RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 SATL1Q86VE3 508 aa8.56□□□□□ -1.04
SDF2-208ENST00000589788 SERPINA12Q8IW75 414 aa8.56□□□□□ -1.04
SDF2-208ENST00000589788 MKXQ8IYA7 352 aa8.56□□□□□ -1.04
SDF2-208ENST00000589788 CMTM4Q8IZR5 234 aa8.56□□□□□ -1.04
SDF2-208ENST00000589788 ZFP41Q8N8Y5 198 aa8.56□□□□□ -1.04
SDF2-208ENST00000589788 ZNRF1Q8ND25 227 aa8.56□□□□□ -1.04
SDF2-208ENST00000589788 TMEM185AQ8NFB2 350 aa8.56□□□□□ -1.04
SDF2-208ENST00000589788 OR5D14Q8NGL3 314 aa8.56□□□□□ -1.04
SDF2-208ENST00000589788 SLAMF9Q96A28 289 aa8.56□□□□□ -1.04
SDF2-208ENST00000589788 YIPF6Q96EC8 236 aa8.56□□□□□ -1.04
SDF2-208ENST00000589788 PGLYRP3Q96LB9 341 aa8.56□□□□□ -1.04
SDF2-208ENST00000589788 CEP19Q96LK0 163 aa8.56□□□□□ -1.04
SDF2-208ENST00000589788 WDFY2Q96P53 400 aa8.56□□□□□ -1.04
SDF2-208ENST00000589788 CNTD2Q9H8S5 307 aa8.56□□□□□ -1.04
SDF2-208ENST00000589788 BATF3Q9NR55 127 aa8.56□□□□□ -1.04
SDF2-208ENST00000589788 ONECUT1Q9UBC0 465 aa8.56□□□□□ -1.04
SDF2-208ENST00000589788 ZNF69Q9UC07 566 aa8.56□□□□□ -1.04
SDF2-208ENST00000589788 OR14J1Q9UGF5 321 aa8.56□□□□□ -1.04
SDF2-208ENST00000589788 ZNF222Q9UK12 451 aa8.56□□□□□ -1.04
SDF2-208ENST00000589788 DHDHQ9UQ10 334 aa8.56□□□□□ -1.04
SDF2-208ENST00000589788 SIRT4Q9Y6E7 314 aaPredicted RBP8.56□□□□□ -1.04
SDF2-208ENST00000589788 IGKV1-27A0A075B6S5 117 aa8.55□□□□□ -1.04
SDF2-208ENST00000589788 IGKV1-9A0A0C4DH69 117 aa8.55□□□□□ -1.04
SDF2-208ENST00000589788 A0A1W2PQ09 198 aa8.55□□□□□ -1.04
SDF2-208ENST00000589788 AMY2AP04746 511 aa8.55□□□□□ -1.04
SDF2-208ENST00000589788 CD2P06729 351 aa8.55□□□□□ -1.04
SDF2-208ENST00000589788 SFTPBP07988 381 aa8.55□□□□□ -1.04
SDF2-208ENST00000589788 HCKP08631 526 aa8.55□□□□□ -1.04
SDF2-208ENST00000589788 IGHV4-38-2P0DP08 117 aa8.55□□□□□ -1.04
SDF2-208ENST00000589788 CD36P16671 472 aa8.55□□□□□ -1.04
SDF2-208ENST00000589788 PSMA1P25786 263 aaKnown RBP8.55□□□□□ -1.04
SDF2-208ENST00000589788 GABRA5P31644 462 aa8.55□□□□□ -1.04
SDF2-208ENST00000589788 PRDX2P32119 198 aa8.55□□□□□ -1.04
SDF2-208ENST00000589788 CAV3P56539 151 aa8.55□□□□□ -1.04
SDF2-208ENST00000589788 ARF6P62330 175 aa8.55□□□□□ -1.04
SDF2-208ENST00000589788 TRAM1Q15629 374 aa8.55□□□□□ -1.04
SDF2-208ENST00000589788 KRTAP24-1Q3LI83 254 aa8.55□□□□□ -1.04
SDF2-208ENST00000589788 FIP1L1Q6UN15 594 aaKnown RBP8.55□□□□□ -1.04
SDF2-208ENST00000589788 USP43Q70EL4 1123 aa8.55□□□□□ -1.04
SDF2-208ENST00000589788 Q8IYB0 196 aa8.55□□□□□ -1.04
SDF2-208ENST00000589788 ZNF561Q8N587 486 aa8.55□□□□□ -1.04
SDF2-208ENST00000589788 OR13C9Q8NGT0 318 aa8.55□□□□□ -1.04
SDF2-208ENST00000589788 GPR148Q8TDV2 347 aa8.55□□□□□ -1.04
SDF2-208ENST00000589788 SDSLQ96GA7 329 aa8.55□□□□□ -1.04
SDF2-208ENST00000589788 DCTN5Q9BTE1 182 aa8.55□□□□□ -1.04
SDF2-208ENST00000589788 FUNDC2Q9BWH2 189 aa8.55□□□□□ -1.04
SDF2-208ENST00000589788 ZCCHC4Q9H5U6 513 aa8.55□□□□□ -1.04
SDF2-208ENST00000589788 IFT22Q9H7X7 185 aa8.55□□□□□ -1.04
SDF2-208ENST00000589788 HES4Q9HCC6 221 aa8.55□□□□□ -1.04
SDF2-208ENST00000589788 MTCH1Q9NZJ7 389 aa8.55□□□□□ -1.04
SDF2-208ENST00000589788 NDUFA13Q9P0J0 144 aa8.55□□□□□ -1.04
SDF2-208ENST00000589788 PNMA8CA0A1B0GUJ8 204 aa8.54□□□□□ -1.04
SDF2-208ENST00000589788 SMIM31A0A1B0GVY4 71 aa8.54□□□□□ -1.04
SDF2-208ENST00000589788 DPPA5A6NC42 116 aa8.54□□□□□ -1.04
SDF2-208ENST00000589788 TRIM77I1YAP6 450 aa8.54□□□□□ -1.04
SDF2-208ENST00000589788 MAGEB3O15480 346 aa8.54□□□□□ -1.04
SDF2-208ENST00000589788 VENTXO95231 258 aa8.54□□□□□ -1.04
SDF2-208ENST00000589788 KNG1P01042 644 aa8.54□□□□□ -1.04
SDF2-208ENST00000589788 SOX2P48431 317 aa8.54□□□□□ -1.04
SDF2-208ENST00000589788 CEBPDP49716 269 aaPredicted RBP8.54□□□□□ -1.04
SDF2-208ENST00000589788 BPIFB3P59826 476 aa8.54□□□□□ -1.04
SDF2-208ENST00000589788 HILS1P60008 231 aa8.54□□□□□ -1.04
SDF2-208ENST00000589788 ERVK11-1P61568 191 aa8.54□□□□□ -1.04
SDF2-208ENST00000589788 PDCD1Q15116 288 aa8.54□□□□□ -1.04
SDF2-208ENST00000589788 TIMM50Q3ZCQ8 353 aa8.54□□□□□ -1.04
SDF2-208ENST00000589788 YIF1BQ5BJH7 314 aa8.54□□□□□ -1.04
SDF2-208ENST00000589788 ANKRD13BQ86YJ7 626 aa8.54□□□□□ -1.04
SDF2-208ENST00000589788 MS4A15Q8N5U1 240 aa8.54□□□□□ -1.04
SDF2-208ENST00000589788 PARP16Q8N5Y8 322 aa8.54□□□□□ -1.04
SDF2-208ENST00000589788 CD177Q8N6Q3 437 aa8.54□□□□□ -1.04
SDF2-208ENST00000589788 SIGLECL1Q8N7X8 197 aa8.54□□□□□ -1.04
SDF2-208ENST00000589788 LY6G5BQ8NDX9 201 aa8.54□□□□□ -1.04
SDF2-208ENST00000589788 GHSRQ92847 366 aa8.54□□□□□ -1.04
SDF2-208ENST00000589788 EMG1Q92979 244 aaKnown RBP8.54□□□□□ -1.04
SDF2-208ENST00000589788 RFT1Q96AA3 541 aa8.54□□□□□ -1.04
SDF2-208ENST00000589788 CPNE2Q96FN4 548 aaPredicted RBP8.54□□□□□ -1.04
SDF2-208ENST00000589788 SPACA5Q96QH8 159 aa8.54□□□□□ -1.04
SDF2-208ENST00000589788 C19orf24Q9BVV8 132 aa8.54□□□□□ -1.04
SDF2-208ENST00000589788 RBM38Q9H0Z9 239 aaKnown RBP8.54□□□□□ -1.04
SDF2-208ENST00000589788 SIRPDQ9H106 197 aa8.54□□□□□ -1.04
SDF2-208ENST00000589788 ELL3Q9HB65 397 aaPredicted RBP8.54□□□□□ -1.04
SDF2-208ENST00000589788 MBNL3Q9NUK0 354 aaKnown RBP8.54□□□□□ -1.04
SDF2-208ENST00000589788 MAB21L2Q9Y586 359 aa8.54□□□□□ -1.04
SDF2-208ENST00000589788 KPTNQ9Y664 436 aa8.54□□□□□ -1.04
SDF2-208ENST00000589788 COL6A5A8TX70 2615 aa8.54□□□□□ -1.04
SDF2-208ENST00000589788 SPRY1O43609 319 aaPredicted RBP8.54□□□□□ -1.04
SDF2-208ENST00000589788 SULT1B1O43704 296 aa8.54□□□□□ -1.04
SDF2-208ENST00000589788 GABARAPO95166 117 aa8.54□□□□□ -1.04
SDF2-208ENST00000589788 MMP9P14780 707 aa8.54□□□□□ -1.04
SDF2-208ENST00000589788 RAB3AP20336 220 aa8.54□□□□□ -1.04
SDF2-208ENST00000589788 BCL3P20749 454 aa8.54□□□□□ -1.04
SDF2-208ENST00000589788 GALP22466 123 aa8.54□□□□□ -1.04
SDF2-208ENST00000589788 GADD45AP24522 165 aa8.54□□□□□ -1.04
SDF2-208ENST00000589788 RPS25P62851 125 aaKnown RBP8.54□□□□□ -1.04
SDF2-208ENST00000589788 PDZK1IP1Q13113 114 aa8.54□□□□□ -1.04
SDF2-208ENST00000589788 GPR107Q5VW38 600 aa8.54□□□□□ -1.04
SDF2-208ENST00000589788 CD200R1LQ6Q8B3 271 aa8.54□□□□□ -1.04
SDF2-208ENST00000589788 BRD3OSQ6XYD6 125 aa8.54□□□□□ -1.04
SDF2-208ENST00000589788 SLC16A12Q6ZSM3 486 aa8.54□□□□□ -1.04
SDF2-208ENST00000589788 VMO1Q7Z5L0 202 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms