RBP13.21□□□□□ -0.29
USE1-208ENST00000600970 DNAH7Q8WXX0 4024 aa13.21□□□□□ -0.3
USE1-208ENST00000600970 A0A087X0M5 115 aa13.2□□□□□ -0.3
USE1-208ENST00000600970 A0A1B0GX30 115 aa13.2□□□□□ -0.3
USE1-208ENST00000600970 GATBO75879 557 aaKnown RBP13.2□□□□□ -0.3
USE1-208ENST00000600970 PRKACGP22612 351 aa13.2□□□□□ -0.3
USE1-208ENST00000600970 CHATP28329 748 aa13.2□□□□□ -0.3
USE1-208ENST00000600970 ECI1P42126 302 aa13.2□□□□□ -0.3
USE1-208ENST00000600970 GLIPR1P48060 266 aa13.2□□□□□ -0.3
USE1-208ENST00000600970 CDC42P60953 191 aa13.2□□□□□ -0.3
USE1-208ENST00000600970 SLC35B1P78383 322 aa13.2□□□□□ -0.3
USE1-208ENST00000600970 AESQ08117 197 aa13.2□□□□□ -0.3
USE1-208ENST00000600970 SPIN3Q5JUX0 258 aa13.2□□□□□ -0.3
USE1-208ENST00000600970 SLC35F2Q8IXU6 374 aa13.2□□□□□ -0.3
USE1-208ENST00000600970 TEX12Q9BXU0 123 aa13.2□□□□□ -0.3
USE1-208ENST00000600970 CHST5Q9GZS9 411 aa13.2□□□□□ -0.3
USE1-208ENST00000600970 FAM107BQ9H098 131 aa13.2□□□□□ -0.3
USE1-208ENST00000600970 SYT7O43581 403 aa13.19□□□□□ -0.3
USE1-208ENST00000600970 RPP14O95059 124 aaKnown RBP13.19□□□□□ -0.3
USE1-208ENST00000600970 PTGFRP43088 359 aa13.19□□□□□ -0.3
USE1-208ENST00000600970 TRIM25Q14258 630 aaKnown RBP13.19□□□□□ -0.3
USE1-208ENST00000600970 BCDIN3DQ7Z5W3 292 aaKnown RBP13.19□□□□□ -0.3
USE1-208ENST00000600970 SLC35E3Q7Z769 313 aa13.19□□□□□ -0.3
USE1-208ENST00000600970 STPG2Q8N412 459 aa13.19□□□□□ -0.3
USE1-208ENST00000600970 OR4D6Q8NGJ1 314 aa13.19□□□□□ -0.3
USE1-208ENST00000600970 OR5M8Q8NGP6 311 aa13.19□□□□□ -0.3
USE1-208ENST00000600970 OR56B4Q8NH76 319 aa13.19□□□□□ -0.3
USE1-208ENST00000600970 TOMM40LQ969M1 308 aa13.19□□□□□ -0.3
USE1-208ENST00000600970 RPEQ96AT9 228 aa13.19□□□□□ -0.3
USE1-208ENST00000600970 MNTQ99583 582 aa13.19□□□□□ -0.3
USE1-208ENST00000600970 ZNF446Q9NWS9 450 aa13.19□□□□□ -0.3
USE1-208ENST00000600970 GAR1Q9NY12 217 aaKnown RBP13.19□□□□□ -0.3
USE1-208ENST00000600970 SCOCQ9UIL1 159 aa13.19□□□□□ -0.3
USE1-208ENST00000600970 FUOMA2VDF0 154 aa13.18□□□□□ -0.3
USE1-208ENST00000600970 ZNF670-ZNF695F2Z2N8 137 aa13.18□□□□□ -0.3
USE1-208ENST00000600970 GNGT2O14610 69 aa13.18□□□□□ -0.3
USE1-208ENST00000600970 SH2D1BO14796 132 aa13.18□□□□□ -0.3
USE1-208ENST00000600970 FGF16O43320 207 aa13.18□□□□□ -0.3
USE1-208ENST00000600970 PRKYO43930 277 aa13.18□□□□□ -0.3
USE1-208ENST00000600970 OR2H2O95918 312 aa13.18□□□□□ -0.3
USE1-208ENST00000600970 IGHG2P01859 326 aa13.18□□□□□ -0.3
USE1-208ENST00000600970 TMEM11P17152 192 aa13.18□□□□□ -0.3
USE1-208ENST00000600970 POU3F4P49335 361 aa13.18□□□□□ -0.3
USE1-208ENST00000600970 RBP2P50120 134 aa13.18□□□□□ -0.3
USE1-208ENST00000600970 ATP1B3P54709 279 aa13.18□□□□□ -0.3
USE1-208ENST00000600970 HES1Q14469 280 aa13.18□□□□□ -0.3
USE1-208ENST00000600970 C17orf58Q2M2W7 97 aa13.18□□□□□ -0.3
USE1-208ENST00000600970 DEFB136Q30KP8 78 aa13.18□□□□□ -0.3
USE1-208ENST00000600970 MEPCEQ7L2J0 689 aaKnown RBP13.18□□□□□ -0.3
USE1-208ENST00000600970 CATSPERDQ86XM0 798 aa13.18□□□□□ -0.3
USE1-208ENST00000600970 Q8NFD4 153 aa13.18□□□□□ -0.3
USE1-208ENST00000600970 DCLRE1BQ9H816 532 aa13.18□□□□□ -0.3
USE1-208ENST00000600970 ADGRL4Q9HBW9 690 aa13.18□□□□□ -0.3
USE1-208ENST00000600970 HMG20AQ9NP66 347 aa13.18□□□□□ -0.3
USE1-208ENST00000600970 EXOSC4Q9NPD3 245 aaKnown RBP13.18□□□□□ -0.3
USE1-208ENST00000600970 PCDHB16Q9NRJ7 776 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms