RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 RAB35Q15286 201 aa13.4□□□□□ -0.26
PNKP-204ENST00000594661 MIDNQ504T8 468 aa13.4□□□□□ -0.26
PNKP-204ENST00000594661 WIPI1Q5MNZ9 446 aaPredicted RBP13.4□□□□□ -0.26
PNKP-204ENST00000594661 DEGS2Q6QHC5 323 aa13.4□□□□□ -0.26
PNKP-204ENST00000594661 MRPL52Q86TS9 123 aaKnown RBP13.4□□□□□ -0.26
PNKP-204ENST00000594661 RNF133Q8WVZ7 376 aa13.4□□□□□ -0.26
PNKP-204ENST00000594661 KCNK15Q9H427 330 aa13.4□□□□□ -0.26
PNKP-204ENST00000594661 A0A1B0GW64 132 aa13.4□□□□□ -0.26
PNKP-204ENST00000594661 RAB27BO00194 218 aa13.4□□□□□ -0.26
PNKP-204ENST00000594661 SLC17A2O00624 439 aa13.4□□□□□ -0.26
PNKP-204ENST00000594661 EFSO43281 561 aa13.4□□□□□ -0.26
PNKP-204ENST00000594661 TRAPPC6AO75865 159 aa13.4□□□□□ -0.26
PNKP-204ENST00000594661 GAPDHP04406 335 aaKnown RBP13.4□□□□□ -0.26
PNKP-204ENST00000594661 TRGC1P0CF51 173 aa13.4□□□□□ -0.26
PNKP-204ENST00000594661 LMO1P25800 156 aa13.4□□□□□ -0.26
PNKP-204ENST00000594661 CHATP28329 748 aa13.4□□□□□ -0.26
PNKP-204ENST00000594661 FAM3AP98173 230 aa13.4□□□□□ -0.26
PNKP-204ENST00000594661 LINC00696Q6ZRV3 163 aa13.4□□□□□ -0.26
PNKP-204ENST00000594661 DTX1Q86Y01 620 aa13.4□□□□□ -0.26
PNKP-204ENST00000594661 FAM3DQ96BQ1 224 aa13.4□□□□□ -0.26
PNKP-204ENST00000594661 SLAMF6Q96DU3 332 aa13.4□□□□□ -0.26
PNKP-204ENST00000594661 RCC1LQ96I51 464 aaKnown RBP13.4□□□□□ -0.26
PNKP-204ENST00000594661 NCOR1P1Q9H4R4 102 aa13.4□□□□□ -0.26
PNKP-204ENST00000594661 PLA2G3Q9NZ20 509 aa13.4□□□□□ -0.26
PNKP-204ENST00000594661 ASPMQ8IZT6 3477 aa13.4□□□□□ -0.26
PNKP-204ENST00000594661 KIAA1549Q9HCM3 1950 aa13.39□□□□□ -0.27
PNKP-204ENST00000594661 MED13Q9UHV7 2174 aa13.39□□□□□ -0.27
PNKP-204ENST00000594661 CDRT15L2A8MXV6 281 aa13.39□□□□□ -0.27
PNKP-204ENST00000594661 M0QZK8 103 aa13.39□□□□□ -0.27
PNKP-204ENST00000594661 GGCTO75223 188 aaKnown RBP13.39□□□□□ -0.27
PNKP-204ENST00000594661 TRGC2P03986 189 aa13.39□□□□□ -0.27
PNKP-204ENST00000594661 ISG15P05161 165 aa13.39□□□□□ -0.27
PNKP-204ENST00000594661 GDF1P27539 372 aa13.39□□□□□ -0.27
PNKP-204ENST00000594661 CDAP32320 146 aa13.39□□□□□ -0.27
PNKP-204ENST00000594661 APLNRP35414 380 aa13.39□□□□□ -0.27
PNKP-204ENST00000594661 CSNK2A1P68400 391 aaPredicted RBP13.39□□□□□ -0.27
PNKP-204ENST00000594661 HIST3H3Q16695 136 aa13.39□□□□□ -0.27
PNKP-204ENST00000594661 C2orf76Q3KRA6 126 aa13.39□□□□□ -0.27
PNKP-204ENST00000594661 SLC25A47Q6Q0C1 308 aa13.39□□□□□ -0.27
PNKP-204ENST00000594661 GGNQ86UU5 652 aa13.39□□□□□ -0.27
PNKP-204ENST00000594661 OR9K2Q8NGE7 335 aa13.39□□□□□ -0.27
PNKP-204ENST00000594661 ABHD5Q8WTS1 349 aa13.39□□□□□ -0.27
PNKP-204ENST00000594661 CASTOR1Q8WTX7 329 aa13.39□□□□□ -0.27
PNKP-204ENST00000594661 EIF5A2Q9GZV4 153 aaKnown RBP13.39□□□□□ -0.27
PNKP-204ENST00000594661 POLR1DQ9Y2S0 133 aa13.39□□□□□ -0.27
PNKP-204ENST00000594661 LOC100289279A0A1B0GTE1 492 aa13.39□□□□□ -0.27
PNKP-204ENST00000594661 P2RY10O00398 339 aa13.39□□□□□ -0.27
PNKP-204ENST00000594661 TGOLN2O43493 480 aa13.39□□□□□ -0.27
PNKP-204ENST00000594661 GCGP01275 180 aa13.39□□□□□ -0.27
PNKP-204ENST00000594661 IGFBP3P17936 291 aaPredicted RBP13.39□□□□□ -0.27
PNKP-204ENST00000594661 FSTP19883 344 aa13.39□□□□□ -0.27
PNKP-204ENST00000594661 THBS4P35443 961 aa13.39□□□□□ -0.27
PNKP-204ENST00000594661 GNALP38405 381 aa13.39□□□□□ -0.27
PNKP-204ENST00000594661 NPY4RP50391 375 aa13.39□□□□□ -0.27
PNKP-204ENST00000594661 OR1C1Q15619 314 aa13.39□□□□□ -0.27
PNKP-204ENST00000594661 KLHL24Q6TFL4 600 aa13.39□□□□□ -0.27
PNKP-204ENST00000594661 THNSL2Q86YJ6 484 aa13.39□□□□□ -0.27
PNKP-204ENST00000594661 OR2M7Q8NG81 312 aa13.39□□□□□ -0.27
PNKP-204ENST00000594661 ZNF292O60281 2723 aa13.39□□□□□ -0.27
PNKP-204ENST00000594661 PHF3Q92576 2039 aaKnown RBP13.38□□□□□ -0.27
PNKP-204ENST00000594661 GJE1A6NN92 205 aa13.38□□□□□ -0.27
PNKP-204ENST00000594661 RPLP1P05386 114 aaKnown RBP13.38□□□□□ -0.27
PNKP-204ENST00000594661 OR51A2Q8NGJ7 313 aa13.38□□□□□ -0.27
PNKP-204ENST00000594661 KCNE4Q8WWG9 221 aa13.38□□□□□ -0.27
PNKP-204ENST00000594661 FRZBQ92765 325 aa13.38□□□□□ -0.27
PNKP-204ENST00000594661 SMDT1Q9H4I9 107 aa13.38□□□□□ -0.27
PNKP-204ENST00000594661 PITPNC1Q9UKF7 332 aa13.38□□□□□ -0.27
PNKP-204ENST00000594661 FBXO7Q9Y3I1 522 aa13.38□□□□□ -0.27
PNKP-204ENST00000594661 DCDC2BA2VCK2 349 aa13.37□□□□□ -0.27
PNKP-204ENST00000594661 LMX1BO60663 402 aa13.37□□□□□ -0.27
PNKP-204ENST00000594661 ERCC1P07992 297 aaPredicted RBP13.37□□□□□ -0.27
PNKP-204ENST00000594661 MMP16P51512 607 aa13.37□□□□□ -0.27
PNKP-204ENST00000594661 SUCLG1P53597 346 aaKnown RBP13.37□□□□□ -0.27
PNKP-204ENST00000594661 SPOCK1Q08629 439 aa13.37□□□□□ -0.27
PNKP-204ENST00000594661 GLYATL3Q5SZD4 288 aa13.37□□□□□ -0.27
PNKP-204ENST00000594661 FAM166AQ6J272 317 aa13.37□□□□□ -0.27
PNKP-204ENST00000594661 JAGN1Q8N5M9 183 aa13.37□□□□□ -0.27
PNKP-204ENST00000594661 NAXEQ8NCW5 288 aa13.37□□□□□ -0.27
PNKP-204ENST00000594661 BHLHE23Q8NDY6 225 aa13.37□□□□□ -0.27
PNKP-204ENST00000594661 OR10S1Q8NGN2 331 aa13.37□□□□□ -0.27
PNKP-204ENST00000594661 FER1L6-AS2Q96M78 137 aa13.37□□□□□ -0.27
PNKP-204ENST00000594661 FAM173AQ9BQD7 235 aa13.37□□□□□ -0.27
PNKP-204ENST00000594661 FAM206AQ9NX38 181 aa13.37□□□□□ -0.27
PNKP-204ENST00000594661 ABI3Q9P2A4 366 aa13.37□□□□□ -0.27
PNKP-204ENST00000594661 CGGBP1Q9UFW8 167 aaPredicted RBP13.37□□□□□ -0.27
PNKP-204ENST00000594661 BOKQ9UMX3 212 aaPredicted RBP13.37□□□□□ -0.27
PNKP-204ENST00000594661 LHFPL6Q9Y693 200 aa13.37□□□□□ -0.27
PNKP-204ENST00000594661 NPIPA2E9PIF3 369 aa13.37□□□□□ -0.27
PNKP-204ENST00000594661 NPIPA3F8WFD2 350 aa13.37□□□□□ -0.27
PNKP-204ENST00000594661 JTBO76095 146 aa13.37□□□□□ -0.27
PNKP-204ENST00000594661 VAMP5O95183 116 aa13.37□□□□□ -0.27
PNKP-204ENST00000594661 PET100P0DJ07 73 aa13.37□□□□□ -0.27
PNKP-204ENST00000594661 EPHA1P21709 976 aa13.37□□□□□ -0.27
PNKP-204ENST00000594661 CLDN15P56746 228 aa13.37□□□□□ -0.27
PNKP-204ENST00000594661 ERVFRD-1P60508 538 aa13.37□□□□□ -0.27
PNKP-204ENST00000594661 SRSF6Q13247 344 aaKnown RBP13.37□□□□□ -0.27
PNKP-204ENST00000594661 PHYHD1Q5SRE7 291 aa13.37□□□□□ -0.27
PNKP-204ENST00000594661 ZNF343Q6P1L6 599 aa13.37□□□□□ -0.27
PNKP-204ENST00000594661 ZNF283Q8N7M2 679 aa13.37□□□□□ -0.27
PNKP-204ENST00000594661 ADAD2Q8NCV1 583 aaKnown RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms