RNA–Protein interactions for RNA: ENST00000600320.5

SHKBP1-222, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-222ENST00000600320 OR5H6Q8NGV6 325 aa16.63■□□□□ 0.25
SHKBP1-222ENST00000600320 KCNG3Q8TAE7 436 aa16.63■□□□□ 0.25
SHKBP1-222ENST00000600320 MRPS24Q96EL2 167 aaKnown RBP16.63■□□□□ 0.25
SHKBP1-222ENST00000600320 Q96M66 194 aa16.63■□□□□ 0.25
SHKBP1-222ENST00000600320 FBLN5Q9UBX5 448 aa16.63■□□□□ 0.25
SHKBP1-222ENST00000600320 YLPM1P49750 1951 aaKnown RBP16.63■□□□□ 0.25
SHKBP1-222ENST00000600320 A0A0A6YYD4 124 aa16.62■□□□□ 0.25
SHKBP1-222ENST00000600320 KIAA1324LA8MWY0 1029 aaPredicted RBP16.62■□□□□ 0.25
SHKBP1-222ENST00000600320 SH2D1BO14796 132 aa16.62■□□□□ 0.25
SHKBP1-222ENST00000600320 DEGS1O15121 323 aa16.62■□□□□ 0.25
SHKBP1-222ENST00000600320 PHF1O43189 567 aaPredicted RBP16.62■□□□□ 0.25
SHKBP1-222ENST00000600320 PSPNO60542 156 aa16.62■□□□□ 0.25
SHKBP1-222ENST00000600320 ZNF44P15621 663 aa16.62■□□□□ 0.25
SHKBP1-222ENST00000600320 ZFP36P26651 326 aaKnown RBP16.62■□□□□ 0.25
SHKBP1-222ENST00000600320 EFNB2P52799 333 aa16.62■□□□□ 0.25
SHKBP1-222ENST00000600320 RPS27AP62979 156 aaKnown RBP16.62■□□□□ 0.25
SHKBP1-222ENST00000600320 WDR25Q64LD2 544 aaPredicted RBP16.62■□□□□ 0.25
SHKBP1-222ENST00000600320 NLRC3Q7RTR2 1065 aa16.62■□□□□ 0.25
SHKBP1-222ENST00000600320 BIVMQ86UB2 503 aa16.62■□□□□ 0.25
SHKBP1-222ENST00000600320 ZNF561Q8N587 486 aa16.62■□□□□ 0.25
SHKBP1-222ENST00000600320 TMEM185AQ8NFB2 350 aa16.62■□□□□ 0.25
SHKBP1-222ENST00000600320 LGALS14Q8TCE9 139 aa16.62■□□□□ 0.25
SHKBP1-222ENST00000600320 C1orf159Q96HA4 380 aa16.62■□□□□ 0.25
SHKBP1-222ENST00000600320 MED30Q96HR3 178 aa16.62■□□□□ 0.25
SHKBP1-222ENST00000600320 TM2D1Q9BX74 207 aa16.62■□□□□ 0.25
SHKBP1-222ENST00000600320 TMEM59Q9BXS4 323 aa16.62■□□□□ 0.25
SHKBP1-222ENST00000600320 LPAR5Q9H1C0 372 aa16.62■□□□□ 0.25
SHKBP1-222ENST00000600320 GLS2Q9UI32 602 aa16.62■□□□□ 0.25
SHKBP1-222ENST00000600320 ABCA2Q9BZC7 2435 aa16.61■□□□□ 0.25
SHKBP1-222ENST00000600320 TRAV24A0A0B4J272 114 aa16.61■□□□□ 0.25
SHKBP1-222ENST00000600320 SLC33A1O00400 549 aaPredicted RBP16.61■□□□□ 0.25
SHKBP1-222ENST00000600320 NDUFB3O43676 98 aa16.61■□□□□ 0.25
SHKBP1-222ENST00000600320 IGHV4-31P0DP07 118 aa16.61■□□□□ 0.25
SHKBP1-222ENST00000600320 LMO1P25800 156 aa16.61■□□□□ 0.25
SHKBP1-222ENST00000600320 FOXB2Q5VYV0 432 aa16.61■□□□□ 0.25
SHKBP1-222ENST00000600320 SIGIRRQ6IA17 410 aa16.61■□□□□ 0.25
SHKBP1-222ENST00000600320 C17orf107Q6ZR85 190 aa16.61■□□□□ 0.25
SHKBP1-222ENST00000600320 ASCC1Q8N9N2 400 aaKnown RBP16.61■□□□□ 0.25
SHKBP1-222ENST00000600320 OR4S1Q8NGB4 309 aa16.61■□□□□ 0.25
SHKBP1-222ENST00000600320 NICN1Q9BSH3 213 aa16.61■□□□□ 0.25
SHKBP1-222ENST00000600320 SSBP3Q9BWW4 388 aaPredicted RBP16.61■□□□□ 0.25
SHKBP1-222ENST00000600320 LPAR2Q9HBW0 351 aa16.61■□□□□ 0.25
SHKBP1-222ENST00000600320 RSL24D1Q9UHA3 163 aaKnown RBP16.61■□□□□ 0.25
SHKBP1-222ENST00000600320 MALRD1Q5VYJ5 2156 aa16.6■□□□□ 0.25
SHKBP1-222ENST00000600320 SMIM31A0A1B0GVY4 71 aa16.6■□□□□ 0.25
SHKBP1-222ENST00000600320 K7N7A8 449 aa16.6■□□□□ 0.25
SHKBP1-222ENST00000600320 OR7C1O76099 320 aaPredicted RBP16.6■□□□□ 0.25
SHKBP1-222ENST00000600320 CPT2P23786 658 aa16.6■□□□□ 0.25
SHKBP1-222ENST00000600320 GABRR1P24046 479 aa16.6■□□□□ 0.25
SHKBP1-222ENST00000600320 OR3A1P47881 315 aa16.6■□□□□ 0.25
SHKBP1-222ENST00000600320 GNB2P62879 340 aa16.6■□□□□ 0.25
SHKBP1-222ENST00000600320 MPV17LQ2QL34 196 aa16.6■□□□□ 0.25
SHKBP1-222ENST00000600320 ESCO2Q56NI9 601 aa16.6■□□□□ 0.25
SHKBP1-222ENST00000600320 RTN4RL2Q86UN3 420 aa16.6■□□□□ 0.25
SHKBP1-222ENST00000600320 CROCCP3Q8IVE0 287 aa16.6■□□□□ 0.25
SHKBP1-222ENST00000600320 DYNC2LI1Q8TCX1 351 aa16.6■□□□□ 0.25
SHKBP1-222ENST00000600320 ST8SIA4Q92187 359 aa16.6■□□□□ 0.25
SHKBP1-222ENST00000600320 SNX22Q96L94 193 aa16.6■□□□□ 0.25
SHKBP1-222ENST00000600320 TMUB1Q9BVT8 246 aa16.6■□□□□ 0.25
SHKBP1-222ENST00000600320 CHST6Q9GZX3 395 aa16.6■□□□□ 0.25
SHKBP1-222ENST00000600320 SHARPINQ9H0F6 387 aa16.6■□□□□ 0.25
SHKBP1-222ENST00000600320 SLC25A10Q9UBX3 287 aaPredicted RBP16.6■□□□□ 0.25
SHKBP1-222ENST00000600320 CLN8Q9UBY8 286 aa16.6■□□□□ 0.25
SHKBP1-222ENST00000600320 RAB22AQ9UL26 194 aa16.6■□□□□ 0.25
SHKBP1-222ENST00000600320 ARHGAP32A7KAX9 2087 aa16.59■□□□□ 0.25
SHKBP1-222ENST00000600320 A8MXK9 166 aa16.59■□□□□ 0.25
SHKBP1-222ENST00000600320 TK1P04183 234 aa16.59■□□□□ 0.25
SHKBP1-222ENST00000600320 HEXAP06865 529 aa16.59■□□□□ 0.25
SHKBP1-222ENST00000600320 RANBP1P43487 201 aa16.59■□□□□ 0.25
SHKBP1-222ENST00000600320 RORCP51449 518 aa16.59■□□□□ 0.25
SHKBP1-222ENST00000600320 LCN2P80188 198 aa16.59■□□□□ 0.25
SHKBP1-222ENST00000600320 LRRC10Q5BKY1 277 aa16.59■□□□□ 0.25
SHKBP1-222ENST00000600320 LINC00596Q86U02 117 aa16.59■□□□□ 0.25
SHKBP1-222ENST00000600320 MSI2Q96DH6 328 aaKnown RBP16.59■□□□□ 0.25
SHKBP1-222ENST00000600320 PPA2Q9H2U2 334 aa16.59■□□□□ 0.25
SHKBP1-222ENST00000600320 IFT22Q9H7X7 185 aa16.59■□□□□ 0.25
SHKBP1-222ENST00000600320 ABRACLQ9P1F3 81 aa16.59■□□□□ 0.25
SHKBP1-222ENST00000600320 ITPR3Q14573 2671 aa16.59■□□□□ 0.25
SHKBP1-222ENST00000600320 C22orf46C9J442 243 aa16.58■□□□□ 0.24
SHKBP1-222ENST00000600320 HSPB6O14558 160 aa16.58■□□□□ 0.24
SHKBP1-222ENST00000600320 FOXH1O75593 365 aa16.58■□□□□ 0.24
SHKBP1-222ENST00000600320 NDUFB7P17568 137 aa16.58■□□□□ 0.24
SHKBP1-222ENST00000600320 RAB6AP20340 208 aa16.58■□□□□ 0.24
SHKBP1-222ENST00000600320 NPY4RP50391 375 aa16.58■□□□□ 0.24
SHKBP1-222ENST00000600320 KRTAP1-1Q07627 177 aa16.58■□□□□ 0.24
SHKBP1-222ENST00000600320 ATAD3CQ5T2N8 411 aa16.58■□□□□ 0.24
SHKBP1-222ENST00000600320 BRICD5Q6PL45 260 aa16.58■□□□□ 0.24
SHKBP1-222ENST00000600320 SUMF2Q8NBJ7 301 aa16.58■□□□□ 0.24
SHKBP1-222ENST00000600320 CHST4Q8NCG5 386 aa16.58■□□□□ 0.24
SHKBP1-222ENST00000600320 SLC25A38Q96DW6 304 aa16.58■□□□□ 0.24
SHKBP1-222ENST00000600320 C18orf12Q96KH6 178 aa16.58■□□□□ 0.24
SHKBP1-222ENST00000600320 URM1Q9BTM9 101 aaKnown RBP16.58■□□□□ 0.24
SHKBP1-222ENST00000600320 FAM234AQ9H0X4 552 aa16.58■□□□□ 0.24
SHKBP1-222ENST00000600320 RCC2Q9P258 522 aaKnown RBP16.58■□□□□ 0.24
SHKBP1-222ENST00000600320 CELSR1Q9NYQ6 3014 aa16.57■□□□□ 0.24
SHKBP1-222ENST00000600320 FAM90A10PA6NDY2 464 aa16.57■□□□□ 0.24
SHKBP1-222ENST00000600320 FAM90A18PA6NE21 464 aa16.57■□□□□ 0.24
SHKBP1-222ENST00000600320 FAM90A16PA6NEW6 464 aa16.57■□□□□ 0.24
SHKBP1-222ENST00000600320 FAM90A20PA6NIJ5 464 aa16.57■□□□□ 0.24
SHKBP1-222ENST00000600320 FAM90A8PA6NJQ4 464 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms