RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 LGALS4P56470 323 aa15.23■□□□□ 0.03
PNKP-213ENST00000599543 SLC35A2P78381 396 aa15.23■□□□□ 0.03
PNKP-213ENST00000599543 MRPL28Q13084 256 aaKnown RBP15.23■□□□□ 0.03
PNKP-213ENST00000599543 AANATQ16613 207 aa15.23■□□□□ 0.03
PNKP-213ENST00000599543 CALHM1Q8IU99 346 aa15.23■□□□□ 0.03
PNKP-213ENST00000599543 RFT1Q96AA3 541 aa15.23■□□□□ 0.03
PNKP-213ENST00000599543 OR5M11Q96RB7 305 aa15.23■□□□□ 0.03
PNKP-213ENST00000599543 MEGF9Q9H1U4 602 aa15.23■□□□□ 0.03
PNKP-213ENST00000599543 HES4Q9HCC6 221 aa15.23■□□□□ 0.03
PNKP-213ENST00000599543 SLC7A11Q9UPY5 501 aa15.23■□□□□ 0.03
PNKP-213ENST00000599543 DHDHQ9UQ10 334 aa15.23■□□□□ 0.03
PNKP-213ENST00000599543 TPRKBQ9Y3C4 175 aa15.23■□□□□ 0.03
PNKP-213ENST00000599543 CCL3L1P16619 93 aa15.22■□□□□ 0.03
PNKP-213ENST00000599543 CRHBPP24387 322 aa15.22■□□□□ 0.03
PNKP-213ENST00000599543 MAP2K4P45985 399 aa15.22■□□□□ 0.03
PNKP-213ENST00000599543 WNT4P56705 351 aa15.22■□□□□ 0.03
PNKP-213ENST00000599543 ERVFRD-1P60508 538 aa15.22■□□□□ 0.03
PNKP-213ENST00000599543 Q6ZTK2 550 aa15.22■□□□□ 0.03
PNKP-213ENST00000599543 CCDC54Q8NEL0 328 aa15.22■□□□□ 0.03
PNKP-213ENST00000599543 PPP1R35Q8TAP8 253 aa15.22■□□□□ 0.03
PNKP-213ENST00000599543 FAM110DQ8TAY7 271 aaPredicted RBP15.22■□□□□ 0.03
PNKP-213ENST00000599543 RPS4Y2Q8TD47 263 aa15.22■□□□□ 0.03
PNKP-213ENST00000599543 AJUBAQ96IF1 538 aa15.22■□□□□ 0.03
PNKP-213ENST00000599543 NKX3-1Q99801 234 aaPredicted RBP15.22■□□□□ 0.03
PNKP-213ENST00000599543 PKIBQ9C010 78 aa15.22■□□□□ 0.03
PNKP-213ENST00000599543 ERGIC3Q9Y282 383 aa15.22■□□□□ 0.03
PNKP-213ENST00000599543 RGS10O43665 173 aa15.21■□□□□ 0.03
PNKP-213ENST00000599543 GATBO75879 557 aaKnown RBP15.21■□□□□ 0.03
PNKP-213ENST00000599543 SERPINA3P01011 423 aa15.21■□□□□ 0.03
PNKP-213ENST00000599543 RPSAP08865 295 aaKnown RBP15.21■□□□□ 0.03
PNKP-213ENST00000599543 CSF1P09603 554 aa15.21■□□□□ 0.03
PNKP-213ENST00000599543 ATF1P18846 271 aa15.21■□□□□ 0.03
PNKP-213ENST00000599543 AZGP1P25311 298 aaKnown RBP15.21■□□□□ 0.03
PNKP-213ENST00000599543 PAX6P26367 422 aa15.21■□□□□ 0.03
PNKP-213ENST00000599543 BMXP51813 675 aa15.21■□□□□ 0.03
PNKP-213ENST00000599543 IL24Q13007 206 aa15.21■□□□□ 0.03
PNKP-213ENST00000599543 ZNF273Q14593 569 aa15.21■□□□□ 0.03
PNKP-213ENST00000599543 CCDC58Q4VC31 144 aa15.21■□□□□ 0.03
PNKP-213ENST00000599543 DMKNQ6E0U4 476 aaPredicted RBP15.21■□□□□ 0.03
PNKP-213ENST00000599543 C11orf88Q6PI97 169 aa15.21■□□□□ 0.03
PNKP-213ENST00000599543 ZNF782Q6ZMW2 699 aaPredicted RBP15.21■□□□□ 0.03
PNKP-213ENST00000599543 LIAT1Q6ZQX7 453 aa15.21■□□□□ 0.03
PNKP-213ENST00000599543 EGFL6Q8IUX8 553 aa15.21■□□□□ 0.03
PNKP-213ENST00000599543 C11orf42Q8N5U0 333 aa15.21■□□□□ 0.03
PNKP-213ENST00000599543 ASCC1Q8N9N2 400 aaKnown RBP15.21■□□□□ 0.03
PNKP-213ENST00000599543 OR2T6Q8NHC8 308 aa15.21■□□□□ 0.03
PNKP-213ENST00000599543 PP6455Q8WZ26 134 aa15.21■□□□□ 0.03
PNKP-213ENST00000599543 GHSRQ92847 366 aa15.21■□□□□ 0.03
PNKP-213ENST00000599543 SMIM19Q96E16 107 aa15.21■□□□□ 0.03
PNKP-213ENST00000599543 DUSP21Q9H596 190 aa15.21■□□□□ 0.03
