RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 RAB40AQ8WXH6 277 aa15.3■□□□□ 0.04
RFFL-211ENST00000584541 CCL13Q99616 98 aa15.3■□□□□ 0.04
RFFL-211ENST00000584541 MMP27Q9H306 513 aa15.3■□□□□ 0.04
RFFL-211ENST00000584541 NARFLQ9H6Q4 476 aa15.3■□□□□ 0.04
RFFL-211ENST00000584541 ADAM30Q9UKF2 790 aa15.3■□□□□ 0.04
RFFL-211ENST00000584541 A3GALT2U3KPV4 340 aa15.3■□□□□ 0.04
RFFL-211ENST00000584541 TACC2O95359 2948 aa15.29■□□□□ 0.04
RFFL-211ENST00000584541 CEACAM18A8MTB9 384 aa15.29■□□□□ 0.04
RFFL-211ENST00000584541 SIRPB1O00241 398 aa15.29■□□□□ 0.04
RFFL-211ENST00000584541 OR2H2O95918 312 aa15.29■□□□□ 0.04
RFFL-211ENST00000584541 RPS2P15880 293 aaKnown RBP15.29■□□□□ 0.04
RFFL-211ENST00000584541 VEGFCP49767 419 aa15.29■□□□□ 0.04
RFFL-211ENST00000584541 COL10A1Q03692 680 aa15.29■□□□□ 0.04
RFFL-211ENST00000584541 PLA2G7Q13093 441 aa15.29■□□□□ 0.04
RFFL-211ENST00000584541 PDCD1Q15116 288 aa15.29■□□□□ 0.04
RFFL-211ENST00000584541 ATAD3CQ5T2N8 411 aa15.29■□□□□ 0.04
RFFL-211ENST00000584541 RAB12Q6IQ22 244 aa15.29■□□□□ 0.04
RFFL-211ENST00000584541 Q6P435 159 aa15.29■□□□□ 0.04
RFFL-211ENST00000584541 FAM89BQ8N5H3 189 aa15.29■□□□□ 0.04
RFFL-211ENST00000584541 CD177Q8N6Q3 437 aa15.29■□□□□ 0.04
RFFL-211ENST00000584541 ASCC1Q8N9N2 400 aaKnown RBP15.29■□□□□ 0.04
RFFL-211ENST00000584541 S100A16Q96FQ6 103 aaKnown RBP15.29■□□□□ 0.04
RFFL-211ENST00000584541 SDSLQ96GA7 329 aa15.29■□□□□ 0.04
RFFL-211ENST00000584541 NEDD4LQ96PU5 975 aa15.29■□□□□ 0.04
RFFL-211ENST00000584541 NICN1Q9BSH3 213 aa15.29■□□□□ 0.04
RFFL-211ENST00000584541 NXF2Q9GZY0 626 aaKnown RBP15.29■□□□□ 0.04
RFFL-211ENST00000584541 ABCG5Q9H222 651 aa15.29■□□□□ 0.04
RFFL-211ENST00000584541 IFT22Q9H7X7 185 aa15.29■□□□□ 0.04
RFFL-211ENST00000584541 DIABLOQ9NR28 239 aa15.29■□□□□ 0.04
RFFL-211ENST00000584541 KAAG1Q9UBP8 84 aa15.29■□□□□ 0.04
RFFL-211ENST00000584541 ZNF222Q9UK12 451 aa15.29■□□□□ 0.04
RFFL-211ENST00000584541 FAM25AB3EWG3 89 aa15.28■□□□□ 0.04
RFFL-211ENST00000584541 FAM25CB3EWG5 89 aa15.28■□□□□ 0.04
RFFL-211ENST00000584541 FAM25GB3EWG6 89 aa15.28■□□□□ 0.04
RFFL-211ENST00000584541 SIGLEC5O15389 551 aa15.28■□□□□ 0.04
RFFL-211ENST00000584541 HPGDSO60760 199 aa15.28■□□□□ 0.04
RFFL-211ENST00000584541 APOA1P02647 267 aa15.28■□□□□ 0.04
RFFL-211ENST00000584541 HEXAP06865 529 aa15.28■□□□□ 0.04
RFFL-211ENST00000584541 LMO1P25800 156 aa15.28■□□□□ 0.04
RFFL-211ENST00000584541 BLVRBP30043 206 aaPredicted RBP15.28■□□□□ 0.04
RFFL-211ENST00000584541 S100A5P33763 92 aa15.28■□□□□ 0.04
RFFL-211ENST00000584541 OR8B3Q8NGG8 313 aa15.28■□□□□ 0.04
RFFL-211ENST00000584541 RAB39BQ96DA2 213 aa15.28■□□□□ 0.04
RFFL-211ENST00000584541 SLC25A38Q96DW6 304 aa15.28■□□□□ 0.04
RFFL-211ENST00000584541 NEIL1Q96FI4 390 aaPredicted RBP15.28■□□□□ 0.04
RFFL-211ENST00000584541 GAFA1Q96PS6 74 aa15.28■□□□□ 0.04
RFFL-211ENST00000584541 OR8B2Q96RD0 313 aa15.28■□□□□ 0.04
RFFL-211ENST00000584541 A0A0A6YYH2 397 aa15.27■□□□□ 0.04
RFFL-211ENST00000584541 A6NJ64 397 aa15.27■□□□□ 0.04
RFFL-211ENST00000584541 TNFRSF13BO14836 293 aaPredicted RBP15.27■□□□□ 0.04
RFFL-211ENST00000584541 NDUFB3O43676 98 aa15.27■□□□□ 0.04
RFFL-211ENST00000584541 PDCD6O75340 191 aa15.27■□□□□ 0.04
RFFL-211ENST00000584541 TFF1P04155 84 aa15.27■□□□□ 0.04
RFFL-211ENST00000584541 FUT3P21217 361 aa15.27■□□□□ 0.04
RFFL-211ENST00000584541 RBM39Q14498 530 aaKnown RBP15.27■□□□□ 0.04
RFFL-211ENST00000584541 PAN3Q58A45 887 aaKnown RBP15.27■□□□□ 0.04
RFFL-211ENST00000584541 LRRC10Q5BKY1 277 aa15.27■□□□□ 0.04
RFFL-211ENST00000584541 LYPD2Q6UXB3 125 aa15.27■□□□□ 0.04
RFFL-211ENST00000584541 CMTM4Q8IZR5 234 aa15.27■□□□□ 0.04
RFFL-211ENST00000584541 TMEM185AQ8NFB2 350 aa15.27■□□□□ 0.04
RFFL-211ENST00000584541 OR10R2Q8NGX6 335 aa15.27■□□□□ 0.04
RFFL-211ENST00000584541 SNX22Q96L94 193 aa15.27■□□□□ 0.04
RFFL-211ENST00000584541 Q96MF0 132 aa15.27■□□□□ 0.04
RFFL-211ENST00000584541 FAM234AQ9H0X4 552 aa15.27■□□□□ 0.04
RFFL-211ENST00000584541 PATZ1Q9HBE1 687 aaKnown RBP15.27■□□□□ 0.04
RFFL-211ENST00000584541 PLEKHJ1Q9NW61 149 aa15.27■□□□□ 0.04
RFFL-211ENST00000584541 PTTG2Q9NZH5 202 aa15.27■□□□□ 0.04
RFFL-211ENST00000584541 ITGB1BP2Q9UKP3 347 aa15.27■□□□□ 0.04
RFFL-211ENST00000584541 PEX16Q9Y5Y5 336 aa15.27■□□□□ 0.04
RFFL-211ENST00000584541 NOTCH2Q04721 2471 aa15.27■□□□□ 0.03
RFFL-211ENST00000584541 A0A0A6YYD4 124 aa15.26■□□□□ 0.03
RFFL-211ENST00000584541 MCRIP1C9JLW8 97 aa15.26■□□□□ 0.03
RFFL-211ENST00000584541 SLC33A1O00400 549 aaPredicted RBP15.26■□□□□ 0.03
RFFL-211ENST00000584541 CTDSP2O14595 271 aa15.26■□□□□ 0.03
RFFL-211ENST00000584541 SOCS1O15524 211 aa15.26■□□□□ 0.03
RFFL-211ENST00000584541 GLAP06280 429 aa15.26■□□□□ 0.03
RFFL-211ENST00000584541 EIF4EP06730 217 aaKnown RBP15.26■□□□□ 0.03
RFFL-211ENST00000584541 AMY2BP19961 511 aa15.26■□□□□ 0.03
RFFL-211ENST00000584541 USF1P22415 310 aaPredicted RBP15.26■□□□□ 0.03
RFFL-211ENST00000584541 TALDO1P37837 337 aa15.26■□□□□ 0.03
RFFL-211ENST00000584541 ARL6IP1Q15041 203 aa15.26■□□□□ 0.03
RFFL-211ENST00000584541 NKAPLQ5M9Q1 402 aa15.26■□□□□ 0.03
RFFL-211ENST00000584541 METAP1DQ6UB28 335 aaPredicted RBP15.26■□□□□ 0.03
RFFL-211ENST00000584541 Q6ZTK2 550 aa15.26■□□□□ 0.03
RFFL-211ENST00000584541 FAM216BQ8N7L0 139 aa15.26■□□□□ 0.03
RFFL-211ENST00000584541 SUMF2Q8NBJ7 301 aa15.26■□□□□ 0.03
RFFL-211ENST00000584541 ZNRF1Q8ND25 227 aa15.26■□□□□ 0.03
RFFL-211ENST00000584541 OR5D13Q8NGL4 314 aa15.26■□□□□ 0.03
RFFL-211ENST00000584541 CLDND2Q8NHS1 167 aa15.26■□□□□ 0.03
RFFL-211ENST00000584541 NEK7Q8TDX7 302 aa15.26■□□□□ 0.03
RFFL-211ENST00000584541 RAB3CQ96E17 227 aa15.26■□□□□ 0.03
RFFL-211ENST00000584541 NUDT16L1Q9BRJ7 211 aaKnown RBP15.26■□□□□ 0.03
RFFL-211ENST00000584541 DPCDQ9BVM2 203 aaPredicted RBP15.26■□□□□ 0.03
RFFL-211ENST00000584541 METRNQ9UJH8 293 aa15.26■□□□□ 0.03
RFFL-211ENST00000584541 MAB21L2Q9Y586 359 aa15.26■□□□□ 0.03
RFFL-211ENST00000584541 POLQO75417 2590 aa15.26■□□□□ 0.03
RFFL-211ENST00000584541 TRAV24A0A0B4J272 114 aa15.25■□□□□ 0.03
RFFL-211ENST00000584541 K7N7A8 449 aa15.25■□□□□ 0.03
RFFL-211ENST00000584541 HSPB6O14558 160 aa15.25■□□□□ 0.03
RFFL-211ENST00000584541 CLPXO76031 633 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 141.8 ms