PNKP-213ENST00000599543 RANBP3Q9H6Z4 567 aaPredicted RBP15.21■□□□□ 0.03
PNKP-213ENST00000599543 SIGLEC9Q9Y336 463 aa15.21■□□□□ 0.03
PNKP-213ENST00000599543 OCM2P0CE71 109 aa15.2■□□□□ 0.02
PNKP-213ENST00000599543 OCMP0CE72 109 aaPredicted RBP15.2■□□□□ 0.02
PNKP-213ENST00000599543 CALCBP10092 127 aa15.2■□□□□ 0.02
PNKP-213ENST00000599543 CELP19835 753 aa15.2■□□□□ 0.02
PNKP-213ENST00000599543 POU3F4P49335 361 aa15.2■□□□□ 0.02
PNKP-213ENST00000599543 ERVK11-1P61568 191 aa15.2■□□□□ 0.02
PNKP-213ENST00000599543 COL10A1Q03692 680 aa15.2■□□□□ 0.02
PNKP-213ENST00000599543 IRF3Q14653 427 aa15.2■□□□□ 0.02
PNKP-213ENST00000599543 HERPUD1Q15011 391 aa15.2■□□□□ 0.02
PNKP-213ENST00000599543 CNN3Q15417 329 aaKnown RBP15.2■□□□□ 0.02
PNKP-213ENST00000599543 MED22Q15528 200 aa15.2■□□□□ 0.02
PNKP-213ENST00000599543 SLAMF9Q96A28 289 aa15.2■□□□□ 0.02
PNKP-213ENST00000599543 BORCS8Q96FH0 119 aa15.2■□□□□ 0.02
PNKP-213ENST00000599543 PGLYRP3Q96LB9 341 aa15.2■□□□□ 0.02
PNKP-213ENST00000599543 MND1Q9BWT6 205 aa15.2■□□□□ 0.02
PNKP-213ENST00000599543 CDCA4Q9BXL8 241 aa15.2■□□□□ 0.02
PNKP-213ENST00000599543 NPFFR1Q9GZQ6 430 aa15.2■□□□□ 0.02
PNKP-213ENST00000599543 TAS2R4Q9NYW5 299 aa15.2■□□□□ 0.02
PNKP-213ENST00000599543 ZNF281Q9Y2X9 895 aa15.2■□□□□ 0.02
PNKP-213ENST00000599543 LSM2Q9Y333 95 aaKnown RBP15.2■□□□□ 0.02
PNKP-213ENST00000599543 A0A1W2PPK0 400 aa15.19■□□□□ 0.02
PNKP-213ENST00000599543 K7N7A8 449 aa15.19■□□□□ 0.02
PNKP-213ENST00000599543 KIR2DS4P43632 304 aa15.19■□□□□ 0.02
PNKP-213ENST00000599543 FUT6P51993 359 aa15.19■□□□□ 0.02
PNKP-213ENST00000599543 EFNB2P52799 333 aa15.19■□□□□ 0.02
PNKP-213ENST00000599543 RBM48Q5RL73 367 aaKnown RBP15.19■□□□□ 0.02
PNKP-213ENST00000599543 GDPD3Q7L5L3 318 aa15.19■□□□□ 0.02
PNKP-213ENST00000599543 OR51A2Q8NGJ7 313 aa15.19■□□□□ 0.02
PNKP-213ENST00000599543 OR5D18Q8NGL1 313 aa15.19■□□□□ 0.02
PNKP-213ENST00000599543 HAVCR2Q8TDQ0 301 aa15.19■□□□□ 0.02
PNKP-213ENST00000599543 GPR148Q8TDV2 347 aa15.19■□□□□ 0.02
PNKP-213ENST00000599543 CEP19Q96LK0 163 aa15.19■□□□□ 0.02
PNKP-213ENST00000599543 Q9H521 79 aa15.19■□□□□ 0.02
PNKP-213ENST00000599543 ZCCHC4Q9H5U6 513 aa15.19■□□□□ 0.02
PNKP-213ENST00000599543 F8VVB4 439 aa15.18■□□□□ 0.02
PNKP-213ENST00000599543 F8VWA3 439 aa15.18■□□□□ 0.02
PNKP-213ENST00000599543 DENRO43583 198 aaKnown RBP15.18■□□□□ 0.02
PNKP-213ENST00000599543 CHRM2P08172 466 aa15.18■□□□□ 0.02
PNKP-213ENST00000599543 MTCP1P56278 107 aa15.18■□□□□ 0.02
PNKP-213ENST00000599543 EDDM3BP56851 147 aa15.18■□□□□ 0.02
PNKP-213ENST00000599543 RPS11P62280 158 aaKnown RBP eCLIP15.18■□□□□ 0.02
PNKP-213ENST00000599543 INSL4Q14641 139 aa15.18■□□□□ 0.02
PNKP-213ENST00000599543 CRIP3Q6Q6R5 217 aa15.18■□□□□ 0.02
PNKP-213ENST00000599543 SLC25A26Q70HW3 274 aa15.18■□□□□ 0.02
PNKP-213ENST00000599543 UTS2BQ765I0 119 aa15.18■□□□□ 0.02
PNKP-213ENST00000599543 DTX3Q8N9I9 347 aa15.18■□□□□ 0.02
PNKP-213ENST00000599543 C10orf35Q96D05 121 aa15.18■□□□□ 0.02
PNKP-213ENST00000599543 OPALINQ96PE5 141 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms